RNA–Protein interactions for RNA: ENST00000533170.1

AP003555.2-202, humanhuman

TSL 3

Gene AP003555.2, Length 369 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.2-202ENST00000533170 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
AP003555.2-202ENST00000533170 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
AP003555.2-202ENST00000533170 PHF23Q9BUL5 403 aaPredicted RBP15.61■□□□□ 0.09
AP003555.2-202ENST00000533170 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
AP003555.2-202ENST00000533170 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
AP003555.2-202ENST00000533170 FOXD1Q16676 465 aa14.15□□□□□ -0.14
AP003555.2-202ENST00000533170 PPP6R1Q9UPN7 881 aa13.74□□□□□ -0.21
AP003555.2-202ENST00000533170 ADRA2BP18089 450 aa13.69□□□□□ -0.22
AP003555.2-202ENST00000533170 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
AP003555.2-202ENST00000533170 MSH5O43196 834 aa12.94□□□□□ -0.34
AP003555.2-202ENST00000533170 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
AP003555.2-202ENST00000533170 KCNA4P22459 653 aa12.55□□□□□ -0.4
AP003555.2-202ENST00000533170 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
AP003555.2-202ENST00000533170 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
AP003555.2-202ENST00000533170 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
AP003555.2-202ENST00000533170 CNKSR2Q8WXI2 1034 aa12.29□□□□□ -0.44
AP003555.2-202ENST00000533170 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
AP003555.2-202ENST00000533170 DMRT2Q9Y5R5 561 aa12.19□□□□□ -0.46
AP003555.2-202ENST00000533170 RNF216Q9NWF9 866 aaPredicted RBP12.04□□□□□ -0.48
AP003555.2-202ENST00000533170 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
AP003555.2-202ENST00000533170 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
AP003555.2-202ENST00000533170 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
AP003555.2-202ENST00000533170 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
AP003555.2-202ENST00000533170 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
AP003555.2-202ENST00000533170 ZBTB22O15209 634 aa11.61□□□□□ -0.55
AP003555.2-202ENST00000533170 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
AP003555.2-202ENST00000533170 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
AP003555.2-202ENST00000533170 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
AP003555.2-202ENST00000533170 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
AP003555.2-202ENST00000533170 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
AP003555.2-202ENST00000533170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
AP003555.2-202ENST00000533170 MYCNP04198 464 aaPredicted RBP11.26□□□□□ -0.61
AP003555.2-202ENST00000533170 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
AP003555.2-202ENST00000533170 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
AP003555.2-202ENST00000533170 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
AP003555.2-202ENST00000533170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.05□□□□□ -0.64
AP003555.2-202ENST00000533170 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
AP003555.2-202ENST00000533170 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
AP003555.2-202ENST00000533170 ATF5Q9Y2D1 282 aaPredicted RBP11.03□□□□□ -0.64
AP003555.2-202ENST00000533170 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
AP003555.2-202ENST00000533170 SPINK5Q9NQ38 1064 aaPredicted RBP10.91□□□□□ -0.66
AP003555.2-202ENST00000533170 MYT1Q01538 1121 aa10.89□□□□□ -0.67
AP003555.2-202ENST00000533170 APLP2Q06481 763 aa10.87□□□□□ -0.67
AP003555.2-202ENST00000533170 TTBK1Q5TCY1 1321 aaPredicted RBP10.8□□□□□ -0.68
AP003555.2-202ENST00000533170 CAPN15O75808 1086 aa10.78□□□□□ -0.68
AP003555.2-202ENST00000533170 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
AP003555.2-202ENST00000533170 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
AP003555.2-202ENST00000533170 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
AP003555.2-202ENST00000533170 DSG3P32926 999 aa10.65□□□□□ -0.7
AP003555.2-202ENST00000533170 POLA2Q14181 598 aa10.64□□□□□ -0.71
AP003555.2-202ENST00000533170 ABCB7O75027 752 aa10.62□□□□□ -0.71
AP003555.2-202ENST00000533170 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
AP003555.2-202ENST00000533170 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
AP003555.2-202ENST00000533170 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
AP003555.2-202ENST00000533170 ZBTB12Q9Y330 459 aaPredicted RBP10.43□□□□□ -0.74
AP003555.2-202ENST00000533170 FBLN2P98095 1184 aa10.42□□□□□ -0.74
AP003555.2-202ENST00000533170 FKBP8Q14318 412 aa10.41□□□□□ -0.74
AP003555.2-202ENST00000533170 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
AP003555.2-202ENST00000533170 OSCARQ8IYS5 282 aa10.31□□□□□ -0.76
AP003555.2-202ENST00000533170 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
AP003555.2-202ENST00000533170 PROM2Q8N271 834 aa10.23□□□□□ -0.77
AP003555.2-202ENST00000533170 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
AP003555.2-202ENST00000533170 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
AP003555.2-202ENST00000533170 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
AP003555.2-202ENST00000533170 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
AP003555.2-202ENST00000533170 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
AP003555.2-202ENST00000533170 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
AP003555.2-202ENST00000533170 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
AP003555.2-202ENST00000533170 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
AP003555.2-202ENST00000533170 ARXQ96QS3 562 aa10.01□□□□□ -0.81
AP003555.2-202ENST00000533170 AKT1S1Q96B36 256 aa10□□□□□ -0.81
AP003555.2-202ENST00000533170 RANGAP1P46060 587 aaPredicted RBP9.98□□□□□ -0.81
AP003555.2-202ENST00000533170 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
AP003555.2-202ENST00000533170 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
AP003555.2-202ENST00000533170 REM2Q8IYK8 340 aaPredicted RBP9.93□□□□□ -0.82
AP003555.2-202ENST00000533170 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
AP003555.2-202ENST00000533170 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
AP003555.2-202ENST00000533170 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
AP003555.2-202ENST00000533170 PITPNM1O00562 1244 aa9.83□□□□□ -0.84
AP003555.2-202ENST00000533170 PRKCSHP14314 528 aaPredicted RBP9.81□□□□□ -0.84
AP003555.2-202ENST00000533170 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
AP003555.2-202ENST00000533170 CLEC11AQ9Y240 323 aa9.77□□□□□ -0.85
AP003555.2-202ENST00000533170 PRR29P0C7W0 189 aa9.71□□□□□ -0.86
AP003555.2-202ENST00000533170 MIER1Q8N108 512 aa9.69□□□□□ -0.86
AP003555.2-202ENST00000533170 CREBZFQ9NS37 354 aa9.69□□□□□ -0.86
AP003555.2-202ENST00000533170 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
AP003555.2-202ENST00000533170 HOMEZQ8IX15 550 aa9.67□□□□□ -0.86
AP003555.2-202ENST00000533170 MNX1P50219 401 aaPredicted RBP9.65□□□□□ -0.86
AP003555.2-202ENST00000533170 CHRDL2Q6WN34 429 aa9.65□□□□□ -0.86
AP003555.2-202ENST00000533170 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.87
AP003555.2-202ENST00000533170 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
AP003555.2-202ENST00000533170 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
AP003555.2-202ENST00000533170 CHADLQ6NUI6 762 aa9.58□□□□□ -0.88
AP003555.2-202ENST00000533170 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
AP003555.2-202ENST00000533170 PIP4P2Q8N4L2 257 aa9.57□□□□□ -0.88
AP003555.2-202ENST00000533170 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
AP003555.2-202ENST00000533170 EIF5BO60841 1220 aaKnown RBP9.55□□□□□ -0.88
AP003555.2-202ENST00000533170 PRKAR2AP13861 404 aaKnown RBP9.54□□□□□ -0.88
AP003555.2-202ENST00000533170 BCANQ96GW7 911 aa9.54□□□□□ -0.88
AP003555.2-202ENST00000533170 NUBP1P53384 320 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms