RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 SETD2Q9BYW2 2564 aaPredicted RBP1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 DMBT1Q9UGM3 2413 aaPredicted RBP1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 PRRC2CQ9Y520 2896 aaKnown RBP1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 VWFP04275 2813 aa1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 TNRC18O15417 2968 aaPredicted RBP1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 CEP290O15078 2479 aa1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 PCNTO95613 3336 aa1.22□□□□□ -2.21
SPARCL1-208ENST00000535835 MEGF8Q7Z7M0 2845 aa1.21□□□□□ -2.22
SPARCL1-208ENST00000535835 NBASA2RRP1 2371 aa1.21□□□□□ -2.22
SPARCL1-208ENST00000535835 SRRM2Q9UQ35 2752 aaKnown RBP1.21□□□□□ -2.22
SPARCL1-208ENST00000535835 ABCA12Q86UK0 2595 aa1.21□□□□□ -2.22
SPARCL1-208ENST00000535835 DNAH11Q96DT5 4516 aa1.2□□□□□ -2.22
SPARCL1-208ENST00000535835 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
SPARCL1-208ENST00000535835 HIVEP3Q5T1R4 2406 aa1.2□□□□□ -2.22
SPARCL1-208ENST00000535835 NCOR2Q9Y618 2525 aa1.2□□□□□ -2.22
SPARCL1-208ENST00000535835 ITPR1Q14643 2758 aa1.19□□□□□ -2.22
SPARCL1-208ENST00000535835 MAP1AP78559 2803 aaPredicted RBP1.19□□□□□ -2.22
SPARCL1-208ENST00000535835 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
SPARCL1-208ENST00000535835 COL6A3P12111 3177 aa1.19□□□□□ -2.22
SPARCL1-208ENST00000535835 CRYBG3Q68DQ2 2970 aa1.19□□□□□ -2.22
SPARCL1-208ENST00000535835 EPG5Q9HCE0 2579 aa1.18□□□□□ -2.22
SPARCL1-208ENST00000535835 DEFB135Q30KP9 77 aa1.17□□□□□ -2.22
SPARCL1-208ENST00000535835 NBEAQ8NFP9 2946 aa1.17□□□□□ -2.22
SPARCL1-208ENST00000535835 COL6A5A8TX70 2615 aa1.17□□□□□ -2.22
SPARCL1-208ENST00000535835 KRTAP21-3Q3LHN1 58 aa1.16□□□□□ -2.22
SPARCL1-208ENST00000535835 ACANP16112 2415 aa1.16□□□□□ -2.22
SPARCL1-208ENST00000535835 CCDC168Q8NDH2 2452 aa1.15□□□□□ -2.22
SPARCL1-208ENST00000535835 SONP18583 2426 aaKnown RBP1.15□□□□□ -2.23
SPARCL1-208ENST00000535835 LRRK2Q5S007 2527 aa1.15□□□□□ -2.23
SPARCL1-208ENST00000535835 NF1P21359 2839 aa1.15□□□□□ -2.23
SPARCL1-208ENST00000535835 ZZEF1O43149 2961 aa1.15□□□□□ -2.23
SPARCL1-208ENST00000535835 AKAP13Q12802 2813 aa1.15□□□□□ -2.23
SPARCL1-208ENST00000535835 BDP1A6H8Y1 2624 aa1.15□□□□□ -2.23
SPARCL1-208ENST00000535835 CHD9Q3L8U1 2897 aa1.14□□□□□ -2.23
SPARCL1-208ENST00000535835 RP1L1Q8IWN7 2480 aaPredicted RBP1.14□□□□□ -2.23
SPARCL1-208ENST00000535835 FRYLO94915 3013 aa1.14□□□□□ -2.23
SPARCL1-208ENST00000535835 HELZ2Q9BYK8 2649 aaKnown RBP1.14□□□□□ -2.23
SPARCL1-208ENST00000535835 PRUNE2Q8WUY3 3088 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 USP24Q9UPU5 2620 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 DNAH8Q96JB1 4490 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 J3QKU1 62 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 KRTAP2-3P0C7H8 128 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 SMR3AQ99954 134 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 KRTAP2-4Q9BYR9 128 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 VCANP13611 3396 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 PTPN13Q12923 2485 aa1.13□□□□□ -2.23
SPARCL1-208ENST00000535835 SZT2Q5T011 3432 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 NIPBLQ6KC79 2804 aaeCLIP1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 MKI67P46013 3256 aaKnown RBP1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 CELSR1Q9NYQ6 3014 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 HTN3P15516 51 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 SPG11Q96JI7 2443 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 TRIOO75962 3097 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 CENPFP49454 3210 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 RANBP2P49792 3224 aaKnown RBP1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 TTC28Q96AY4 2481 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 LRBAP50851 2863 aa1.12□□□□□ -2.23
SPARCL1-208ENST00000535835 DNAH10Q8IVF4 4471 aa1.11□□□□□ -2.23
SPARCL1-208ENST00000535835 SPTBN5Q9NRC6 3674 aaKnown RBP1.11□□□□□ -2.23
SPARCL1-208ENST00000535835 BRCA2P51587 3418 aa1.11□□□□□ -2.23
SPARCL1-208ENST00000535835 VPS13AQ96RL7 3174 aa1.11□□□□□ -2.23
SPARCL1-208ENST00000535835 KRTAP8-1Q8IUC2 63 aa1.11□□□□□ -2.23
SPARCL1-208ENST00000535835 USP9YO00507 2555 aaPredicted RBP1.11□□□□□ -2.23
SPARCL1-208ENST00000535835 HTTP42858 3142 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 LAMA3Q16787 3333 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 M0R2T5 61 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 ZNF292O60281 2723 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 SACSQ9NZJ4 4579 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 UNC80Q8N2C7 3258 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 MUC3AQ02505 3323 aa1.1□□□□□ -2.23
SPARCL1-208ENST00000535835 ITPR3Q14573 2671 aa1.09□□□□□ -2.23
SPARCL1-208ENST00000535835 CFAP54Q96N23 3096 aa1.09□□□□□ -2.23
SPARCL1-208ENST00000535835 TENM4Q6N022 2769 aa1.09□□□□□ -2.24
SPARCL1-208ENST00000535835 CACNA1AO00555 2505 aa1.09□□□□□ -2.24
SPARCL1-208ENST00000535835 AKAP9Q99996 3911 aa1.08□□□□□ -2.24
SPARCL1-208ENST00000535835 ZFHX4Q86UP3 3567 aa1.08□□□□□ -2.24
SPARCL1-208ENST00000535835 DYNC2H1Q8NCM8 4307 aaKnown RBP1.08□□□□□ -2.24
SPARCL1-208ENST00000535835 CFAP47Q6ZTR5 3102 aa1.08□□□□□ -2.24
SPARCL1-208ENST00000535835 CHD8Q9HCK8 2581 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 CELSR3Q9NYQ7 3312 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 ATRQ13535 2644 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 UNC79Q9P2D8 2635 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 UTP20O75691 2785 aaKnown RBP1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 DEFB4AO15263 64 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 APCP25054 2843 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 DNAH2Q9P225 4427 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 CFAP46Q8IYW2 2715 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 BOD1L1Q8NFC6 3051 aa1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 TLN1Q9Y490 2541 aaKnown RBP1.07□□□□□ -2.24
SPARCL1-208ENST00000535835 LAMA2P24043 3122 aaKnown RBP1.06□□□□□ -2.24
SPARCL1-208ENST00000535835 POLQO75417 2590 aa1.06□□□□□ -2.24
SPARCL1-208ENST00000535835 DNAH1Q9P2D7 4330 aa1.06□□□□□ -2.24
SPARCL1-208ENST00000535835 NBPF19A0A087WUL8 3843 aa1.06□□□□□ -2.24
SPARCL1-208ENST00000535835 APOBP04114 4563 aaKnown RBP1.06□□□□□ -2.24
SPARCL1-208ENST00000535835 PIEZO1Q92508 2521 aa1.06□□□□□ -2.24
SPARCL1-208ENST00000535835 HUWE1Q7Z6Z7 4374 aaKnown RBP1.05□□□□□ -2.24
SPARCL1-208ENST00000535835 FRYQ5TBA9 3013 aa1.05□□□□□ -2.24
SPARCL1-208ENST00000535835 EYSQ5T1H1 3165 aa1.05□□□□□ -2.24
SPARCL1-208ENST00000535835 WDFY4Q6ZS81 3184 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms