RNA–Protein interactions for RNA: ENST00000533170.1

AP003555.2-202, humanhuman

TSL 3

Gene AP003555.2, Length 369 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.2-202ENST00000533170 LRRK2Q5S007 2527 aa2.07□□□□□ -2.08
AP003555.2-202ENST00000533170 PTPN13Q12923 2485 aa2.06□□□□□ -2.08
AP003555.2-202ENST00000533170 SRCAPQ6ZRS2 3230 aa2.06□□□□□ -2.08
AP003555.2-202ENST00000533170 POLQO75417 2590 aa2.04□□□□□ -2.08
AP003555.2-202ENST00000533170 HIVEP3Q5T1R4 2406 aa2.04□□□□□ -2.08
AP003555.2-202ENST00000533170 RIF1Q5UIP0 2472 aaKnown RBP2.04□□□□□ -2.08
AP003555.2-202ENST00000533170 CRYBG3Q68DQ2 2970 aa2.04□□□□□ -2.08
AP003555.2-202ENST00000533170 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
AP003555.2-202ENST00000533170 SONP18583 2426 aaKnown RBP2.03□□□□□ -2.08
AP003555.2-202ENST00000533170 SPG11Q96JI7 2443 aa2.03□□□□□ -2.08
AP003555.2-202ENST00000533170 USP24Q9UPU5 2620 aa2.02□□□□□ -2.09
AP003555.2-202ENST00000533170 EPG5Q9HCE0 2579 aa2.02□□□□□ -2.09
AP003555.2-202ENST00000533170 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
AP003555.2-202ENST00000533170 MAP1AP78559 2803 aaPredicted RBP2.01□□□□□ -2.09
AP003555.2-202ENST00000533170 AKAP13Q12802 2813 aa2.01□□□□□ -2.09
AP003555.2-202ENST00000533170 BDP1A6H8Y1 2624 aa2.01□□□□□ -2.09
AP003555.2-202ENST00000533170 ITPR1Q14643 2758 aa2□□□□□ -2.09
AP003555.2-202ENST00000533170 CEP350Q5VT06 3117 aa2□□□□□ -2.09
AP003555.2-202ENST00000533170 U3KQA8 63 aa1.99□□□□□ -2.09
AP003555.2-202ENST00000533170 CACNA1AO00555 2505 aa1.98□□□□□ -2.09
AP003555.2-202ENST00000533170 ATRQ13535 2644 aa1.97□□□□□ -2.09
AP003555.2-202ENST00000533170 COL6A3P12111 3177 aa1.97□□□□□ -2.09
AP003555.2-202ENST00000533170 USP9YO00507 2555 aaPredicted RBP1.97□□□□□ -2.09
AP003555.2-202ENST00000533170 PIEZO1Q92508 2521 aa1.97□□□□□ -2.09
AP003555.2-202ENST00000533170 CELSR1Q9NYQ6 3014 aa1.97□□□□□ -2.09
AP003555.2-202ENST00000533170 ACANP16112 2415 aa1.96□□□□□ -2.1
AP003555.2-202ENST00000533170 HELZ2Q9BYK8 2649 aaKnown RBP1.95□□□□□ -2.1
AP003555.2-202ENST00000533170 NOTCH2Q04721 2471 aa1.95□□□□□ -2.1
AP003555.2-202ENST00000533170 DEFB4AO15263 64 aa1.93□□□□□ -2.1
AP003555.2-202ENST00000533170 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
AP003555.2-202ENST00000533170 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
AP003555.2-202ENST00000533170 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
AP003555.2-202ENST00000533170 FRYLO94915 3013 aa1.92□□□□□ -2.1
AP003555.2-202ENST00000533170 CHD8Q9HCK8 2581 aa1.92□□□□□ -2.1
AP003555.2-202ENST00000533170 ITPR3Q14573 2671 aa1.92□□□□□ -2.1
AP003555.2-202ENST00000533170 MTORP42345 2549 aa1.92□□□□□ -2.1
AP003555.2-202ENST00000533170 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
AP003555.2-202ENST00000533170 EP400Q96L91 3159 aa1.9□□□□□ -2.1
AP003555.2-202ENST00000533170 KRTAP10-4P60372 401 aaPredicted RBP1.9□□□□□ -2.11
AP003555.2-202ENST00000533170 CHD9Q3L8U1 2897 aa1.9□□□□□ -2.11
AP003555.2-202ENST00000533170 NBEAQ8NFP9 2946 aa1.89□□□□□ -2.11
AP003555.2-202ENST00000533170 PRUNE2Q8WUY3 3088 aa1.89□□□□□ -2.11
AP003555.2-202ENST00000533170 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
AP003555.2-202ENST00000533170 CFAP46Q8IYW2 2715 aa1.88□□□□□ -2.11
AP003555.2-202ENST00000533170 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
AP003555.2-202ENST00000533170 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
AP003555.2-202ENST00000533170 SETXQ7Z333 2677 aaKnown RBP1.88□□□□□ -2.11
AP003555.2-202ENST00000533170 CENPEQ02224 2701 aa1.88□□□□□ -2.11
AP003555.2-202ENST00000533170 FLNCQ14315 2725 aa1.87□□□□□ -2.11
AP003555.2-202ENST00000533170 UTP20O75691 2785 aaKnown RBP1.86□□□□□ -2.11
AP003555.2-202ENST00000533170 UTRNP46939 3433 aa1.85□□□□□ -2.11
AP003555.2-202ENST00000533170 SMR3AQ99954 134 aa1.85□□□□□ -2.11
AP003555.2-202ENST00000533170 ZZEF1O43149 2961 aa1.84□□□□□ -2.12
AP003555.2-202ENST00000533170 NIPBLQ6KC79 2804 aaeCLIP1.83□□□□□ -2.12
AP003555.2-202ENST00000533170 LRBAP50851 2863 aa1.83□□□□□ -2.12
AP003555.2-202ENST00000533170 RANBP2P49792 3224 aaKnown RBP1.83□□□□□ -2.12
AP003555.2-202ENST00000533170 TLN1Q9Y490 2541 aaKnown RBP1.83□□□□□ -2.12
AP003555.2-202ENST00000533170 GCN1Q92616 2671 aaKnown RBP1.83□□□□□ -2.12
AP003555.2-202ENST00000533170 FRYQ5TBA9 3013 aa1.83□□□□□ -2.12
AP003555.2-202ENST00000533170 APCP25054 2843 aa1.82□□□□□ -2.12
AP003555.2-202ENST00000533170 TGP01266 2768 aa1.82□□□□□ -2.12
AP003555.2-202ENST00000533170 NF1P21359 2839 aa1.82□□□□□ -2.12
AP003555.2-202ENST00000533170 VPS13DQ5THJ4 4388 aa1.82□□□□□ -2.12
AP003555.2-202ENST00000533170 COL7A1Q02388 2944 aa1.81□□□□□ -2.12
AP003555.2-202ENST00000533170 DOPEY1Q5JWR5 2465 aa1.81□□□□□ -2.12
AP003555.2-202ENST00000533170 CFAP54Q96N23 3096 aa1.8□□□□□ -2.12
AP003555.2-202ENST00000533170 TRIOO75962 3097 aa1.8□□□□□ -2.12
AP003555.2-202ENST00000533170 GOLGB1Q14789 3259 aaKnown RBP1.8□□□□□ -2.12
AP003555.2-202ENST00000533170 ZFHX4Q86UP3 3567 aa1.79□□□□□ -2.12
AP003555.2-202ENST00000533170 PCNTO95613 3336 aa1.78□□□□□ -2.12
AP003555.2-202ENST00000533170 HTTP42858 3142 aa1.78□□□□□ -2.12
AP003555.2-202ENST00000533170 USP9XQ93008 2570 aaPredicted RBP1.77□□□□□ -2.13
AP003555.2-202ENST00000533170 VPS13AQ96RL7 3174 aa1.77□□□□□ -2.13
AP003555.2-202ENST00000533170 BOD1L1Q8NFC6 3051 aa1.76□□□□□ -2.13
AP003555.2-202ENST00000533170 SPTAN1Q13813 2472 aaKnown RBP1.76□□□□□ -2.13
AP003555.2-202ENST00000533170 MYO18BQ8IUG5 2567 aa1.76□□□□□ -2.13
AP003555.2-202ENST00000533170 COL12A1Q99715 3063 aa1.75□□□□□ -2.13
AP003555.2-202ENST00000533170 DCHS2Q6V1P9 2916 aa1.75□□□□□ -2.13
AP003555.2-202ENST00000533170 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
AP003555.2-202ENST00000533170 NSD1Q96L73 2696 aaPredicted RBP1.74□□□□□ -2.13
AP003555.2-202ENST00000533170 ACACBO00763 2458 aa1.73□□□□□ -2.13
AP003555.2-202ENST00000533170 NOTCH1P46531 2555 aa1.72□□□□□ -2.13
AP003555.2-202ENST00000533170 C5orf42Q9H799 3197 aa1.72□□□□□ -2.13
AP003555.2-202ENST00000533170 DNAH12Q6ZR08 3092 aa1.72□□□□□ -2.13
AP003555.2-202ENST00000533170 DMXL1Q9Y485 3027 aa1.72□□□□□ -2.13
AP003555.2-202ENST00000533170 PDZD2O15018 2839 aa1.72□□□□□ -2.13
AP003555.2-202ENST00000533170 STAB1Q9NY15 2570 aa1.71□□□□□ -2.14
AP003555.2-202ENST00000533170 ZFYVE26Q68DK2 2539 aa1.71□□□□□ -2.14
AP003555.2-202ENST00000533170 ATMQ13315 3056 aa1.71□□□□□ -2.14
AP003555.2-202ENST00000533170 TLN2Q9Y4G6 2542 aa1.7□□□□□ -2.14
AP003555.2-202ENST00000533170 DNAH11Q96DT5 4516 aa1.7□□□□□ -2.14
AP003555.2-202ENST00000533170 SZT2Q5T011 3432 aa1.7□□□□□ -2.14
AP003555.2-202ENST00000533170 ITPR2Q14571 2701 aa1.69□□□□□ -2.14
AP003555.2-202ENST00000533170 AKAP9Q99996 3911 aa1.69□□□□□ -2.14
AP003555.2-202ENST00000533170 CSMD3Q7Z407 3707 aa1.69□□□□□ -2.14
AP003555.2-202ENST00000533170 ANKRD11Q6UB99 2663 aaPredicted RBP1.68□□□□□ -2.14
AP003555.2-202ENST00000533170 TEX15Q9BXT5 2789 aa1.68□□□□□ -2.14
AP003555.2-202ENST00000533170 UNC79Q9P2D8 2635 aa1.68□□□□□ -2.14
AP003555.2-202ENST00000533170 DMXL2Q8TDJ6 3036 aa1.67□□□□□ -2.14
AP003555.2-202ENST00000533170 MKI67P46013 3256 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms