RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 A0A1B0GVX0 72 aa9.43□□□□□ -0.9
PACS1-209ENST00000529757 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
PACS1-209ENST00000529757 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
PACS1-209ENST00000529757 HCG22E2RYF7 251 aa9.41□□□□□ -0.9
PACS1-209ENST00000529757 ATOX1O00244 68 aa9.37□□□□□ -0.91
PACS1-209ENST00000529757 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
PACS1-209ENST00000529757 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
PACS1-209ENST00000529757 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
PACS1-209ENST00000529757 KRTAP29-1A8MX34 341 aaPredicted RBP9.36□□□□□ -0.91
PACS1-209ENST00000529757 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
PACS1-209ENST00000529757 C8orf87E5RJ46 101 aa9.33□□□□□ -0.92
PACS1-209ENST00000529757 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
PACS1-209ENST00000529757 ABCA13Q86UQ4 5058 aa9.33□□□□□ -0.92
PACS1-209ENST00000529757 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
PACS1-209ENST00000529757 ANAPC13Q9BS18 74 aa9.32□□□□□ -0.92
PACS1-209ENST00000529757 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
PACS1-209ENST00000529757 LINC00313P59037 77 aa9.29□□□□□ -0.92
PACS1-209ENST00000529757 SMIM20Q8N5G0 67 aa9.28□□□□□ -0.92
PACS1-209ENST00000529757 PCP4P48539 62 aa9.27□□□□□ -0.93
PACS1-209ENST00000529757 TMEM254Q8TBM7 123 aa9.27□□□□□ -0.93
PACS1-209ENST00000529757 DMBT1Q9UGM3 2413 aaPredicted RBP9.27□□□□□ -0.93
PACS1-209ENST00000529757 MRPL34Q9BQ48 92 aaKnown RBP9.26□□□□□ -0.93
PACS1-209ENST00000529757 OCR1Q9BZK8 76 aa9.25□□□□□ -0.93
PACS1-209ENST00000529757 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
PACS1-209ENST00000529757 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
PACS1-209ENST00000529757 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
PACS1-209ENST00000529757 J3QL48 77 aa9.23□□□□□ -0.93
PACS1-209ENST00000529757 KRTAP16-1A8MUX0 517 aa9.2□□□□□ -0.94
PACS1-209ENST00000529757 NDUFS5O43920 106 aa9.19□□□□□ -0.94
PACS1-209ENST00000529757 COX7CP15954 63 aa9.19□□□□□ -0.94
PACS1-209ENST00000529757 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
PACS1-209ENST00000529757 IGLV7-46A0A075B6I9 117 aa9.16□□□□□ -0.94
PACS1-209ENST00000529757 TP53AIP1Q9HCN2 124 aa9.16□□□□□ -0.94
PACS1-209ENST00000529757 UQCRQO14949 82 aa9.15□□□□□ -0.94
PACS1-209ENST00000529757 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
PACS1-209ENST00000529757 PRR4Q16378 134 aa9.13□□□□□ -0.95
PACS1-209ENST00000529757 CCDC179H3BU77 68 aa9.11□□□□□ -0.95
PACS1-209ENST00000529757 C5orf47Q569G3 176 aa9.1□□□□□ -0.95
PACS1-209ENST00000529757 KRTAP13-3Q3SY46 172 aa9.07□□□□□ -0.96
PACS1-209ENST00000529757 TRAV22A0A0B4J277 110 aa9.07□□□□□ -0.96
PACS1-209ENST00000529757 C20orf197Q8N268 126 aa9.07□□□□□ -0.96
PACS1-209ENST00000529757 H0Y9P7 68 aa9.06□□□□□ -0.96
PACS1-209ENST00000529757 MP68P56378 58 aa9.06□□□□□ -0.96
PACS1-209ENST00000529757 C20orf166-AS1Q96NR2 134 aa9.06□□□□□ -0.96
PACS1-209ENST00000529757 A8MUU9 505 aa9.04□□□□□ -0.96
PACS1-209ENST00000529757 Q5W150 140 aa9.02□□□□□ -0.97
PACS1-209ENST00000529757 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
PACS1-209ENST00000529757 PCLOQ9Y6V0 5065 aa9.01□□□□□ -0.97
PACS1-209ENST00000529757 A0A0U1RQV1 116 aa9□□□□□ -0.97
PACS1-209ENST00000529757 SNURFQ9Y675 71 aa9□□□□□ -0.97
PACS1-209ENST00000529757 H3BPC8 53 aa9□□□□□ -0.97
PACS1-209ENST00000529757 KLKP1Q107X0 134 aa9□□□□□ -0.97
PACS1-209ENST00000529757 Q75L30 129 aa9□□□□□ -0.97
PACS1-209ENST00000529757 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
PACS1-209ENST00000529757 XP32Q5T750 250 aa8.98□□□□□ -0.97
PACS1-209ENST00000529757 C1orf64Q8NEQ6 169 aa8.97□□□□□ -0.97
PACS1-209ENST00000529757 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
PACS1-209ENST00000529757 CYSTM1Q9H1C7 97 aa8.94□□□□□ -0.98
PACS1-209ENST00000529757 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
PACS1-209ENST00000529757 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
PACS1-209ENST00000529757 NDUFC1O43677 76 aa8.9□□□□□ -0.98
PACS1-209ENST00000529757 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
PACS1-209ENST00000529757 LPAP08519 4548 aa8.86□□□□□ -0.99
PACS1-209ENST00000529757 H7BZZ5 65 aa8.86□□□□□ -0.99
PACS1-209ENST00000529757 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
PACS1-209ENST00000529757 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
PACS1-209ENST00000529757 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
PACS1-209ENST00000529757 HERC1Q15751 4861 aa8.84□□□□□ -1
PACS1-209ENST00000529757 PCOTHQ58A44 107 aa8.81□□□□□ -1
PACS1-209ENST00000529757 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
PACS1-209ENST00000529757 LRP2P98164 4655 aa8.79□□□□□ -1
PACS1-209ENST00000529757 TMEM258P61165 79 aa8.78□□□□□ -1
PACS1-209ENST00000529757 SPINK7P58062 85 aa8.75□□□□□ -1.01
PACS1-209ENST00000529757 HMCN2Q8NDA2 5059 aa8.73□□□□□ -1.01
PACS1-209ENST00000529757 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
PACS1-209ENST00000529757 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
PACS1-209ENST00000529757 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
PACS1-209ENST00000529757 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.02
PACS1-209ENST00000529757 HRES1P13985 223 aa8.7□□□□□ -1.02
PACS1-209ENST00000529757 ATP5EP56381 51 aaPredicted RBP8.69□□□□□ -1.02
PACS1-209ENST00000529757 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
PACS1-209ENST00000529757 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
PACS1-209ENST00000529757 DMAC1Q96GE9 116 aa8.56□□□□□ -1.04
PACS1-209ENST00000529757 COX6B2Q6YFQ2 88 aa8.51□□□□□ -1.05
PACS1-209ENST00000529757 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
PACS1-209ENST00000529757 A8MUN3 132 aa8.5□□□□□ -1.05
PACS1-209ENST00000529757 ACYP2P14621 99 aa8.5□□□□□ -1.05
PACS1-209ENST00000529757 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
PACS1-209ENST00000529757 KRTAP3-1Q9BYR8 98 aa8.47□□□□□ -1.05
PACS1-209ENST00000529757 MPLKIPQ8TAP9 179 aa8.46□□□□□ -1.05
PACS1-209ENST00000529757 COA5Q86WW8 74 aa8.46□□□□□ -1.06
PACS1-209ENST00000529757 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
PACS1-209ENST00000529757 RPS28P62857 69 aaKnown RBP8.44□□□□□ -1.06
PACS1-209ENST00000529757 CHKB-CPT1BH3BT56 60 aa8.37□□□□□ -1.07
PACS1-209ENST00000529757 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.08
PACS1-209ENST00000529757 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.08
PACS1-209ENST00000529757 MUC2Q02817 5179 aa8.27□□□□□ -1.09
PACS1-209ENST00000529757 S4R3F8 94 aa8.27□□□□□ -1.09
PACS1-209ENST00000529757 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
PACS1-209ENST00000529757 KRTAP19-2Q3LHN2 52 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms