RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 SPENQ96T58 3664 aaKnown RBP2.73□□□□□ -1.97
CASP4-207ENST00000529565 CRYBG3Q68DQ2 2970 aa2.73□□□□□ -1.97
CASP4-207ENST00000529565 KRTAP29-1A8MX34 341 aaPredicted RBP2.73□□□□□ -1.97
CASP4-207ENST00000529565 SEC61BP60468 96 aaKnown RBP2.73□□□□□ -1.97
CASP4-207ENST00000529565 NF1P21359 2839 aa2.72□□□□□ -1.97
CASP4-207ENST00000529565 DCHS2Q6V1P9 2916 aa2.72□□□□□ -1.97
CASP4-207ENST00000529565 MXRA5Q9NR99 2828 aa2.72□□□□□ -1.97
CASP4-207ENST00000529565 RELNP78509 3460 aa2.72□□□□□ -1.97
CASP4-207ENST00000529565 Q8N9P0 234 aaPredicted RBP2.71□□□□□ -1.97
CASP4-207ENST00000529565 ASH1LQ9NR48 2969 aaKnown RBP2.71□□□□□ -1.98
CASP4-207ENST00000529565 CFAP47Q6ZTR5 3102 aa2.71□□□□□ -1.98
CASP4-207ENST00000529565 SPINK7P58062 85 aa2.71□□□□□ -1.98
CASP4-207ENST00000529565 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
CASP4-207ENST00000529565 Q1T7F1 81 aa2.7□□□□□ -1.98
CASP4-207ENST00000529565 KRTAP13-2Q52LG2 175 aa2.7□□□□□ -1.98
CASP4-207ENST00000529565 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
CASP4-207ENST00000529565 ASPMQ8IZT6 3477 aa2.68□□□□□ -1.98
CASP4-207ENST00000529565 CSAG1Q6PB30 78 aa2.67□□□□□ -1.98
CASP4-207ENST00000529565 KRTAP23-1A1A580 65 aa2.67□□□□□ -1.98
CASP4-207ENST00000529565 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
CASP4-207ENST00000529565 DMAC1Q96GE9 116 aa2.67□□□□□ -1.98
CASP4-207ENST00000529565 MUC3AQ02505 3323 aa2.66□□□□□ -1.98
CASP4-207ENST00000529565 CYSTM1Q9H1C7 97 aa2.66□□□□□ -1.98
CASP4-207ENST00000529565 S4R3F8 94 aa2.66□□□□□ -1.98
CASP4-207ENST00000529565 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
CASP4-207ENST00000529565 DCHS1Q96JQ0 3298 aa2.66□□□□□ -1.98
CASP4-207ENST00000529565 OTOGQ6ZRI0 2925 aa2.65□□□□□ -1.99
CASP4-207ENST00000529565 NOTCH2NLQ7Z3S9 236 aa2.65□□□□□ -1.99
CASP4-207ENST00000529565 DMBT1Q9UGM3 2413 aaPredicted RBP2.65□□□□□ -1.99
CASP4-207ENST00000529565 CSMD2Q7Z408 3487 aa2.64□□□□□ -1.99
CASP4-207ENST00000529565 A0A1B0GU33 70 aa2.64□□□□□ -1.99
CASP4-207ENST00000529565 KRTAP1-4P0C5Y4 121 aa2.63□□□□□ -1.99
CASP4-207ENST00000529565 TENM3Q9P273 2699 aa2.63□□□□□ -1.99
CASP4-207ENST00000529565 LOC100996750A0A140TA64 210 aa2.62□□□□□ -1.99
CASP4-207ENST00000529565 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
CASP4-207ENST00000529565 M0R2T5 61 aa2.61□□□□□ -1.99
CASP4-207ENST00000529565 RPL37P61927 97 aaKnown RBP2.61□□□□□ -1.99
CASP4-207ENST00000529565 TENM1Q9UKZ4 2725 aa2.61□□□□□ -1.99
CASP4-207ENST00000529565 CRIPTQ9P021 101 aa2.61□□□□□ -1.99
CASP4-207ENST00000529565 CSMD1Q96PZ7 3565 aa2.61□□□□□ -1.99
CASP4-207ENST00000529565 CELSR1Q9NYQ6 3014 aa2.61□□□□□ -1.99
CASP4-207ENST00000529565 A0A0D9SG42 100 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 LAMA5O15230 3695 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 A8MUU9 505 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 SPINT4Q6UDR6 99 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 C20orf166-AS1Q96NR2 134 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 A0A1B0GVY2 172 aa2.6□□□□□ -1.99
CASP4-207ENST00000529565 Q5VV11 94 aa2.59□□□□□ -2
CASP4-207ENST00000529565 H1FX-AS1Q4G0G2 97 aa2.58□□□□□ -2
CASP4-207ENST00000529565 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
CASP4-207ENST00000529565 ANK3Q12955 4377 aaKnown RBP2.57□□□□□ -2
CASP4-207ENST00000529565 TENM2Q9NT68 2774 aa2.57□□□□□ -2
CASP4-207ENST00000529565 R4GN34 69 aa2.57□□□□□ -2
CASP4-207ENST00000529565 FLG2Q5D862 2391 aaPredicted RBP2.57□□□□□ -2
CASP4-207ENST00000529565 PRAC1Q96KF2 57 aa2.57□□□□□ -2
CASP4-207ENST00000529565 CAMK2N1Q7Z7J9 78 aa2.56□□□□□ -2
CASP4-207ENST00000529565 NBPF19A0A087WUL8 3843 aa2.55□□□□□ -2
CASP4-207ENST00000529565 LCA10Q71F78 164 aa2.54□□□□□ -2
CASP4-207ENST00000529565 VWFP04275 2813 aa2.54□□□□□ -2
CASP4-207ENST00000529565 TPRXLQ17RH7 258 aa2.54□□□□□ -2
CASP4-207ENST00000529565 FBN1P35555 2871 aaKnown RBP2.53□□□□□ -2
CASP4-207ENST00000529565 XP32Q5T750 250 aa2.53□□□□□ -2
CASP4-207ENST00000529565 KRTAP10-8P60410 259 aa2.52□□□□□ -2.01
CASP4-207ENST00000529565 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
CASP4-207ENST00000529565 M0QZ58 72 aa2.52□□□□□ -2.01
CASP4-207ENST00000529565 KRTAP16-1A8MUX0 517 aa2.52□□□□□ -2.01
CASP4-207ENST00000529565 SVEP1Q4LDE5 3571 aa2.51□□□□□ -2.01
CASP4-207ENST00000529565 BSNQ9UPA5 3926 aa2.51□□□□□ -2.01
CASP4-207ENST00000529565 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
CASP4-207ENST00000529565 KRTAP13-3Q3SY46 172 aa2.5□□□□□ -2.01
CASP4-207ENST00000529565 TGP01266 2768 aa2.5□□□□□ -2.01
CASP4-207ENST00000529565 ROMO1P60602 79 aa2.47□□□□□ -2.01
CASP4-207ENST00000529565 FBN3Q75N90 2809 aa2.47□□□□□ -2.01
CASP4-207ENST00000529565 PLAC4Q8WY50 150 aa2.47□□□□□ -2.01
CASP4-207ENST00000529565 PKD1L1Q8TDX9 2849 aa2.46□□□□□ -2.02
CASP4-207ENST00000529565 CUBNO60494 3623 aa2.45□□□□□ -2.02
CASP4-207ENST00000529565 KRTAP3-1Q9BYR8 98 aa2.43□□□□□ -2.02
CASP4-207ENST00000529565 AKAP9Q99996 3911 aa2.43□□□□□ -2.02
CASP4-207ENST00000529565 TRRAPQ9Y4A5 3859 aa2.41□□□□□ -2.02
CASP4-207ENST00000529565 A8MU10 97 aa2.4□□□□□ -2.02
CASP4-207ENST00000529565 CSMD3Q7Z407 3707 aa2.4□□□□□ -2.03
CASP4-207ENST00000529565 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CASP4-207ENST00000529565 A6NN06 94 aa2.39□□□□□ -2.03
CASP4-207ENST00000529565 HUWE1Q7Z6Z7 4374 aaKnown RBP2.38□□□□□ -2.03
CASP4-207ENST00000529565 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
CASP4-207ENST00000529565 MEGF8Q7Z7M0 2845 aa2.37□□□□□ -2.03
CASP4-207ENST00000529565 MT1HL1P0DM35 61 aa2.36□□□□□ -2.03
CASP4-207ENST00000529565 TNP1P09430 55 aa2.33□□□□□ -2.04
CASP4-207ENST00000529565 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
CASP4-207ENST00000529565 ALMS1Q8TCU4 4167 aa2.33□□□□□ -2.04
CASP4-207ENST00000529565 H0YAA0 97 aa2.33□□□□□ -2.04
CASP4-207ENST00000529565 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
CASP4-207ENST00000529565 P0C880 135 aa2.31□□□□□ -2.04
CASP4-207ENST00000529565 DNAH9Q9NYC9 4486 aa2.31□□□□□ -2.04
CASP4-207ENST00000529565 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
CASP4-207ENST00000529565 ZNF469Q96JG9 3925 aaPredicted RBP2.3□□□□□ -2.04
CASP4-207ENST00000529565 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
CASP4-207ENST00000529565 PRKDCP78527 4128 aaKnown RBP2.29□□□□□ -2.04
CASP4-207ENST00000529565 VPS13CQ709C8 3753 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms