RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 UBR4Q5T4S7 5183 aa13.47□□□□□ -0.25
LTBP3-213ENST00000529371 RPL37P61927 97 aaKnown RBP13.46□□□□□ -0.25
LTBP3-213ENST00000529371 C8orf87E5RJ46 101 aa13.45□□□□□ -0.26
LTBP3-213ENST00000529371 A8MWP4 228 aa13.44□□□□□ -0.26
LTBP3-213ENST00000529371 Q6ZVQ6 151 aa13.43□□□□□ -0.26
LTBP3-213ENST00000529371 UBL5Q9BZL1 73 aa13.43□□□□□ -0.26
LTBP3-213ENST00000529371 BPY2O14599 106 aa13.4□□□□□ -0.26
LTBP3-213ENST00000529371 PCOTHQ58A44 107 aa13.4□□□□□ -0.26
LTBP3-213ENST00000529371 Q75L30 129 aa13.4□□□□□ -0.26
LTBP3-213ENST00000529371 LINC00846Q9NV44 126 aa13.39□□□□□ -0.27
LTBP3-213ENST00000529371 NOTCH2NLQ7Z3S9 236 aa13.36□□□□□ -0.27
LTBP3-213ENST00000529371 IGKV3D-7A0A0C4DH55 119 aa13.35□□□□□ -0.27
LTBP3-213ENST00000529371 C20orf166-AS1Q96NR2 134 aa13.35□□□□□ -0.27
LTBP3-213ENST00000529371 ATP11AUNQ6ZP68 121 aa13.33□□□□□ -0.28
LTBP3-213ENST00000529371 PRR15Q8IV56 129 aa13.33□□□□□ -0.28
LTBP3-213ENST00000529371 A8MUU9 505 aa13.32□□□□□ -0.28
LTBP3-213ENST00000529371 MUC17Q685J3 4493 aa13.32□□□□□ -0.28
LTBP3-213ENST00000529371 KRTAP16-1A8MUX0 517 aa13.31□□□□□ -0.28
LTBP3-213ENST00000529371 C8orf17Q9NRJ1 99 aa13.31□□□□□ -0.28
LTBP3-213ENST00000529371 ACYP1P07311 99 aa13.28□□□□□ -0.28
LTBP3-213ENST00000529371 K7EQZ3 153 aa13.27□□□□□ -0.29
LTBP3-213ENST00000529371 A0A0U1RQV1 116 aa13.23□□□□□ -0.29
LTBP3-213ENST00000529371 FAM240AA0A1B0GVK7 77 aa13.23□□□□□ -0.29
LTBP3-213ENST00000529371 KRTAP4-1Q9BYQ7 146 aa13.19□□□□□ -0.3
LTBP3-213ENST00000529371 RNF213Q63HN8 5207 aa13.19□□□□□ -0.3
LTBP3-213ENST00000529371 MMP24-AS1A0A0U1RRL7 71 aa13.18□□□□□ -0.3
LTBP3-213ENST00000529371 Q8N9L7 120 aa13.18□□□□□ -0.3
LTBP3-213ENST00000529371 TMEM254Q8TBM7 123 aa13.16□□□□□ -0.3
LTBP3-213ENST00000529371 hDV103S1A0JD37 113 aa13.15□□□□□ -0.3
LTBP3-213ENST00000529371 CXCL6P80162 114 aa13.14□□□□□ -0.31
LTBP3-213ENST00000529371 MRPL34Q9BQ48 92 aaKnown RBP13.13□□□□□ -0.31
LTBP3-213ENST00000529371 J3QR89 54 aa13.12□□□□□ -0.31
LTBP3-213ENST00000529371 Q8N9P0 234 aaPredicted RBP13.12□□□□□ -0.31
LTBP3-213ENST00000529371 WFDC13Q8IUB5 93 aa13.09□□□□□ -0.31
LTBP3-213ENST00000529371 CASC2Q6XLA1 102 aa13.08□□□□□ -0.32
LTBP3-213ENST00000529371 NDUFS5O43920 106 aa13.06□□□□□ -0.32
LTBP3-213ENST00000529371 ATP5EP2Q5VTU8 51 aa13.06□□□□□ -0.32
LTBP3-213ENST00000529371 ZCCHC13Q8WW36 166 aaKnown RBP13.05□□□□□ -0.32
LTBP3-213ENST00000529371 HCG22E2RYF7 251 aa13.03□□□□□ -0.32
LTBP3-213ENST00000529371 LINC00643Q86TS7 51 aa12.98□□□□□ -0.33
LTBP3-213ENST00000529371 MUC2Q02817 5179 aa12.97□□□□□ -0.33
LTBP3-213ENST00000529371 HIST1H4AP62805 103 aaKnown RBP12.91□□□□□ -0.34
LTBP3-213ENST00000529371 COX6B2Q6YFQ2 88 aa12.86□□□□□ -0.35
LTBP3-213ENST00000529371 K7ERU9 68 aa12.84□□□□□ -0.35
LTBP3-213ENST00000529371 SPINK7P58062 85 aa12.8□□□□□ -0.36
LTBP3-213ENST00000529371 KRTAP19-2Q3LHN2 52 aa12.77□□□□□ -0.37
LTBP3-213ENST00000529371 TP53AIP1Q9HCN2 124 aa12.77□□□□□ -0.37
LTBP3-213ENST00000529371 Q5W150 140 aa12.74□□□□□ -0.37
LTBP3-213ENST00000529371 RBM12B-AS1Q9P1G2 102 aa12.74□□□□□ -0.37
LTBP3-213ENST00000529371 FAT4Q6V0I7 4981 aa12.73□□□□□ -0.37
LTBP3-213ENST00000529371 HRES1P13985 223 aa12.72□□□□□ -0.37
LTBP3-213ENST00000529371 LCE2CQ5TA81 110 aa12.72□□□□□ -0.37
LTBP3-213ENST00000529371 A0A087WVE0 104 aa12.71□□□□□ -0.37
LTBP3-213ENST00000529371 FAM236DA0A1B0GTK5 79 aa12.71□□□□□ -0.37
LTBP3-213ENST00000529371 FAM236CP0DP71 79 aa12.71□□□□□ -0.37
LTBP3-213ENST00000529371 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
LTBP3-213ENST00000529371 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
LTBP3-213ENST00000529371 C7orf65Q6ZTY9 151 aa12.68□□□□□ -0.38
LTBP3-213ENST00000529371 LCE2AQ5TA79 106 aaPredicted RBP12.67□□□□□ -0.38
LTBP3-213ENST00000529371 MPLKIPQ8TAP9 179 aa12.61□□□□□ -0.39
LTBP3-213ENST00000529371 MT1HP80294 61 aa12.59□□□□□ -0.39
LTBP3-213ENST00000529371 UQCRQO14949 82 aa12.56□□□□□ -0.4
LTBP3-213ENST00000529371 TRAV22A0A0B4J277 110 aa12.55□□□□□ -0.4
LTBP3-213ENST00000529371 IMUPQ9GZP8 106 aa12.53□□□□□ -0.4
LTBP3-213ENST00000529371 M0R2T5 61 aa12.52□□□□□ -0.41
LTBP3-213ENST00000529371 MT-ATP8P03928 68 aa12.52□□□□□ -0.41
LTBP3-213ENST00000529371 SCGB1A1P11684 91 aa12.48□□□□□ -0.41
LTBP3-213ENST00000529371 H0Y9P7 68 aa12.45□□□□□ -0.42
LTBP3-213ENST00000529371 ATOX1O00244 68 aa12.45□□□□□ -0.42
LTBP3-213ENST00000529371 LOC101927531A0A1B0GV80 90 aa12.43□□□□□ -0.42
LTBP3-213ENST00000529371 OCR1Q9BZK8 76 aa12.41□□□□□ -0.42
LTBP3-213ENST00000529371 C4orf26Q17RF5 130 aa12.37□□□□□ -0.43
LTBP3-213ENST00000529371 MP68P56378 58 aa12.36□□□□□ -0.43
LTBP3-213ENST00000529371 CYP4F30PQ9H0H9 118 aa12.36□□□□□ -0.43
LTBP3-213ENST00000529371 FAM236AA0A1B0GUQ0 79 aa12.33□□□□□ -0.44
LTBP3-213ENST00000529371 FAM236BA0A1B0GV22 79 aa12.33□□□□□ -0.44
LTBP3-213ENST00000529371 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
LTBP3-213ENST00000529371 FLGP20930 4061 aaPredicted RBP12.31□□□□□ -0.44
LTBP3-213ENST00000529371 H1FX-AS1Q4G0G2 97 aa12.3□□□□□ -0.44
LTBP3-213ENST00000529371 C1orf64Q8NEQ6 169 aa12.3□□□□□ -0.44
LTBP3-213ENST00000529371 LINC00208Q96KT6 92 aa12.29□□□□□ -0.44
LTBP3-213ENST00000529371 KRTAP10-6P60371 365 aaPredicted RBP12.26□□□□□ -0.45
LTBP3-213ENST00000529371 SMIM20Q8N5G0 67 aa12.25□□□□□ -0.45
LTBP3-213ENST00000529371 H3BPC8 53 aa12.22□□□□□ -0.45
LTBP3-213ENST00000529371 LORP23490 312 aaPredicted RBP12.2□□□□□ -0.46
LTBP3-213ENST00000529371 TRAV7A0A075B6U4 112 aa12.17□□□□□ -0.46
LTBP3-213ENST00000529371 KRTAP3-1Q9BYR8 98 aa12.1□□□□□ -0.47
LTBP3-213ENST00000529371 KLKP1Q107X0 134 aa12.08□□□□□ -0.48
LTBP3-213ENST00000529371 S4R3F8 94 aa12.05□□□□□ -0.48
LTBP3-213ENST00000529371 A8MUN3 132 aa11.97□□□□□ -0.49
LTBP3-213ENST00000529371 SERP2Q8N6R1 65 aa11.97□□□□□ -0.49
LTBP3-213ENST00000529371 KRTAP9-8Q9BYQ0 159 aa11.95□□□□□ -0.5
LTBP3-213ENST00000529371 LCA10Q71F78 164 aa11.92□□□□□ -0.5
LTBP3-213ENST00000529371 MT2AP02795 61 aa11.88□□□□□ -0.51
LTBP3-213ENST00000529371 CSAG1Q6PB30 78 aa11.88□□□□□ -0.51
LTBP3-213ENST00000529371 KRTAP9-2Q9BYQ4 174 aa11.88□□□□□ -0.51
LTBP3-213ENST00000529371 SNURFQ9Y675 71 aa11.87□□□□□ -0.51
LTBP3-213ENST00000529371 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
LTBP3-213ENST00000529371 C20orf197Q8N268 126 aa11.85□□□□□ -0.51
LTBP3-213ENST00000529371 KRTAP10-10P60014 251 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 250.6 ms