RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 HSPB8Q9UJY1 196 aa4.3□□□□□ -1.72
CSDE1-215ENST00000533818 IGKV3D-7A0A0C4DH55 119 aa4.29□□□□□ -1.72
CSDE1-215ENST00000533818 A0A1B0GVX0 72 aa4.29□□□□□ -1.72
CSDE1-215ENST00000533818 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
CSDE1-215ENST00000533818 RBM3P98179 157 aaKnown RBP4.28□□□□□ -1.72
CSDE1-215ENST00000533818 CSAG1Q6PB30 78 aa4.28□□□□□ -1.72
CSDE1-215ENST00000533818 LCA10Q71F78 164 aa4.28□□□□□ -1.72
CSDE1-215ENST00000533818 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
CSDE1-215ENST00000533818 COPS9Q8WXC6 57 aa4.27□□□□□ -1.73
CSDE1-215ENST00000533818 NDUFV3P56181 108 aaKnown RBP4.26□□□□□ -1.73
CSDE1-215ENST00000533818 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
CSDE1-215ENST00000533818 HSBP1O75506 76 aa4.25□□□□□ -1.73
CSDE1-215ENST00000533818 LEPROTL1O95214 131 aa4.24□□□□□ -1.73
CSDE1-215ENST00000533818 IFITM1P13164 125 aa4.24□□□□□ -1.73
CSDE1-215ENST00000533818 C12orf57Q99622 126 aa4.24□□□□□ -1.73
CSDE1-215ENST00000533818 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
CSDE1-215ENST00000533818 H3BMG7 143 aa4.23□□□□□ -1.73
CSDE1-215ENST00000533818 MUSTN1Q8IVN3 82 aa4.22□□□□□ -1.73
CSDE1-215ENST00000533818 TTTY13Q9BZ97 58 aa4.22□□□□□ -1.73
CSDE1-215ENST00000533818 TRBV7-4A0A0J9YYF1 115 aa4.2□□□□□ -1.74
CSDE1-215ENST00000533818 TRGC2P03986 189 aa4.2□□□□□ -1.74
CSDE1-215ENST00000533818 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
CSDE1-215ENST00000533818 S4R3F8 94 aa4.19□□□□□ -1.74
CSDE1-215ENST00000533818 FABP4P15090 132 aa4.18□□□□□ -1.74
CSDE1-215ENST00000533818 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-215ENST00000533818 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
CSDE1-215ENST00000533818 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
CSDE1-215ENST00000533818 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
CSDE1-215ENST00000533818 IGKV2D-30A0A075B6S6 120 aa4.16□□□□□ -1.74
CSDE1-215ENST00000533818 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
CSDE1-215ENST00000533818 BVES-AS1Q5T3Y7 98 aa4.14□□□□□ -1.75
CSDE1-215ENST00000533818 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CSDE1-215ENST00000533818 ANKRD29Q8N6D5 301 aa4.13□□□□□ -1.75
CSDE1-215ENST00000533818 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
CSDE1-215ENST00000533818 FABP2P12104 132 aa4.12□□□□□ -1.75
CSDE1-215ENST00000533818 C2orf91Q6ZV80 131 aa4.12□□□□□ -1.75
CSDE1-215ENST00000533818 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
CSDE1-215ENST00000533818 TMEM218A2RU14 115 aa4.1□□□□□ -1.75
CSDE1-215ENST00000533818 NDUFB1O75438 58 aa4.1□□□□□ -1.75
CSDE1-215ENST00000533818 SNCGO76070 127 aa4.1□□□□□ -1.75
CSDE1-215ENST00000533818 TRACP01848 142 aa4.1□□□□□ -1.75
CSDE1-215ENST00000533818 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
CSDE1-215ENST00000533818 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
CSDE1-215ENST00000533818 J3KT08 172 aa4.09□□□□□ -1.75
CSDE1-215ENST00000533818 Q6ZVQ6 151 aa4.09□□□□□ -1.75
CSDE1-215ENST00000533818 PDE6GP18545 87 aa4.08□□□□□ -1.76
CSDE1-215ENST00000533818 hCG_2014768A0A024R1R8 64 aa4.07□□□□□ -1.76
CSDE1-215ENST00000533818 CCKP06307 115 aa4.07□□□□□ -1.76
CSDE1-215ENST00000533818 A0A1B0GV72 72 aa4.06□□□□□ -1.76
CSDE1-215ENST00000533818 A8MUN3 132 aa4.06□□□□□ -1.76
CSDE1-215ENST00000533818 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
CSDE1-215ENST00000533818 UQCC3Q6UW78 93 aa4.05□□□□□ -1.76
CSDE1-215ENST00000533818 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
CSDE1-215ENST00000533818 CYSTM1Q9H1C7 97 aa4.05□□□□□ -1.76
CSDE1-215ENST00000533818 SYS1-DBNDD2H3BUS1 97 aa4.03□□□□□ -1.76
CSDE1-215ENST00000533818 K7EQZ3 153 aa4.01□□□□□ -1.77
CSDE1-215ENST00000533818 NDUFS5O43920 106 aa4□□□□□ -1.77
CSDE1-215ENST00000533818 LINC01545Q5VT33 79 aa4□□□□□ -1.77
CSDE1-215ENST00000533818 H0YGX0 51 aa3.99□□□□□ -1.77
CSDE1-215ENST00000533818 Q5W150 140 aa3.99□□□□□ -1.77
CSDE1-215ENST00000533818 MRPL34Q9BQ48 92 aaKnown RBP3.99□□□□□ -1.77
CSDE1-215ENST00000533818 VPS25Q9BRG1 176 aa3.99□□□□□ -1.77
CSDE1-215ENST00000533818 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
CSDE1-215ENST00000533818 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
CSDE1-215ENST00000533818 H0YAA0 97 aa3.96□□□□□ -1.78
CSDE1-215ENST00000533818 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
CSDE1-215ENST00000533818 PET117Q6UWS5 81 aa3.94□□□□□ -1.78
CSDE1-215ENST00000533818 A0A1B0GX51 115 aa3.92□□□□□ -1.78
CSDE1-215ENST00000533818 MT1EP04732 61 aa3.92□□□□□ -1.78
CSDE1-215ENST00000533818 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
CSDE1-215ENST00000533818 CLLU1Q5K131 121 aa3.91□□□□□ -1.78
CSDE1-215ENST00000533818 YPEL4Q96NS1 127 aa3.91□□□□□ -1.78
CSDE1-215ENST00000533818 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
CSDE1-215ENST00000533818 KRTAP20-2Q3LI61 65 aa3.9□□□□□ -1.79
CSDE1-215ENST00000533818 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
CSDE1-215ENST00000533818 Q6ZQT0 140 aa3.89□□□□□ -1.79
CSDE1-215ENST00000533818 hDV103S1A0JD37 113 aa3.88□□□□□ -1.79
CSDE1-215ENST00000533818 MT1GP13640 62 aa3.88□□□□□ -1.79
CSDE1-215ENST00000533818 KRTAP15-1Q3LI76 137 aa3.87□□□□□ -1.79
CSDE1-215ENST00000533818 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
CSDE1-215ENST00000533818 H3BQ85 93 aa3.86□□□□□ -1.79
CSDE1-215ENST00000533818 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
CSDE1-215ENST00000533818 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
CSDE1-215ENST00000533818 TMEM256-PLSCR3K7ERE1 68 aa3.85□□□□□ -1.79
CSDE1-215ENST00000533818 ATOH7Q8N100 152 aa3.84□□□□□ -1.79
CSDE1-215ENST00000533818 TRIAP1O43715 76 aa3.83□□□□□ -1.8
CSDE1-215ENST00000533818 DNAL4O96015 105 aa3.83□□□□□ -1.8
CSDE1-215ENST00000533818 A0A087WVE0 104 aa3.82□□□□□ -1.8
CSDE1-215ENST00000533818 APOC3P02656 99 aa3.82□□□□□ -1.8
CSDE1-215ENST00000533818 R4GN34 69 aa3.82□□□□□ -1.8
CSDE1-215ENST00000533818 SNAPINO95295 136 aa3.81□□□□□ -1.8
CSDE1-215ENST00000533818 KRTDAPP60985 99 aa3.8□□□□□ -1.8
CSDE1-215ENST00000533818 MT1MQ8N339 61 aa3.8□□□□□ -1.8
CSDE1-215ENST00000533818 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
CSDE1-215ENST00000533818 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
CSDE1-215ENST00000533818 LINC01554Q52M75 96 aa3.78□□□□□ -1.8
CSDE1-215ENST00000533818 SVBPQ8N300 66 aa3.77□□□□□ -1.81
CSDE1-215ENST00000533818 C9JAW5 83 aa3.76□□□□□ -1.81
CSDE1-215ENST00000533818 HCG22E2RYF7 251 aa3.76□□□□□ -1.81
CSDE1-215ENST00000533818 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms