RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 APCP25054 2843 aa5.7□□□□□ -1.5
COLCA1-203ENST00000532918 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
COLCA1-203ENST00000532918 UNC80Q8N2C7 3258 aa5.68□□□□□ -1.5
COLCA1-203ENST00000532918 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
COLCA1-203ENST00000532918 TRIOO75962 3097 aa5.68□□□□□ -1.5
COLCA1-203ENST00000532918 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
COLCA1-203ENST00000532918 CDH23Q9H251 3354 aa5.67□□□□□ -1.5
COLCA1-203ENST00000532918 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
COLCA1-203ENST00000532918 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
COLCA1-203ENST00000532918 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
COLCA1-203ENST00000532918 XIRP2A4UGR9 3374 aa5.64□□□□□ -1.51
COLCA1-203ENST00000532918 TACC2O95359 2948 aa5.62□□□□□ -1.51
COLCA1-203ENST00000532918 SZT2Q5T011 3432 aa5.62□□□□□ -1.51
COLCA1-203ENST00000532918 LAMA2P24043 3122 aaKnown RBP5.62□□□□□ -1.51
COLCA1-203ENST00000532918 LRBAP50851 2863 aa5.6□□□□□ -1.51
COLCA1-203ENST00000532918 ATMQ13315 3056 aa5.6□□□□□ -1.51
COLCA1-203ENST00000532918 COL12A1Q99715 3063 aa5.59□□□□□ -1.51
COLCA1-203ENST00000532918 REV3LO60673 3130 aa5.59□□□□□ -1.51
COLCA1-203ENST00000532918 CRYBG3Q68DQ2 2970 aa5.57□□□□□ -1.52
COLCA1-203ENST00000532918 VCANP13611 3396 aa5.56□□□□□ -1.52
COLCA1-203ENST00000532918 COL6A3P12111 3177 aa5.56□□□□□ -1.52
COLCA1-203ENST00000532918 EYSQ5T1H1 3165 aa5.54□□□□□ -1.52
COLCA1-203ENST00000532918 VPS13AQ96RL7 3174 aa5.54□□□□□ -1.52
COLCA1-203ENST00000532918 FRYLO94915 3013 aa5.53□□□□□ -1.52
COLCA1-203ENST00000532918 H0YAA0 97 aa5.53□□□□□ -1.52
COLCA1-203ENST00000532918 LAMA1P25391 3075 aa5.52□□□□□ -1.53
COLCA1-203ENST00000532918 DMXL2Q8TDJ6 3036 aa5.48□□□□□ -1.53
COLCA1-203ENST00000532918 TENM2Q9NT68 2774 aa5.45□□□□□ -1.54
COLCA1-203ENST00000532918 NBEAQ8NFP9 2946 aa5.44□□□□□ -1.54
COLCA1-203ENST00000532918 TENM1Q9UKZ4 2725 aa5.42□□□□□ -1.54
COLCA1-203ENST00000532918 CELSR2Q9HCU4 2923 aa5.42□□□□□ -1.54
COLCA1-203ENST00000532918 KALRNO60229 2985 aa5.42□□□□□ -1.54
COLCA1-203ENST00000532918 ZZEF1O43149 2961 aa5.41□□□□□ -1.54
COLCA1-203ENST00000532918 DCHS2Q6V1P9 2916 aa5.4□□□□□ -1.54
COLCA1-203ENST00000532918 TENM3Q9P273 2699 aa5.39□□□□□ -1.55
COLCA1-203ENST00000532918 SPTBN5Q9NRC6 3674 aaKnown RBP5.37□□□□□ -1.55
COLCA1-203ENST00000532918 DMXL1Q9Y485 3027 aa5.36□□□□□ -1.55
COLCA1-203ENST00000532918 NF1P21359 2839 aa5.36□□□□□ -1.55
COLCA1-203ENST00000532918 ADGRG4Q8IZF6 3080 aa5.35□□□□□ -1.55
COLCA1-203ENST00000532918 BOD1L1Q8NFC6 3051 aa5.34□□□□□ -1.55
COLCA1-203ENST00000532918 CELSR3Q9NYQ7 3312 aa5.32□□□□□ -1.56
COLCA1-203ENST00000532918 ZANQ9Y493 2812 aa5.31□□□□□ -1.56
COLCA1-203ENST00000532918 ASH1LQ9NR48 2969 aaKnown RBP5.31□□□□□ -1.56
COLCA1-203ENST00000532918 INE1O15225 51 aa5.3□□□□□ -1.56
COLCA1-203ENST00000532918 DNAH14Q0VDD8 3507 aa5.29□□□□□ -1.56
COLCA1-203ENST00000532918 MXRA5Q9NR99 2828 aa5.28□□□□□ -1.56
COLCA1-203ENST00000532918 HRNRQ86YZ3 2850 aaPredicted RBP5.27□□□□□ -1.57
COLCA1-203ENST00000532918 FREM2Q5SZK8 3169 aa5.27□□□□□ -1.57
COLCA1-203ENST00000532918 SPEGQ15772 3267 aa5.24□□□□□ -1.57
COLCA1-203ENST00000532918 MYO15AQ9UKN7 3530 aa5.21□□□□□ -1.58
COLCA1-203ENST00000532918 WDFY3Q8IZQ1 3526 aa5.17□□□□□ -1.58
COLCA1-203ENST00000532918 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
COLCA1-203ENST00000532918 PDZD2O15018 2839 aa5.16□□□□□ -1.58
COLCA1-203ENST00000532918 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
COLCA1-203ENST00000532918 CELSR1Q9NYQ6 3014 aa5.13□□□□□ -1.59
COLCA1-203ENST00000532918 FBN2P35556 2912 aa5.12□□□□□ -1.59
COLCA1-203ENST00000532918 PKD1L1Q8TDX9 2849 aa5.11□□□□□ -1.59
COLCA1-203ENST00000532918 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
COLCA1-203ENST00000532918 CFAP47Q6ZTR5 3102 aa5.1□□□□□ -1.59
COLCA1-203ENST00000532918 TGP01266 2768 aa5.07□□□□□ -1.6
COLCA1-203ENST00000532918 LOC400499M0QZD8 3231 aa5.06□□□□□ -1.6
COLCA1-203ENST00000532918 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
COLCA1-203ENST00000532918 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
COLCA1-203ENST00000532918 OTOGQ6ZRI0 2925 aa5□□□□□ -1.61
COLCA1-203ENST00000532918 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
COLCA1-203ENST00000532918 VWFP04275 2813 aa4.99□□□□□ -1.61
COLCA1-203ENST00000532918 ANK3Q12955 4377 aaKnown RBP4.94□□□□□ -1.62
COLCA1-203ENST00000532918 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
COLCA1-203ENST00000532918 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
COLCA1-203ENST00000532918 DCHS1Q96JQ0 3298 aa4.91□□□□□ -1.62
COLCA1-203ENST00000532918 RELNP78509 3460 aa4.9□□□□□ -1.63
COLCA1-203ENST00000532918 FBN3Q75N90 2809 aa4.89□□□□□ -1.63
COLCA1-203ENST00000532918 NBPF19A0A087WUL8 3843 aa4.85□□□□□ -1.63
COLCA1-203ENST00000532918 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.64
COLCA1-203ENST00000532918 FBN1P35555 2871 aaKnown RBP4.84□□□□□ -1.64
COLCA1-203ENST00000532918 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
COLCA1-203ENST00000532918 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
COLCA1-203ENST00000532918 DMDP11532 3685 aa4.8□□□□□ -1.64
COLCA1-203ENST00000532918 MUC3AQ02505 3323 aa4.8□□□□□ -1.64
COLCA1-203ENST00000532918 LAMA5O15230 3695 aa4.8□□□□□ -1.64
COLCA1-203ENST00000532918 ASPMQ8IZT6 3477 aa4.77□□□□□ -1.65
COLCA1-203ENST00000532918 ZFHX3Q15911 3703 aa4.76□□□□□ -1.65
COLCA1-203ENST00000532918 SRRM2Q9UQ35 2752 aaKnown RBP4.72□□□□□ -1.65
COLCA1-203ENST00000532918 SPENQ96T58 3664 aaKnown RBP4.72□□□□□ -1.65
COLCA1-203ENST00000532918 ZFHX4Q86UP3 3567 aa4.7□□□□□ -1.66
COLCA1-203ENST00000532918 HUWE1Q7Z6Z7 4374 aaKnown RBP4.69□□□□□ -1.66
COLCA1-203ENST00000532918 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
COLCA1-203ENST00000532918 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
COLCA1-203ENST00000532918 MEGF8Q7Z7M0 2845 aa4.66□□□□□ -1.66
COLCA1-203ENST00000532918 SMG1Q96Q15 3661 aaKnown RBP4.64□□□□□ -1.67
COLCA1-203ENST00000532918 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
COLCA1-203ENST00000532918 KRTAP12-3P60328 96 aa4.61□□□□□ -1.67
COLCA1-203ENST00000532918 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
COLCA1-203ENST00000532918 CSMD1Q96PZ7 3565 aa4.57□□□□□ -1.68
COLCA1-203ENST00000532918 COL7A1Q02388 2944 aa4.56□□□□□ -1.68
COLCA1-203ENST00000532918 BSNQ9UPA5 3926 aa4.56□□□□□ -1.68
COLCA1-203ENST00000532918 CUBNO60494 3623 aa4.52□□□□□ -1.69
COLCA1-203ENST00000532918 CSMD2Q7Z408 3487 aa4.51□□□□□ -1.69
COLCA1-203ENST00000532918 SVEP1Q4LDE5 3571 aa4.49□□□□□ -1.69
COLCA1-203ENST00000532918 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms