RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 A0A1B0GVX0 72 aa12.93□□□□□ -0.34
RBFOX1-206ENST00000535565 DMBT1Q9UGM3 2413 aaPredicted RBP12.92□□□□□ -0.34
RBFOX1-206ENST00000535565 A0A087WVE0 104 aa12.91□□□□□ -0.34
RBFOX1-206ENST00000535565 RETNLBQ9BQ08 111 aa12.91□□□□□ -0.34
RBFOX1-206ENST00000535565 IGHV6-1A0A0B4J1U7 121 aa12.9□□□□□ -0.35
RBFOX1-206ENST00000535565 HCG22E2RYF7 251 aa12.83□□□□□ -0.36
RBFOX1-206ENST00000535565 C8orf87E5RJ46 101 aa12.82□□□□□ -0.36
RBFOX1-206ENST00000535565 FP248Q71RG6 208 aaPredicted RBP12.82□□□□□ -0.36
RBFOX1-206ENST00000535565 C8orf17Q9NRJ1 99 aa12.82□□□□□ -0.36
RBFOX1-206ENST00000535565 MMP24-AS1A0A0U1RRL7 71 aa12.8□□□□□ -0.36
RBFOX1-206ENST00000535565 FAM236AA0A1B0GUQ0 79 aa12.8□□□□□ -0.36
RBFOX1-206ENST00000535565 FAM236BA0A1B0GV22 79 aa12.8□□□□□ -0.36
RBFOX1-206ENST00000535565 LINC00313P59037 77 aa12.77□□□□□ -0.36
RBFOX1-206ENST00000535565 WFDC13Q8IUB5 93 aa12.77□□□□□ -0.36
RBFOX1-206ENST00000535565 CASC2Q6XLA1 102 aa12.77□□□□□ -0.37
RBFOX1-206ENST00000535565 hDV103S1A0JD37 113 aa12.75□□□□□ -0.37
RBFOX1-206ENST00000535565 NOTCH2NLQ7Z3S9 236 aa12.75□□□□□ -0.37
RBFOX1-206ENST00000535565 SCGB1A1P11684 91 aa12.74□□□□□ -0.37
RBFOX1-206ENST00000535565 IGLV7-46A0A075B6I9 117 aa12.71□□□□□ -0.37
RBFOX1-206ENST00000535565 PRR4Q16378 134 aa12.7□□□□□ -0.38
RBFOX1-206ENST00000535565 TMEM254Q8TBM7 123 aa12.69□□□□□ -0.38
RBFOX1-206ENST00000535565 PCLOQ9Y6V0 5065 aa12.68□□□□□ -0.38
RBFOX1-206ENST00000535565 MRPL34Q9BQ48 92 aaKnown RBP12.67□□□□□ -0.38
RBFOX1-206ENST00000535565 C9orf92A6NGG3 77 aa12.65□□□□□ -0.38
RBFOX1-206ENST00000535565 ATOX1O00244 68 aa12.65□□□□□ -0.38
RBFOX1-206ENST00000535565 KRTAP16-1A8MUX0 517 aa12.61□□□□□ -0.39
RBFOX1-206ENST00000535565 NDUFS5O43920 106 aa12.58□□□□□ -0.4
RBFOX1-206ENST00000535565 SMIM20Q8N5G0 67 aa12.58□□□□□ -0.4
RBFOX1-206ENST00000535565 KRTAP13-3Q3SY46 172 aa12.56□□□□□ -0.4
RBFOX1-206ENST00000535565 Q8N9P0 234 aaPredicted RBP12.55□□□□□ -0.4
RBFOX1-206ENST00000535565 TPRXLQ17RH7 258 aa12.53□□□□□ -0.4
RBFOX1-206ENST00000535565 OCR1Q9BZK8 76 aa12.52□□□□□ -0.4
RBFOX1-206ENST00000535565 TP53AIP1Q9HCN2 124 aa12.52□□□□□ -0.4
RBFOX1-206ENST00000535565 ANAPC13Q9BS18 74 aa12.52□□□□□ -0.41
RBFOX1-206ENST00000535565 TRAV7A0A075B6U4 112 aa12.5□□□□□ -0.41
RBFOX1-206ENST00000535565 C20orf166-AS1Q96NR2 134 aa12.47□□□□□ -0.41
RBFOX1-206ENST00000535565 UQCRQO14949 82 aa12.47□□□□□ -0.41
RBFOX1-206ENST00000535565 SERP2Q8N6R1 65 aa12.47□□□□□ -0.41
RBFOX1-206ENST00000535565 A8MUU9 505 aa12.45□□□□□ -0.42
RBFOX1-206ENST00000535565 XP32Q5T750 250 aa12.43□□□□□ -0.42
RBFOX1-206ENST00000535565 Q75L30 129 aa12.42□□□□□ -0.42
RBFOX1-206ENST00000535565 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
RBFOX1-206ENST00000535565 COX7CP15954 63 aa12.37□□□□□ -0.43
RBFOX1-206ENST00000535565 C5orf47Q569G3 176 aa12.37□□□□□ -0.43
RBFOX1-206ENST00000535565 RPL37P61927 97 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-206ENST00000535565 H0Y9P7 68 aa12.33□□□□□ -0.44
RBFOX1-206ENST00000535565 MP68P56378 58 aa12.33□□□□□ -0.44
RBFOX1-206ENST00000535565 ZCCHC13Q8WW36 166 aaKnown RBP12.33□□□□□ -0.44
RBFOX1-206ENST00000535565 Q5W150 140 aa12.31□□□□□ -0.44
RBFOX1-206ENST00000535565 ATP11AUNQ6ZP68 121 aa12.29□□□□□ -0.44
RBFOX1-206ENST00000535565 PCP4P48539 62 aa12.28□□□□□ -0.44
RBFOX1-206ENST00000535565 H3BPC8 53 aa12.25□□□□□ -0.45
RBFOX1-206ENST00000535565 C20orf197Q8N268 126 aa12.24□□□□□ -0.45
RBFOX1-206ENST00000535565 HERC1Q15751 4861 aa12.24□□□□□ -0.45
RBFOX1-206ENST00000535565 LINC00208Q96KT6 92 aa12.22□□□□□ -0.45
RBFOX1-206ENST00000535565 LPAP08519 4548 aa12.22□□□□□ -0.45
RBFOX1-206ENST00000535565 C1orf64Q8NEQ6 169 aa12.2□□□□□ -0.46
RBFOX1-206ENST00000535565 CCDC179H3BU77 68 aa12.19□□□□□ -0.46
RBFOX1-206ENST00000535565 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
RBFOX1-206ENST00000535565 LOC101927531A0A1B0GV80 90 aa12.18□□□□□ -0.46
RBFOX1-206ENST00000535565 SNURFQ9Y675 71 aa12.17□□□□□ -0.46
RBFOX1-206ENST00000535565 KLKP1Q107X0 134 aa12.15□□□□□ -0.46
RBFOX1-206ENST00000535565 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
RBFOX1-206ENST00000535565 PCOTHQ58A44 107 aa12.13□□□□□ -0.47
RBFOX1-206ENST00000535565 IGKV2-30P06310 120 aa12.12□□□□□ -0.47
RBFOX1-206ENST00000535565 IGKV2D-30A0A075B6S6 120 aa12.11□□□□□ -0.47
RBFOX1-206ENST00000535565 C7orf65Q6ZTY9 151 aa12.09□□□□□ -0.47
RBFOX1-206ENST00000535565 LRP2P98164 4655 aa12.08□□□□□ -0.48
RBFOX1-206ENST00000535565 HMCN2Q8NDA2 5059 aa12.08□□□□□ -0.48
RBFOX1-206ENST00000535565 CYP4F30PQ9H0H9 118 aa12.07□□□□□ -0.48
RBFOX1-206ENST00000535565 NDUFC1O43677 76 aa12.03□□□□□ -0.48
RBFOX1-206ENST00000535565 SPINK7P58062 85 aa12.03□□□□□ -0.48
RBFOX1-206ENST00000535565 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
RBFOX1-206ENST00000535565 H7BZZ5 65 aa11.93□□□□□ -0.5
RBFOX1-206ENST00000535565 HRES1P13985 223 aa11.87□□□□□ -0.51
RBFOX1-206ENST00000535565 MUC17Q685J3 4493 aa11.85□□□□□ -0.51
RBFOX1-206ENST00000535565 SPANXA2-OT1Q8N9U9 137 aa11.83□□□□□ -0.52
RBFOX1-206ENST00000535565 TMEM258P61165 79 aa11.81□□□□□ -0.52
RBFOX1-206ENST00000535565 C4orf26Q17RF5 130 aa11.79□□□□□ -0.52
RBFOX1-206ENST00000535565 KRTAP4-1Q9BYQ7 146 aa11.76□□□□□ -0.53
RBFOX1-206ENST00000535565 FAM236DA0A1B0GTK5 79 aa11.73□□□□□ -0.53
RBFOX1-206ENST00000535565 FAM236CP0DP71 79 aa11.73□□□□□ -0.53
RBFOX1-206ENST00000535565 ATP5EP56381 51 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-206ENST00000535565 RBM12B-AS1Q9P1G2 102 aa11.71□□□□□ -0.54
RBFOX1-206ENST00000535565 COX6B2Q6YFQ2 88 aa11.69□□□□□ -0.54
RBFOX1-206ENST00000535565 MPLKIPQ8TAP9 179 aa11.67□□□□□ -0.54
RBFOX1-206ENST00000535565 DMAC1Q96GE9 116 aa11.66□□□□□ -0.54
RBFOX1-206ENST00000535565 A8MUN3 132 aa11.65□□□□□ -0.54
RBFOX1-206ENST00000535565 ACYP2P14621 99 aa11.59□□□□□ -0.55
RBFOX1-206ENST00000535565 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
RBFOX1-206ENST00000535565 KRTAP3-1Q9BYR8 98 aa11.58□□□□□ -0.56
RBFOX1-206ENST00000535565 MUC2Q02817 5179 aa11.49□□□□□ -0.57
RBFOX1-206ENST00000535565 H1FX-AS1Q4G0G2 97 aa11.49□□□□□ -0.57
RBFOX1-206ENST00000535565 COA5Q86WW8 74 aa11.45□□□□□ -0.58
RBFOX1-206ENST00000535565 RNF213Q63HN8 5207 aa11.44□□□□□ -0.58
RBFOX1-206ENST00000535565 SERP1Q9Y6X1 66 aa11.43□□□□□ -0.58
RBFOX1-206ENST00000535565 CHKB-CPT1BH3BT56 60 aa11.41□□□□□ -0.58
RBFOX1-206ENST00000535565 KRTAP19-2Q3LHN2 52 aa11.41□□□□□ -0.58
RBFOX1-206ENST00000535565 S4R3F8 94 aa11.37□□□□□ -0.59
RBFOX1-206ENST00000535565 LCA10Q71F78 164 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms