RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 KRTAP29-1A8MX34 341 aaPredicted RBP11□□□□□ -0.65
EFCAB11-202ENST00000538485 FAM236AA0A1B0GUQ0 79 aa10.98□□□□□ -0.65
EFCAB11-202ENST00000538485 FAM236BA0A1B0GV22 79 aa10.98□□□□□ -0.65
EFCAB11-202ENST00000538485 A0A1B0GVX0 72 aa10.98□□□□□ -0.65
EFCAB11-202ENST00000538485 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
EFCAB11-202ENST00000538485 IGHV6-1A0A0B4J1U7 121 aa10.97□□□□□ -0.65
EFCAB11-202ENST00000538485 NOTCH2NLQ7Z3S9 236 aa10.93□□□□□ -0.66
EFCAB11-202ENST00000538485 PCLOQ9Y6V0 5065 aa10.93□□□□□ -0.66
EFCAB11-202ENST00000538485 HCG22E2RYF7 251 aa10.93□□□□□ -0.66
EFCAB11-202ENST00000538485 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
EFCAB11-202ENST00000538485 MMP24-AS1A0A0U1RRL7 71 aa10.91□□□□□ -0.66
EFCAB11-202ENST00000538485 WFDC13Q8IUB5 93 aa10.9□□□□□ -0.66
EFCAB11-202ENST00000538485 C8orf17Q9NRJ1 99 aa10.9□□□□□ -0.66
EFCAB11-202ENST00000538485 CASC2Q6XLA1 102 aa10.87□□□□□ -0.67
EFCAB11-202ENST00000538485 hDV103S1A0JD37 113 aa10.85□□□□□ -0.67
EFCAB11-202ENST00000538485 J3QL48 77 aa10.84□□□□□ -0.67
EFCAB11-202ENST00000538485 LINC00313P59037 77 aa10.84□□□□□ -0.67
EFCAB11-202ENST00000538485 C8orf87E5RJ46 101 aa10.83□□□□□ -0.68
EFCAB11-202ENST00000538485 ATOX1O00244 68 aa10.81□□□□□ -0.68
EFCAB11-202ENST00000538485 FP248Q71RG6 208 aaPredicted RBP10.78□□□□□ -0.68
EFCAB11-202ENST00000538485 TMEM254Q8TBM7 123 aa10.76□□□□□ -0.69
EFCAB11-202ENST00000538485 MRPL34Q9BQ48 92 aaKnown RBP10.76□□□□□ -0.69
EFCAB11-202ENST00000538485 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
EFCAB11-202ENST00000538485 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
EFCAB11-202ENST00000538485 ANAPC13Q9BS18 74 aa10.74□□□□□ -0.69
EFCAB11-202ENST00000538485 OCR1Q9BZK8 76 aa10.74□□□□□ -0.69
EFCAB11-202ENST00000538485 IGLV7-46A0A075B6I9 117 aa10.73□□□□□ -0.69
EFCAB11-202ENST00000538485 PRR4Q16378 134 aa10.71□□□□□ -0.69
EFCAB11-202ENST00000538485 SMIM20Q8N5G0 67 aa10.68□□□□□ -0.7
EFCAB11-202ENST00000538485 Q8N9P0 234 aaPredicted RBP10.68□□□□□ -0.7
EFCAB11-202ENST00000538485 TRAV7A0A075B6U4 112 aa10.68□□□□□ -0.7
EFCAB11-202ENST00000538485 NDUFS5O43920 106 aa10.68□□□□□ -0.7
EFCAB11-202ENST00000538485 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
EFCAB11-202ENST00000538485 HERC1Q15751 4861 aa10.67□□□□□ -0.7
EFCAB11-202ENST00000538485 PCP4P48539 62 aa10.66□□□□□ -0.7
EFCAB11-202ENST00000538485 KRTAP13-3Q3SY46 172 aa10.64□□□□□ -0.71
EFCAB11-202ENST00000538485 LPAP08519 4548 aa10.62□□□□□ -0.71
EFCAB11-202ENST00000538485 COX7CP15954 63 aa10.61□□□□□ -0.71
EFCAB11-202ENST00000538485 TP53AIP1Q9HCN2 124 aa10.61□□□□□ -0.71
EFCAB11-202ENST00000538485 UQCRQO14949 82 aa10.59□□□□□ -0.71
EFCAB11-202ENST00000538485 C20orf166-AS1Q96NR2 134 aa10.58□□□□□ -0.72
EFCAB11-202ENST00000538485 A8MUU9 505 aa10.56□□□□□ -0.72
EFCAB11-202ENST00000538485 TPRXLQ17RH7 258 aa10.56□□□□□ -0.72
EFCAB11-202ENST00000538485 Q5W150 140 aa10.55□□□□□ -0.72
EFCAB11-202ENST00000538485 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
EFCAB11-202ENST00000538485 XP32Q5T750 250 aa10.54□□□□□ -0.72
EFCAB11-202ENST00000538485 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
EFCAB11-202ENST00000538485 LRP2P98164 4655 aa10.53□□□□□ -0.72
EFCAB11-202ENST00000538485 TRAV22A0A0B4J277 110 aa10.53□□□□□ -0.72
EFCAB11-202ENST00000538485 Q75L30 129 aa10.51□□□□□ -0.73
EFCAB11-202ENST00000538485 C20orf197Q8N268 126 aa10.51□□□□□ -0.73
EFCAB11-202ENST00000538485 H0Y9P7 68 aa10.5□□□□□ -0.73
EFCAB11-202ENST00000538485 MP68P56378 58 aa10.47□□□□□ -0.73
EFCAB11-202ENST00000538485 SNURFQ9Y675 71 aa10.46□□□□□ -0.74
EFCAB11-202ENST00000538485 ZCCHC13Q8WW36 166 aaKnown RBP10.45□□□□□ -0.74
EFCAB11-202ENST00000538485 LINC00208Q96KT6 92 aa10.44□□□□□ -0.74
EFCAB11-202ENST00000538485 HMCN2Q8NDA2 5059 aa10.44□□□□□ -0.74
EFCAB11-202ENST00000538485 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
EFCAB11-202ENST00000538485 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
EFCAB11-202ENST00000538485 KLKP1Q107X0 134 aa10.42□□□□□ -0.74
EFCAB11-202ENST00000538485 CYSTM1Q9H1C7 97 aa10.42□□□□□ -0.74
EFCAB11-202ENST00000538485 C1orf64Q8NEQ6 169 aa10.4□□□□□ -0.74
EFCAB11-202ENST00000538485 H3BPC8 53 aa10.39□□□□□ -0.75
EFCAB11-202ENST00000538485 ATP11AUNQ6ZP68 121 aa10.36□□□□□ -0.75
EFCAB11-202ENST00000538485 LOC101927531A0A1B0GV80 90 aa10.32□□□□□ -0.76
EFCAB11-202ENST00000538485 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
EFCAB11-202ENST00000538485 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
EFCAB11-202ENST00000538485 IGKV2D-30A0A075B6S6 120 aa10.3□□□□□ -0.76
EFCAB11-202ENST00000538485 H7BZZ5 65 aa10.27□□□□□ -0.76
EFCAB11-202ENST00000538485 PCOTHQ58A44 107 aa10.27□□□□□ -0.76
EFCAB11-202ENST00000538485 NDUFC1O43677 76 aa10.25□□□□□ -0.77
EFCAB11-202ENST00000538485 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
EFCAB11-202ENST00000538485 SPINK7P58062 85 aa10.22□□□□□ -0.77
EFCAB11-202ENST00000538485 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
EFCAB11-202ENST00000538485 HRES1P13985 223 aa10.13□□□□□ -0.79
EFCAB11-202ENST00000538485 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
EFCAB11-202ENST00000538485 TMEM258P61165 79 aa10.1□□□□□ -0.79
EFCAB11-202ENST00000538485 MUC2Q02817 5179 aa10.09□□□□□ -0.79
EFCAB11-202ENST00000538485 SPANXA2-OT1Q8N9U9 137 aa10.08□□□□□ -0.8
EFCAB11-202ENST00000538485 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
EFCAB11-202ENST00000538485 UBR4Q5T4S7 5183 aa10.04□□□□□ -0.8
EFCAB11-202ENST00000538485 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
EFCAB11-202ENST00000538485 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
EFCAB11-202ENST00000538485 KRTAP4-1Q9BYQ7 146 aa10.04□□□□□ -0.8
EFCAB11-202ENST00000538485 ATP5EP56381 51 aaPredicted RBP9.97□□□□□ -0.81
EFCAB11-202ENST00000538485 DMAC1Q96GE9 116 aa9.93□□□□□ -0.82
EFCAB11-202ENST00000538485 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
EFCAB11-202ENST00000538485 MPLKIPQ8TAP9 179 aa9.93□□□□□ -0.82
EFCAB11-202ENST00000538485 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
EFCAB11-202ENST00000538485 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
EFCAB11-202ENST00000538485 A8MUN3 132 aa9.85□□□□□ -0.83
EFCAB11-202ENST00000538485 ACYP2P14621 99 aa9.85□□□□□ -0.83
EFCAB11-202ENST00000538485 RBM12B-AS1Q9P1G2 102 aa9.84□□□□□ -0.83
EFCAB11-202ENST00000538485 COA5Q86WW8 74 aa9.79□□□□□ -0.84
EFCAB11-202ENST00000538485 SERP1Q9Y6X1 66 aa9.79□□□□□ -0.84
EFCAB11-202ENST00000538485 KRTAP19-2Q3LHN2 52 aa9.74□□□□□ -0.85
EFCAB11-202ENST00000538485 H1FX-AS1Q4G0G2 97 aa9.72□□□□□ -0.85
EFCAB11-202ENST00000538485 RPS28P62857 69 aaKnown RBP9.7□□□□□ -0.86
EFCAB11-202ENST00000538485 CHKB-CPT1BH3BT56 60 aa9.68□□□□□ -0.86
EFCAB11-202ENST00000538485 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms