RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 KRTAP29-1A8MX34 341 aaPredicted RBP8.51□□□□□ -1.05
PCDHA9-202ENST00000532602 NBEAQ8NFP9 2946 aa8.51□□□□□ -1.05
PCDHA9-202ENST00000532602 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
PCDHA9-202ENST00000532602 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
PCDHA9-202ENST00000532602 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
PCDHA9-202ENST00000532602 ROMO1P60602 79 aa8.5□□□□□ -1.05
PCDHA9-202ENST00000532602 WDFY3Q8IZQ1 3526 aa8.49□□□□□ -1.05
PCDHA9-202ENST00000532602 Q5XG85 94 aa8.46□□□□□ -1.05
PCDHA9-202ENST00000532602 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
PCDHA9-202ENST00000532602 A0A0A0MQY5 61 aa8.43□□□□□ -1.06
PCDHA9-202ENST00000532602 FLNCQ14315 2725 aa8.43□□□□□ -1.06
PCDHA9-202ENST00000532602 ZZEF1O43149 2961 aa8.4□□□□□ -1.07
PCDHA9-202ENST00000532602 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
PCDHA9-202ENST00000532602 KMT2BQ9UMN6 2715 aaPredicted RBP8.37□□□□□ -1.07
PCDHA9-202ENST00000532602 HIVEP1P15822 2718 aa8.36□□□□□ -1.07
PCDHA9-202ENST00000532602 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
PCDHA9-202ENST00000532602 APCP25054 2843 aa8.33□□□□□ -1.08
PCDHA9-202ENST00000532602 RELNP78509 3460 aa8.33□□□□□ -1.08
PCDHA9-202ENST00000532602 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
PCDHA9-202ENST00000532602 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
PCDHA9-202ENST00000532602 ASH1LQ9NR48 2969 aaKnown RBP8.3□□□□□ -1.08
PCDHA9-202ENST00000532602 A8MUU9 505 aa8.29□□□□□ -1.08
PCDHA9-202ENST00000532602 DMDP11532 3685 aa8.29□□□□□ -1.08
PCDHA9-202ENST00000532602 C20orf166-AS1Q96NR2 134 aa8.28□□□□□ -1.08
PCDHA9-202ENST00000532602 ZFHX4Q86UP3 3567 aa8.28□□□□□ -1.08
PCDHA9-202ENST00000532602 LAMA5O15230 3695 aa8.27□□□□□ -1.09
PCDHA9-202ENST00000532602 HRNRQ86YZ3 2850 aaPredicted RBP8.25□□□□□ -1.09
PCDHA9-202ENST00000532602 NBPF19A0A087WUL8 3843 aa8.21□□□□□ -1.1
PCDHA9-202ENST00000532602 DCHS1Q96JQ0 3298 aa8.16□□□□□ -1.1
PCDHA9-202ENST00000532602 CELSR2Q9HCU4 2923 aa8.15□□□□□ -1.1
PCDHA9-202ENST00000532602 NIPBLQ6KC79 2804 aaeCLIP8.14□□□□□ -1.11
PCDHA9-202ENST00000532602 ZANQ9Y493 2812 aa8.12□□□□□ -1.11
PCDHA9-202ENST00000532602 H3BS24 57 aa8.08□□□□□ -1.12
PCDHA9-202ENST00000532602 A8MU10 97 aa8.07□□□□□ -1.12
PCDHA9-202ENST00000532602 DCHS2Q6V1P9 2916 aa8.07□□□□□ -1.12
PCDHA9-202ENST00000532602 CSMD1Q96PZ7 3565 aa8.06□□□□□ -1.12
PCDHA9-202ENST00000532602 TNP1P09430 55 aa8.05□□□□□ -1.12
PCDHA9-202ENST00000532602 FBN2P35556 2912 aa8.02□□□□□ -1.13
PCDHA9-202ENST00000532602 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
PCDHA9-202ENST00000532602 KRTAP25-1Q3LHN0 102 aa7.98□□□□□ -1.13
PCDHA9-202ENST00000532602 SMG1Q96Q15 3661 aaKnown RBP7.97□□□□□ -1.13
PCDHA9-202ENST00000532602 MUC3AQ02505 3323 aa7.97□□□□□ -1.13
PCDHA9-202ENST00000532602 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
PCDHA9-202ENST00000532602 XP32Q5T750 250 aa7.95□□□□□ -1.14
PCDHA9-202ENST00000532602 TENM3Q9P273 2699 aa7.91□□□□□ -1.14
PCDHA9-202ENST00000532602 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
PCDHA9-202ENST00000532602 CELSR1Q9NYQ6 3014 aa7.9□□□□□ -1.14
PCDHA9-202ENST00000532602 A6NN06 94 aa7.9□□□□□ -1.15
PCDHA9-202ENST00000532602 NF1P21359 2839 aa7.88□□□□□ -1.15
PCDHA9-202ENST00000532602 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
PCDHA9-202ENST00000532602 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
PCDHA9-202ENST00000532602 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
PCDHA9-202ENST00000532602 TENM2Q9NT68 2774 aa7.77□□□□□ -1.17
PCDHA9-202ENST00000532602 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
PCDHA9-202ENST00000532602 SPENQ96T58 3664 aaKnown RBP7.76□□□□□ -1.17
PCDHA9-202ENST00000532602 TENM1Q9UKZ4 2725 aa7.76□□□□□ -1.17
PCDHA9-202ENST00000532602 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
PCDHA9-202ENST00000532602 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
PCDHA9-202ENST00000532602 C10orf95Q9H7T3 257 aa7.72□□□□□ -1.17
PCDHA9-202ENST00000532602 PDZD2O15018 2839 aa7.71□□□□□ -1.17
PCDHA9-202ENST00000532602 BSNQ9UPA5 3926 aa7.71□□□□□ -1.18
PCDHA9-202ENST00000532602 ZFHX3Q15911 3703 aa7.71□□□□□ -1.18
PCDHA9-202ENST00000532602 PRO2289Q9P1D8 64 aa7.7□□□□□ -1.18
PCDHA9-202ENST00000532602 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
PCDHA9-202ENST00000532602 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
PCDHA9-202ENST00000532602 MXRA5Q9NR99 2828 aa7.67□□□□□ -1.18
PCDHA9-202ENST00000532602 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
PCDHA9-202ENST00000532602 H0YAA0 97 aa7.51□□□□□ -1.21
PCDHA9-202ENST00000532602 CUBNO60494 3623 aa7.5□□□□□ -1.21
PCDHA9-202ENST00000532602 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
PCDHA9-202ENST00000532602 PKD1L1Q8TDX9 2849 aa7.48□□□□□ -1.21
PCDHA9-202ENST00000532602 P0C880 135 aa7.45□□□□□ -1.22
PCDHA9-202ENST00000532602 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
PCDHA9-202ENST00000532602 TRRAPQ9Y4A5 3859 aa7.42□□□□□ -1.22
PCDHA9-202ENST00000532602 VWFP04275 2813 aa7.4□□□□□ -1.22
PCDHA9-202ENST00000532602 TGP01266 2768 aa7.36□□□□□ -1.23
PCDHA9-202ENST00000532602 VPS13CQ709C8 3753 aa7.35□□□□□ -1.23
PCDHA9-202ENST00000532602 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
PCDHA9-202ENST00000532602 KRTAP12-2P59991 146 aa7.15□□□□□ -1.27
PCDHA9-202ENST00000532602 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
PCDHA9-202ENST00000532602 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
PCDHA9-202ENST00000532602 ZNF469Q96JG9 3925 aaPredicted RBP7.09□□□□□ -1.27
PCDHA9-202ENST00000532602 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.28
PCDHA9-202ENST00000532602 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
PCDHA9-202ENST00000532602 SRRM2Q9UQ35 2752 aaKnown RBP7.07□□□□□ -1.28
PCDHA9-202ENST00000532602 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
PCDHA9-202ENST00000532602 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
PCDHA9-202ENST00000532602 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
PCDHA9-202ENST00000532602 FBN3Q75N90 2809 aa6.98□□□□□ -1.29
PCDHA9-202ENST00000532602 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
PCDHA9-202ENST00000532602 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.3
PCDHA9-202ENST00000532602 MEGF8Q7Z7M0 2845 aa6.87□□□□□ -1.31
PCDHA9-202ENST00000532602 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
PCDHA9-202ENST00000532602 COL7A1Q02388 2944 aa6.85□□□□□ -1.31
PCDHA9-202ENST00000532602 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
PCDHA9-202ENST00000532602 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
PCDHA9-202ENST00000532602 DNAH1Q9P2D7 4330 aa6.71□□□□□ -1.34
PCDHA9-202ENST00000532602 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
PCDHA9-202ENST00000532602 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
PCDHA9-202ENST00000532602 PLECQ15149 4684 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms