RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 TNP1P09430 55 aa6.52□□□□□ -1.36
POLR1B-216ENST00000537335 DMXL1Q9Y485 3027 aa6.52□□□□□ -1.37
POLR1B-216ENST00000537335 KRTAP13-1Q8IUC0 172 aa6.52□□□□□ -1.37
POLR1B-216ENST00000537335 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
POLR1B-216ENST00000537335 FLNCQ14315 2725 aa6.47□□□□□ -1.37
POLR1B-216ENST00000537335 LOC400499M0QZD8 3231 aa6.47□□□□□ -1.37
POLR1B-216ENST00000537335 COL12A1Q99715 3063 aa6.47□□□□□ -1.37
POLR1B-216ENST00000537335 USP34Q70CQ2 3546 aa6.46□□□□□ -1.37
POLR1B-216ENST00000537335 KALRNO60229 2985 aa6.46□□□□□ -1.38
POLR1B-216ENST00000537335 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
POLR1B-216ENST00000537335 ZZEF1O43149 2961 aa6.45□□□□□ -1.38
POLR1B-216ENST00000537335 NSD1Q96L73 2696 aaPredicted RBP6.43□□□□□ -1.38
POLR1B-216ENST00000537335 TEX15Q9BXT5 2789 aa6.43□□□□□ -1.38
POLR1B-216ENST00000537335 CFAP47Q6ZTR5 3102 aa6.42□□□□□ -1.38
POLR1B-216ENST00000537335 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
POLR1B-216ENST00000537335 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
POLR1B-216ENST00000537335 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
POLR1B-216ENST00000537335 LRBAP50851 2863 aa6.39□□□□□ -1.39
POLR1B-216ENST00000537335 MUC3AQ02505 3323 aa6.38□□□□□ -1.39
POLR1B-216ENST00000537335 TACC2O95359 2948 aa6.37□□□□□ -1.39
POLR1B-216ENST00000537335 Q6ZRN7 208 aaPredicted RBP6.36□□□□□ -1.39
POLR1B-216ENST00000537335 UBR5O95071 2799 aaPredicted RBP6.35□□□□□ -1.39
POLR1B-216ENST00000537335 SETXQ7Z333 2677 aaKnown RBP6.33□□□□□ -1.4
POLR1B-216ENST00000537335 APCP25054 2843 aa6.28□□□□□ -1.4
POLR1B-216ENST00000537335 UTP20O75691 2785 aaKnown RBP6.28□□□□□ -1.4
POLR1B-216ENST00000537335 WDFY3Q8IZQ1 3526 aa6.28□□□□□ -1.4
POLR1B-216ENST00000537335 Q5VSD8 79 aa6.25□□□□□ -1.41
POLR1B-216ENST00000537335 ITPR2Q14571 2701 aa6.24□□□□□ -1.41
POLR1B-216ENST00000537335 DMDP11532 3685 aa6.24□□□□□ -1.41
POLR1B-216ENST00000537335 ASH1LQ9NR48 2969 aaKnown RBP6.22□□□□□ -1.41
POLR1B-216ENST00000537335 TPRXLQ17RH7 258 aa6.21□□□□□ -1.41
POLR1B-216ENST00000537335 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.42
POLR1B-216ENST00000537335 ZANQ9Y493 2812 aa6.21□□□□□ -1.42
POLR1B-216ENST00000537335 LAMA5O15230 3695 aa6.2□□□□□ -1.42
POLR1B-216ENST00000537335 DCHS1Q96JQ0 3298 aa6.2□□□□□ -1.42
POLR1B-216ENST00000537335 RELNP78509 3460 aa6.18□□□□□ -1.42
POLR1B-216ENST00000537335 KRTAP13-3Q3SY46 172 aa6.17□□□□□ -1.42
POLR1B-216ENST00000537335 CRYBG3Q68DQ2 2970 aa6.16□□□□□ -1.42
POLR1B-216ENST00000537335 HRNRQ86YZ3 2850 aaPredicted RBP6.13□□□□□ -1.43
POLR1B-216ENST00000537335 ZFHX4Q86UP3 3567 aa6.08□□□□□ -1.44
POLR1B-216ENST00000537335 CELSR2Q9HCU4 2923 aa6.08□□□□□ -1.44
POLR1B-216ENST00000537335 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
POLR1B-216ENST00000537335 HIVEP1P15822 2718 aa6.07□□□□□ -1.44
POLR1B-216ENST00000537335 KMT2BQ9UMN6 2715 aaPredicted RBP6.06□□□□□ -1.44
POLR1B-216ENST00000537335 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
POLR1B-216ENST00000537335 NF1P21359 2839 aa6.05□□□□□ -1.44
POLR1B-216ENST00000537335 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
POLR1B-216ENST00000537335 TGP01266 2768 aa6.02□□□□□ -1.45
POLR1B-216ENST00000537335 FBN2P35556 2912 aa6.01□□□□□ -1.45
POLR1B-216ENST00000537335 NIPBLQ6KC79 2804 aaeCLIP6.01□□□□□ -1.45
POLR1B-216ENST00000537335 KRTAP1-4P0C5Y4 121 aa6□□□□□ -1.45
POLR1B-216ENST00000537335 INE1O15225 51 aa5.96□□□□□ -1.45
POLR1B-216ENST00000537335 KRTAP12-1P59990 96 aa5.96□□□□□ -1.45
POLR1B-216ENST00000537335 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
POLR1B-216ENST00000537335 XP32Q5T750 250 aa5.95□□□□□ -1.46
POLR1B-216ENST00000537335 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
POLR1B-216ENST00000537335 MXRA5Q9NR99 2828 aa5.91□□□□□ -1.46
POLR1B-216ENST00000537335 SMG1Q96Q15 3661 aaKnown RBP5.88□□□□□ -1.47
POLR1B-216ENST00000537335 CELSR1Q9NYQ6 3014 aa5.81□□□□□ -1.48
POLR1B-216ENST00000537335 TENM3Q9P273 2699 aa5.8□□□□□ -1.48
POLR1B-216ENST00000537335 TENM4Q6N022 2769 aa5.8□□□□□ -1.48
POLR1B-216ENST00000537335 CSMD1Q96PZ7 3565 aa5.8□□□□□ -1.48
POLR1B-216ENST00000537335 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
POLR1B-216ENST00000537335 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
POLR1B-216ENST00000537335 A0A1B0GVY2 172 aa5.76□□□□□ -1.49
POLR1B-216ENST00000537335 SVEP1Q4LDE5 3571 aa5.76□□□□□ -1.49
POLR1B-216ENST00000537335 KRTAP10-6P60371 365 aaPredicted RBP5.74□□□□□ -1.49
POLR1B-216ENST00000537335 TENM1Q9UKZ4 2725 aa5.71□□□□□ -1.5
POLR1B-216ENST00000537335 SPENQ96T58 3664 aaKnown RBP5.71□□□□□ -1.5
POLR1B-216ENST00000537335 PDZD2O15018 2839 aa5.7□□□□□ -1.5
POLR1B-216ENST00000537335 NBPF19A0A087WUL8 3843 aa5.69□□□□□ -1.5
POLR1B-216ENST00000537335 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
POLR1B-216ENST00000537335 CUBNO60494 3623 aa5.66□□□□□ -1.5
POLR1B-216ENST00000537335 OTOGQ6ZRI0 2925 aa5.65□□□□□ -1.5
POLR1B-216ENST00000537335 CSMD2Q7Z408 3487 aa5.63□□□□□ -1.51
POLR1B-216ENST00000537335 BSNQ9UPA5 3926 aa5.61□□□□□ -1.51
POLR1B-216ENST00000537335 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
POLR1B-216ENST00000537335 ZFHX3Q15911 3703 aa5.61□□□□□ -1.51
POLR1B-216ENST00000537335 FBN1P35555 2871 aaKnown RBP5.6□□□□□ -1.51
POLR1B-216ENST00000537335 VWFP04275 2813 aa5.6□□□□□ -1.51
POLR1B-216ENST00000537335 SRRM2Q9UQ35 2752 aaKnown RBP5.58□□□□□ -1.52
POLR1B-216ENST00000537335 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
POLR1B-216ENST00000537335 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
POLR1B-216ENST00000537335 KRTAP3-3Q9BYR6 98 aa5.36□□□□□ -1.55
POLR1B-216ENST00000537335 TRRAPQ9Y4A5 3859 aa5.35□□□□□ -1.55
POLR1B-216ENST00000537335 VPS13CQ709C8 3753 aa5.34□□□□□ -1.56
POLR1B-216ENST00000537335 ANK3Q12955 4377 aaKnown RBP5.33□□□□□ -1.56
POLR1B-216ENST00000537335 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
POLR1B-216ENST00000537335 ZNF469Q96JG9 3925 aaPredicted RBP5.23□□□□□ -1.57
POLR1B-216ENST00000537335 MEGF8Q7Z7M0 2845 aa5.22□□□□□ -1.57
POLR1B-216ENST00000537335 FBN3Q75N90 2809 aa5.19□□□□□ -1.58
POLR1B-216ENST00000537335 KRTAP12-3P60328 96 aa5.15□□□□□ -1.58
POLR1B-216ENST00000537335 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
POLR1B-216ENST00000537335 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
POLR1B-216ENST00000537335 AKAP9Q99996 3911 aa5.07□□□□□ -1.6
POLR1B-216ENST00000537335 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
POLR1B-216ENST00000537335 HUWE1Q7Z6Z7 4374 aaKnown RBP4.98□□□□□ -1.61
POLR1B-216ENST00000537335 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
POLR1B-216ENST00000537335 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
POLR1B-216ENST00000537335 LORP23490 312 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms