RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 LRBAP50851 2863 aa4.13□□□□□ -1.75
CTNND1-218ENST00000528232 DMBT1Q9UGM3 2413 aaPredicted RBP4.13□□□□□ -1.75
CTNND1-218ENST00000528232 NBEAL2Q6ZNJ1 2754 aa4.12□□□□□ -1.75
CTNND1-218ENST00000528232 STAB2Q8WWQ8 2551 aa4.12□□□□□ -1.75
CTNND1-218ENST00000528232 NBEAL1Q6ZS30 2694 aa4.12□□□□□ -1.75
CTNND1-218ENST00000528232 UBR5O95071 2799 aaPredicted RBP4.11□□□□□ -1.75
CTNND1-218ENST00000528232 BOD1L1Q8NFC6 3051 aa4.11□□□□□ -1.75
CTNND1-218ENST00000528232 ITPR2Q14571 2701 aa4.1□□□□□ -1.75
CTNND1-218ENST00000528232 BAHCC1Q9P281 2608 aa4.1□□□□□ -1.75
CTNND1-218ENST00000528232 DMXL2Q8TDJ6 3036 aa4.1□□□□□ -1.75
CTNND1-218ENST00000528232 UTP20O75691 2785 aaKnown RBP4.1□□□□□ -1.75
CTNND1-218ENST00000528232 TACC2O95359 2948 aa4.1□□□□□ -1.75
CTNND1-218ENST00000528232 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CTNND1-218ENST00000528232 KALRNO60229 2985 aa4.09□□□□□ -1.75
CTNND1-218ENST00000528232 KRTAP13-2Q52LG2 175 aa4.08□□□□□ -1.76
CTNND1-218ENST00000528232 ATMQ13315 3056 aa4.07□□□□□ -1.76
CTNND1-218ENST00000528232 ITPR1Q14643 2758 aa4.07□□□□□ -1.76
CTNND1-218ENST00000528232 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
CTNND1-218ENST00000528232 FLNCQ14315 2725 aa4.06□□□□□ -1.76
CTNND1-218ENST00000528232 ADGRG4Q8IZF6 3080 aa4.06□□□□□ -1.76
CTNND1-218ENST00000528232 HRNRQ86YZ3 2850 aaPredicted RBP4.05□□□□□ -1.76
CTNND1-218ENST00000528232 COL12A1Q99715 3063 aa4.04□□□□□ -1.76
CTNND1-218ENST00000528232 NSD1Q96L73 2696 aaPredicted RBP4.03□□□□□ -1.76
CTNND1-218ENST00000528232 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
CTNND1-218ENST00000528232 LOC400499M0QZD8 3231 aa4.02□□□□□ -1.77
CTNND1-218ENST00000528232 APCP25054 2843 aa4.02□□□□□ -1.77
CTNND1-218ENST00000528232 ASH1LQ9NR48 2969 aaKnown RBP4.02□□□□□ -1.77
CTNND1-218ENST00000528232 ZZEF1O43149 2961 aa4.01□□□□□ -1.77
CTNND1-218ENST00000528232 WDFY3Q8IZQ1 3526 aa4.01□□□□□ -1.77
CTNND1-218ENST00000528232 CFAP47Q6ZTR5 3102 aa4.01□□□□□ -1.77
CTNND1-218ENST00000528232 P0C880 135 aa4□□□□□ -1.77
CTNND1-218ENST00000528232 DMXL1Q9Y485 3027 aa4□□□□□ -1.77
CTNND1-218ENST00000528232 LCE2CQ5TA81 110 aa4□□□□□ -1.77
CTNND1-218ENST00000528232 HIVEP1P15822 2718 aa3.97□□□□□ -1.77
CTNND1-218ENST00000528232 DMDP11532 3685 aa3.96□□□□□ -1.78
CTNND1-218ENST00000528232 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
CTNND1-218ENST00000528232 TNP1P09430 55 aa3.94□□□□□ -1.78
CTNND1-218ENST00000528232 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
CTNND1-218ENST00000528232 MUC3AQ02505 3323 aa3.92□□□□□ -1.78
CTNND1-218ENST00000528232 CRYBG3Q68DQ2 2970 aa3.91□□□□□ -1.78
CTNND1-218ENST00000528232 CELSR2Q9HCU4 2923 aa3.9□□□□□ -1.78
CTNND1-218ENST00000528232 H0YAA0 97 aa3.9□□□□□ -1.79
CTNND1-218ENST00000528232 ZFHX4Q86UP3 3567 aa3.9□□□□□ -1.79
CTNND1-218ENST00000528232 ZANQ9Y493 2812 aa3.89□□□□□ -1.79
CTNND1-218ENST00000528232 NIPBLQ6KC79 2804 aaeCLIP3.89□□□□□ -1.791e-6■□□□□ 9
CTNND1-218ENST00000528232 ASPMQ8IZT6 3477 aa3.88□□□□□ -1.79
CTNND1-218ENST00000528232 LAMA5O15230 3695 aa3.86□□□□□ -1.79
CTNND1-218ENST00000528232 TENM4Q6N022 2769 aa3.84□□□□□ -1.8
CTNND1-218ENST00000528232 RELNP78509 3460 aa3.84□□□□□ -1.8
CTNND1-218ENST00000528232 DCHS2Q6V1P9 2916 aa3.83□□□□□ -1.8
CTNND1-218ENST00000528232 DCHS1Q96JQ0 3298 aa3.83□□□□□ -1.8
CTNND1-218ENST00000528232 SMG1Q96Q15 3661 aaKnown RBP3.83□□□□□ -1.8
CTNND1-218ENST00000528232 XP32Q5T750 250 aa3.82□□□□□ -1.8
CTNND1-218ENST00000528232 FBN2P35556 2912 aa3.8□□□□□ -1.8
CTNND1-218ENST00000528232 CSMD1Q96PZ7 3565 aa3.78□□□□□ -1.8
CTNND1-218ENST00000528232 NF1P21359 2839 aa3.77□□□□□ -1.81
CTNND1-218ENST00000528232 PDZD2O15018 2839 aa3.77□□□□□ -1.81
CTNND1-218ENST00000528232 INE1O15225 51 aa3.77□□□□□ -1.81
CTNND1-218ENST00000528232 TPRXLQ17RH7 258 aa3.76□□□□□ -1.81
CTNND1-218ENST00000528232 MXRA5Q9NR99 2828 aa3.76□□□□□ -1.81
CTNND1-218ENST00000528232 ANK3Q12955 4377 aaKnown RBP3.76□□□□□ -1.81
CTNND1-218ENST00000528232 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
CTNND1-218ENST00000528232 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
CTNND1-218ENST00000528232 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
CTNND1-218ENST00000528232 A0A1B0GVY2 172 aa3.75□□□□□ -1.81
CTNND1-218ENST00000528232 SVEP1Q4LDE5 3571 aa3.69□□□□□ -1.82
CTNND1-218ENST00000528232 CELSR1Q9NYQ6 3014 aa3.69□□□□□ -1.82
CTNND1-218ENST00000528232 BSNQ9UPA5 3926 aa3.68□□□□□ -1.82
CTNND1-218ENST00000528232 TENM3Q9P273 2699 aa3.68□□□□□ -1.82
CTNND1-218ENST00000528232 SPENQ96T58 3664 aaKnown RBP3.67□□□□□ -1.82
CTNND1-218ENST00000528232 PRO2289Q9P1D8 64 aa3.67□□□□□ -1.82
CTNND1-218ENST00000528232 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
CTNND1-218ENST00000528232 NBPF19A0A087WUL8 3843 aa3.63□□□□□ -1.83
CTNND1-218ENST00000528232 PKD1L1Q8TDX9 2849 aa3.63□□□□□ -1.83
CTNND1-218ENST00000528232 TENM1Q9UKZ4 2725 aa3.63□□□□□ -1.83
CTNND1-218ENST00000528232 KRTAP13-4Q3LI77 160 aa3.6□□□□□ -1.83
CTNND1-218ENST00000528232 OTOGQ6ZRI0 2925 aa3.59□□□□□ -1.83
CTNND1-218ENST00000528232 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
CTNND1-218ENST00000528232 VWFP04275 2813 aa3.57□□□□□ -1.84
CTNND1-218ENST00000528232 KRTAP10-10P60014 251 aa3.57□□□□□ -1.84
CTNND1-218ENST00000528232 TGP01266 2768 aa3.54□□□□□ -1.84
CTNND1-218ENST00000528232 HUWE1Q7Z6Z7 4374 aaKnown RBP3.53□□□□□ -1.84
CTNND1-218ENST00000528232 KRTAP12-2P59991 146 aa3.53□□□□□ -1.84
CTNND1-218ENST00000528232 KRTAP3-1Q9BYR8 98 aa3.53□□□□□ -1.84
CTNND1-218ENST00000528232 FBN1P35555 2871 aaKnown RBP3.52□□□□□ -1.85
CTNND1-218ENST00000528232 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
CTNND1-218ENST00000528232 CSMD2Q7Z408 3487 aa3.52□□□□□ -1.85
CTNND1-218ENST00000528232 CUBNO60494 3623 aa3.52□□□□□ -1.85
CTNND1-218ENST00000528232 ALMS1Q8TCU4 4167 aa3.5□□□□□ -1.85
CTNND1-218ENST00000528232 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
CTNND1-218ENST00000528232 SRRM2Q9UQ35 2752 aaKnown RBP3.49□□□□□ -1.85
CTNND1-218ENST00000528232 VPS13CQ709C8 3753 aa3.48□□□□□ -1.85
CTNND1-218ENST00000528232 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
CTNND1-218ENST00000528232 TRRAPQ9Y4A5 3859 aa3.44□□□□□ -1.86
CTNND1-218ENST00000528232 AKAP9Q99996 3911 aa3.43□□□□□ -1.86
CTNND1-218ENST00000528232 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
CTNND1-218ENST00000528232 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.86
CTNND1-218ENST00000528232 MT1HL1P0DM35 61 aa3.4□□□□□ -1.87
CTNND1-218ENST00000528232 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
CTNND1-218ENST00000528232 ZNF469Q96JG9 3925 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms