RNA–Protein interactions for RNA: ENST00000536461.5

KDM4B-203, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 5,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-203ENST00000536461 DMXL1Q9Y485 3027 aa9.39□□□□□ -0.91
KDM4B-203ENST00000536461 RPS29P62273 56 aaKnown RBP9.37□□□□□ -0.91
KDM4B-203ENST00000536461 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
KDM4B-203ENST00000536461 ROMO1P60602 79 aa9.36□□□□□ -0.91
KDM4B-203ENST00000536461 H1FX-AS1Q4G0G2 97 aa9.35□□□□□ -0.91
KDM4B-203ENST00000536461 NOTCH2NLQ7Z3S9 236 aa9.35□□□□□ -0.91
KDM4B-203ENST00000536461 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
KDM4B-203ENST00000536461 DCHS2Q6V1P9 2916 aa9.33□□□□□ -0.92
KDM4B-203ENST00000536461 KRTAP7-1Q8IUC3 87 aa9.3□□□□□ -0.92
KDM4B-203ENST00000536461 ASH1LQ9NR48 2969 aaKnown RBP9.3□□□□□ -0.92
KDM4B-203ENST00000536461 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
KDM4B-203ENST00000536461 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
KDM4B-203ENST00000536461 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
KDM4B-203ENST00000536461 R4GN34 69 aa9.26□□□□□ -0.93
KDM4B-203ENST00000536461 DNAH14Q0VDD8 3507 aa9.24□□□□□ -0.93
KDM4B-203ENST00000536461 NF1P21359 2839 aa9.2□□□□□ -0.94
KDM4B-203ENST00000536461 A0A0A0MQY5 61 aa9.19□□□□□ -0.94
KDM4B-203ENST00000536461 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
KDM4B-203ENST00000536461 CFAP47Q6ZTR5 3102 aa9.18□□□□□ -0.94
KDM4B-203ENST00000536461 KRTAP13-2Q52LG2 175 aa9.15□□□□□ -0.94
KDM4B-203ENST00000536461 USP34Q70CQ2 3546 aa9.15□□□□□ -0.95
KDM4B-203ENST00000536461 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
KDM4B-203ENST00000536461 SPTBN5Q9NRC6 3674 aaKnown RBP9.09□□□□□ -0.95
KDM4B-203ENST00000536461 TENM1Q9UKZ4 2725 aa9.08□□□□□ -0.96
KDM4B-203ENST00000536461 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
KDM4B-203ENST00000536461 M0QZ58 72 aa9.06□□□□□ -0.96
KDM4B-203ENST00000536461 HRNRQ86YZ3 2850 aaPredicted RBP9.05□□□□□ -0.96
KDM4B-203ENST00000536461 SPEGQ15772 3267 aa9.02□□□□□ -0.96
KDM4B-203ENST00000536461 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
KDM4B-203ENST00000536461 FBN2P35556 2912 aa9□□□□□ -0.97
KDM4B-203ENST00000536461 PLAC4Q8WY50 150 aa8.99□□□□□ -0.97
KDM4B-203ENST00000536461 KRTAP16-1A8MUX0 517 aa8.99□□□□□ -0.97
KDM4B-203ENST00000536461 LOC400499M0QZD8 3231 aa8.94□□□□□ -0.98
KDM4B-203ENST00000536461 C20orf166-AS1Q96NR2 134 aa8.9□□□□□ -0.98
KDM4B-203ENST00000536461 PKD1L1Q8TDX9 2849 aa8.9□□□□□ -0.99
KDM4B-203ENST00000536461 NDUFAF8A1L188 74 aa8.9□□□□□ -0.99
KDM4B-203ENST00000536461 A8MUU9 505 aa8.88□□□□□ -0.99
KDM4B-203ENST00000536461 KRTAP1-4P0C5Y4 121 aa8.82□□□□□ -1
KDM4B-203ENST00000536461 DCHS1Q96JQ0 3298 aa8.81□□□□□ -1
KDM4B-203ENST00000536461 CELSR1Q9NYQ6 3014 aa8.76□□□□□ -1.01
KDM4B-203ENST00000536461 PDZD2O15018 2839 aa8.73□□□□□ -1.01
KDM4B-203ENST00000536461 MYO15AQ9UKN7 3530 aa8.73□□□□□ -1.01
KDM4B-203ENST00000536461 XP32Q5T750 250 aa8.7□□□□□ -1.02
KDM4B-203ENST00000536461 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
KDM4B-203ENST00000536461 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
KDM4B-203ENST00000536461 H0YAA0 97 aa8.65□□□□□ -1.02
KDM4B-203ENST00000536461 VWFP04275 2813 aa8.63□□□□□ -1.03
KDM4B-203ENST00000536461 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
KDM4B-203ENST00000536461 RELNP78509 3460 aa8.6□□□□□ -1.03
KDM4B-203ENST00000536461 TGP01266 2768 aa8.58□□□□□ -1.04
KDM4B-203ENST00000536461 C10orf95Q9H7T3 257 aa8.56□□□□□ -1.04
KDM4B-203ENST00000536461 FBN1P35555 2871 aaKnown RBP8.51□□□□□ -1.05
KDM4B-203ENST00000536461 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
KDM4B-203ENST00000536461 KRTAP13-3Q3SY46 172 aa8.48□□□□□ -1.05
KDM4B-203ENST00000536461 TNP1P09430 55 aa8.45□□□□□ -1.06
KDM4B-203ENST00000536461 ZFHX3Q15911 3703 aa8.4□□□□□ -1.07
KDM4B-203ENST00000536461 P0C880 135 aa8.39□□□□□ -1.07
KDM4B-203ENST00000536461 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
KDM4B-203ENST00000536461 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
KDM4B-203ENST00000536461 NBPF19A0A087WUL8 3843 aa8.37□□□□□ -1.07
KDM4B-203ENST00000536461 SRRM2Q9UQ35 2752 aaKnown RBP8.37□□□□□ -1.07
KDM4B-203ENST00000536461 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
KDM4B-203ENST00000536461 LAMA5O15230 3695 aa8.32□□□□□ -1.08
KDM4B-203ENST00000536461 MUC3AQ02505 3323 aa8.27□□□□□ -1.09
KDM4B-203ENST00000536461 PRO2289Q9P1D8 64 aa8.15□□□□□ -1.1
KDM4B-203ENST00000536461 ASPMQ8IZT6 3477 aa8.14□□□□□ -1.11
KDM4B-203ENST00000536461 FBN3Q75N90 2809 aa8.08□□□□□ -1.12
KDM4B-203ENST00000536461 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
KDM4B-203ENST00000536461 CSMD1Q96PZ7 3565 aa8.02□□□□□ -1.13
KDM4B-203ENST00000536461 DMDP11532 3685 aa8.01□□□□□ -1.13
KDM4B-203ENST00000536461 ANK3Q12955 4377 aaKnown RBP8.01□□□□□ -1.13
KDM4B-203ENST00000536461 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
KDM4B-203ENST00000536461 SMG1Q96Q15 3661 aaKnown RBP8□□□□□ -1.13
KDM4B-203ENST00000536461 KRTAP3-1Q9BYR8 98 aa7.94□□□□□ -1.14
KDM4B-203ENST00000536461 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
KDM4B-203ENST00000536461 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
KDM4B-203ENST00000536461 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
KDM4B-203ENST00000536461 COL7A1Q02388 2944 aa7.87□□□□□ -1.15
KDM4B-203ENST00000536461 MEGF8Q7Z7M0 2845 aa7.85□□□□□ -1.15
KDM4B-203ENST00000536461 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
KDM4B-203ENST00000536461 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
KDM4B-203ENST00000536461 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
KDM4B-203ENST00000536461 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
KDM4B-203ENST00000536461 SVEP1Q4LDE5 3571 aa7.66□□□□□ -1.18
KDM4B-203ENST00000536461 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.19
KDM4B-203ENST00000536461 CUBNO60494 3623 aa7.64□□□□□ -1.19
KDM4B-203ENST00000536461 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
KDM4B-203ENST00000536461 SPENQ96T58 3664 aaKnown RBP7.6□□□□□ -1.19
KDM4B-203ENST00000536461 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
KDM4B-203ENST00000536461 HUWE1Q7Z6Z7 4374 aaKnown RBP7.46□□□□□ -1.22
KDM4B-203ENST00000536461 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
KDM4B-203ENST00000536461 BSNQ9UPA5 3926 aa7.42□□□□□ -1.22
KDM4B-203ENST00000536461 ALMS1Q8TCU4 4167 aa7.31□□□□□ -1.24
KDM4B-203ENST00000536461 DNHD1Q96M86 4753 aa7.3□□□□□ -1.24
KDM4B-203ENST00000536461 DNAH9Q9NYC9 4486 aa7.2□□□□□ -1.26
KDM4B-203ENST00000536461 INE1O15225 51 aa7.2□□□□□ -1.26
KDM4B-203ENST00000536461 DNAH5Q8TE73 4624 aa7.16□□□□□ -1.26
KDM4B-203ENST00000536461 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
KDM4B-203ENST00000536461 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
KDM4B-203ENST00000536461 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms