RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 VCANP13611 3396 aa5.26□□□□□ -1.57
TNC-210ENST00000535648 SPEGQ15772 3267 aa5.25□□□□□ -1.57
TNC-210ENST00000535648 FRYLO94915 3013 aa5.25□□□□□ -1.57
TNC-210ENST00000535648 ADGRG4Q8IZF6 3080 aa5.24□□□□□ -1.57
TNC-210ENST00000535648 A0A1B0GVY2 172 aa5.24□□□□□ -1.57
TNC-210ENST00000535648 CRYBG3Q68DQ2 2970 aa5.24□□□□□ -1.57
TNC-210ENST00000535648 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
TNC-210ENST00000535648 COL6A3P12111 3177 aa5.24□□□□□ -1.57
TNC-210ENST00000535648 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
TNC-210ENST00000535648 CFAP47Q6ZTR5 3102 aa5.17□□□□□ -1.58
TNC-210ENST00000535648 UTP20O75691 2785 aaKnown RBP5.17□□□□□ -1.58
TNC-210ENST00000535648 UBR5O95071 2799 aaPredicted RBP5.15□□□□□ -1.58
TNC-210ENST00000535648 PP632Q6XCG6 107 aa5.15□□□□□ -1.58
TNC-210ENST00000535648 USP34Q70CQ2 3546 aa5.15□□□□□ -1.58
TNC-210ENST00000535648 ASH1LQ9NR48 2969 aaKnown RBP5.15□□□□□ -1.59
TNC-210ENST00000535648 NSD1Q96L73 2696 aaPredicted RBP5.14□□□□□ -1.59
TNC-210ENST00000535648 IGSF10Q6WRI0 2623 aa5.13□□□□□ -1.59
TNC-210ENST00000535648 KRTAP21-3Q3LHN1 58 aa5.12□□□□□ -1.59
TNC-210ENST00000535648 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
TNC-210ENST00000535648 KRTAP10-8P60410 259 aa5.1□□□□□ -1.59
TNC-210ENST00000535648 DMXL1Q9Y485 3027 aa5.08□□□□□ -1.6
TNC-210ENST00000535648 MYO15AQ9UKN7 3530 aa5.08□□□□□ -1.6
TNC-210ENST00000535648 H0YAA0 97 aa5.08□□□□□ -1.6
TNC-210ENST00000535648 XP32Q5T750 250 aa5.07□□□□□ -1.6
TNC-210ENST00000535648 EYSQ5T1H1 3165 aa5.07□□□□□ -1.6
TNC-210ENST00000535648 HRNRQ86YZ3 2850 aaPredicted RBP5.07□□□□□ -1.6
TNC-210ENST00000535648 DMXL2Q8TDJ6 3036 aa5.06□□□□□ -1.6
TNC-210ENST00000535648 FLNCQ14315 2725 aa5.05□□□□□ -1.6
TNC-210ENST00000535648 NIPBLQ6KC79 2804 aaeCLIP5.04□□□□□ -1.6
TNC-210ENST00000535648 SPTBN5Q9NRC6 3674 aaKnown RBP5.04□□□□□ -1.6
TNC-210ENST00000535648 WDFY3Q8IZQ1 3526 aa5.03□□□□□ -1.6
TNC-210ENST00000535648 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
TNC-210ENST00000535648 ATMQ13315 3056 aa5.02□□□□□ -1.61
TNC-210ENST00000535648 COL12A1Q99715 3063 aa5.01□□□□□ -1.61
TNC-210ENST00000535648 TPRXLQ17RH7 258 aa5□□□□□ -1.61
TNC-210ENST00000535648 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
TNC-210ENST00000535648 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
TNC-210ENST00000535648 ZANQ9Y493 2812 aa4.99□□□□□ -1.61
TNC-210ENST00000535648 CELSR2Q9HCU4 2923 aa4.97□□□□□ -1.61
TNC-210ENST00000535648 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
TNC-210ENST00000535648 P0C880 135 aa4.97□□□□□ -1.61
TNC-210ENST00000535648 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
TNC-210ENST00000535648 ASPMQ8IZT6 3477 aa4.93□□□□□ -1.62
TNC-210ENST00000535648 FBN2P35556 2912 aa4.93□□□□□ -1.62
TNC-210ENST00000535648 NF1P21359 2839 aa4.91□□□□□ -1.62
TNC-210ENST00000535648 LOC400499M0QZD8 3231 aa4.89□□□□□ -1.63
TNC-210ENST00000535648 MXRA5Q9NR99 2828 aa4.87□□□□□ -1.63
TNC-210ENST00000535648 TGP01266 2768 aa4.87□□□□□ -1.63
TNC-210ENST00000535648 DCHS2Q6V1P9 2916 aa4.87□□□□□ -1.63
TNC-210ENST00000535648 NBPF19A0A087WUL8 3843 aa4.82□□□□□ -1.64
TNC-210ENST00000535648 LAMA5O15230 3695 aa4.78□□□□□ -1.64
TNC-210ENST00000535648 CELSR1Q9NYQ6 3014 aa4.77□□□□□ -1.65
TNC-210ENST00000535648 DCHS1Q96JQ0 3298 aa4.77□□□□□ -1.65
TNC-210ENST00000535648 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
TNC-210ENST00000535648 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
TNC-210ENST00000535648 TENM4Q6N022 2769 aa4.71□□□□□ -1.66
TNC-210ENST00000535648 PDZD2O15018 2839 aa4.71□□□□□ -1.66
TNC-210ENST00000535648 TENM1Q9UKZ4 2725 aa4.71□□□□□ -1.66
TNC-210ENST00000535648 CSMD1Q96PZ7 3565 aa4.7□□□□□ -1.66
TNC-210ENST00000535648 TENM3Q9P273 2699 aa4.69□□□□□ -1.66
TNC-210ENST00000535648 KRTAP13-4Q3LI77 160 aa4.69□□□□□ -1.66
TNC-210ENST00000535648 ZFHX4Q86UP3 3567 aa4.68□□□□□ -1.66
TNC-210ENST00000535648 DMDP11532 3685 aa4.66□□□□□ -1.66
TNC-210ENST00000535648 RELNP78509 3460 aa4.64□□□□□ -1.67
TNC-210ENST00000535648 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
TNC-210ENST00000535648 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
TNC-210ENST00000535648 SMG1Q96Q15 3661 aaKnown RBP4.61□□□□□ -1.67
TNC-210ENST00000535648 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
TNC-210ENST00000535648 SPENQ96T58 3664 aaKnown RBP4.57□□□□□ -1.68
TNC-210ENST00000535648 KRTAP3-1Q9BYR8 98 aa4.55□□□□□ -1.68
TNC-210ENST00000535648 VWFP04275 2813 aa4.55□□□□□ -1.68
TNC-210ENST00000535648 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
TNC-210ENST00000535648 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
TNC-210ENST00000535648 PKD1L1Q8TDX9 2849 aa4.53□□□□□ -1.68
TNC-210ENST00000535648 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
TNC-210ENST00000535648 MUC3AQ02505 3323 aa4.48□□□□□ -1.69
TNC-210ENST00000535648 INE1O15225 51 aa4.46□□□□□ -1.69
TNC-210ENST00000535648 CUBNO60494 3623 aa4.45□□□□□ -1.7
TNC-210ENST00000535648 SVEP1Q4LDE5 3571 aa4.43□□□□□ -1.7
TNC-210ENST00000535648 BSNQ9UPA5 3926 aa4.42□□□□□ -1.7
TNC-210ENST00000535648 MEGF8Q7Z7M0 2845 aa4.39□□□□□ -1.71
TNC-210ENST00000535648 FBN3Q75N90 2809 aa4.37□□□□□ -1.71
TNC-210ENST00000535648 KRTAP3-2Q9BYR7 98 aa4.35□□□□□ -1.71
TNC-210ENST00000535648 ALMS1Q8TCU4 4167 aa4.35□□□□□ -1.71
TNC-210ENST00000535648 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
TNC-210ENST00000535648 CSMD2Q7Z408 3487 aa4.31□□□□□ -1.72
TNC-210ENST00000535648 KRTAP3-3Q9BYR6 98 aa4.31□□□□□ -1.72
TNC-210ENST00000535648 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
TNC-210ENST00000535648 KRTAP10-12P60413 245 aa4.3□□□□□ -1.72
TNC-210ENST00000535648 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
TNC-210ENST00000535648 FBN1P35555 2871 aaKnown RBP4.27□□□□□ -1.73
TNC-210ENST00000535648 OTOGQ6ZRI0 2925 aa4.24□□□□□ -1.73
TNC-210ENST00000535648 TRRAPQ9Y4A5 3859 aa4.23□□□□□ -1.73
TNC-210ENST00000535648 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
TNC-210ENST00000535648 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
TNC-210ENST00000535648 AKAP9Q99996 3911 aa4.21□□□□□ -1.74
TNC-210ENST00000535648 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
TNC-210ENST00000535648 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
TNC-210ENST00000535648 KRTAP12-3P60328 96 aa4.15□□□□□ -1.74
TNC-210ENST00000535648 HUWE1Q7Z6Z7 4374 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms