RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 ASPMQ8IZT6 3477 aa8.33□□□□□ -1.08
NCAPD3-203ENST00000525964 KRTAP21-3Q3LHN1 58 aa8.33□□□□□ -1.08
NCAPD3-203ENST00000525964 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
NCAPD3-203ENST00000525964 TACC2O95359 2948 aa8.3□□□□□ -1.08
NCAPD3-203ENST00000525964 DMXL2Q8TDJ6 3036 aa8.29□□□□□ -1.08
NCAPD3-203ENST00000525964 KRTAP11-1Q8IUC1 163 aa8.28□□□□□ -1.08
NCAPD3-203ENST00000525964 NOTCH2NLQ7Z3S9 236 aa8.27□□□□□ -1.08
NCAPD3-203ENST00000525964 KMT2BQ9UMN6 2715 aaPredicted RBP8.27□□□□□ -1.09
NCAPD3-203ENST00000525964 DMXL1Q9Y485 3027 aa8.27□□□□□ -1.09
NCAPD3-203ENST00000525964 KALRNO60229 2985 aa8.27□□□□□ -1.09
NCAPD3-203ENST00000525964 A0A0A0MQY5 61 aa8.26□□□□□ -1.09
NCAPD3-203ENST00000525964 CFAP47Q6ZTR5 3102 aa8.25□□□□□ -1.09
NCAPD3-203ENST00000525964 SPATA8Q6RVD6 105 aa8.23□□□□□ -1.09
NCAPD3-203ENST00000525964 LRBAP50851 2863 aa8.22□□□□□ -1.09
NCAPD3-203ENST00000525964 DCHS1Q96JQ0 3298 aa8.21□□□□□ -1.1
NCAPD3-203ENST00000525964 UTP20O75691 2785 aaKnown RBP8.21□□□□□ -1.1
NCAPD3-203ENST00000525964 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
NCAPD3-203ENST00000525964 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
NCAPD3-203ENST00000525964 ATMQ13315 3056 aa8.2□□□□□ -1.1
NCAPD3-203ENST00000525964 LAMA5O15230 3695 aa8.2□□□□□ -1.1
NCAPD3-203ENST00000525964 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
NCAPD3-203ENST00000525964 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
NCAPD3-203ENST00000525964 ZZEF1O43149 2961 aa8.15□□□□□ -1.11
NCAPD3-203ENST00000525964 A8MUU9 505 aa8.13□□□□□ -1.11
NCAPD3-203ENST00000525964 SMG1Q96Q15 3661 aaKnown RBP8.13□□□□□ -1.11
NCAPD3-203ENST00000525964 COL12A1Q99715 3063 aa8.11□□□□□ -1.11
NCAPD3-203ENST00000525964 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
NCAPD3-203ENST00000525964 APCP25054 2843 aa8.1□□□□□ -1.11
NCAPD3-203ENST00000525964 ASH1LQ9NR48 2969 aaKnown RBP8.03□□□□□ -1.12
NCAPD3-203ENST00000525964 RELNP78509 3460 aa8.03□□□□□ -1.12
NCAPD3-203ENST00000525964 CELSR2Q9HCU4 2923 aa8.01□□□□□ -1.13
NCAPD3-203ENST00000525964 TENM3Q9P273 2699 aa8□□□□□ -1.13
NCAPD3-203ENST00000525964 CRYBG3Q68DQ2 2970 aa7.99□□□□□ -1.13
NCAPD3-203ENST00000525964 HRNRQ86YZ3 2850 aaPredicted RBP7.98□□□□□ -1.13
NCAPD3-203ENST00000525964 A8MU10 97 aa7.97□□□□□ -1.13
NCAPD3-203ENST00000525964 CSMD1Q96PZ7 3565 aa7.97□□□□□ -1.13
NCAPD3-203ENST00000525964 SPENQ96T58 3664 aaKnown RBP7.96□□□□□ -1.13
NCAPD3-203ENST00000525964 DCHS2Q6V1P9 2916 aa7.94□□□□□ -1.14
NCAPD3-203ENST00000525964 H3BS24 57 aa7.92□□□□□ -1.14
NCAPD3-203ENST00000525964 TNP1P09430 55 aa7.88□□□□□ -1.15
NCAPD3-203ENST00000525964 KRTAP25-1Q3LHN0 102 aa7.86□□□□□ -1.15
NCAPD3-203ENST00000525964 SVEP1Q4LDE5 3571 aa7.86□□□□□ -1.15
NCAPD3-203ENST00000525964 KRTAP1-4P0C5Y4 121 aa7.83□□□□□ -1.16
NCAPD3-203ENST00000525964 TENM1Q9UKZ4 2725 aa7.82□□□□□ -1.16
NCAPD3-203ENST00000525964 A6NN06 94 aa7.81□□□□□ -1.16
NCAPD3-203ENST00000525964 XP32Q5T750 250 aa7.8□□□□□ -1.16
NCAPD3-203ENST00000525964 ZANQ9Y493 2812 aa7.79□□□□□ -1.16
NCAPD3-203ENST00000525964 NF1P21359 2839 aa7.76□□□□□ -1.17
NCAPD3-203ENST00000525964 BSNQ9UPA5 3926 aa7.74□□□□□ -1.17
NCAPD3-203ENST00000525964 CELSR1Q9NYQ6 3014 aa7.74□□□□□ -1.17
NCAPD3-203ENST00000525964 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
NCAPD3-203ENST00000525964 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
NCAPD3-203ENST00000525964 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
NCAPD3-203ENST00000525964 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
NCAPD3-203ENST00000525964 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
NCAPD3-203ENST00000525964 A0A1B0GVY2 172 aa7.61□□□□□ -1.19
NCAPD3-203ENST00000525964 FBN2P35556 2912 aa7.59□□□□□ -1.2
NCAPD3-203ENST00000525964 MXRA5Q9NR99 2828 aa7.58□□□□□ -1.2
NCAPD3-203ENST00000525964 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
NCAPD3-203ENST00000525964 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
NCAPD3-203ENST00000525964 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
NCAPD3-203ENST00000525964 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
NCAPD3-203ENST00000525964 PKD1L1Q8TDX9 2849 aa7.54□□□□□ -1.2
NCAPD3-203ENST00000525964 PRO2289Q9P1D8 64 aa7.5□□□□□ -1.21
NCAPD3-203ENST00000525964 CUBNO60494 3623 aa7.49□□□□□ -1.21
NCAPD3-203ENST00000525964 ZFHX3Q15911 3703 aa7.43□□□□□ -1.22
NCAPD3-203ENST00000525964 CSMD2Q7Z408 3487 aa7.43□□□□□ -1.22
NCAPD3-203ENST00000525964 H0YAA0 97 aa7.42□□□□□ -1.22
NCAPD3-203ENST00000525964 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
NCAPD3-203ENST00000525964 PDZD2O15018 2839 aa7.42□□□□□ -1.22
NCAPD3-203ENST00000525964 TGP01266 2768 aa7.4□□□□□ -1.22
NCAPD3-203ENST00000525964 P0C880 135 aa7.36□□□□□ -1.23
NCAPD3-203ENST00000525964 VWFP04275 2813 aa7.35□□□□□ -1.23
NCAPD3-203ENST00000525964 SRRM2Q9UQ35 2752 aaKnown RBP7.22□□□□□ -1.25
NCAPD3-203ENST00000525964 NBPF19A0A087WUL8 3843 aa7.12□□□□□ -1.27
NCAPD3-203ENST00000525964 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
NCAPD3-203ENST00000525964 FBN1P35555 2871 aaKnown RBP7.02□□□□□ -1.29
NCAPD3-203ENST00000525964 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
NCAPD3-203ENST00000525964 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
NCAPD3-203ENST00000525964 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
NCAPD3-203ENST00000525964 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
NCAPD3-203ENST00000525964 AKAP9Q99996 3911 aa6.96□□□□□ -1.3
NCAPD3-203ENST00000525964 ANK3Q12955 4377 aaKnown RBP6.95□□□□□ -1.3
NCAPD3-203ENST00000525964 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
NCAPD3-203ENST00000525964 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
NCAPD3-203ENST00000525964 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
NCAPD3-203ENST00000525964 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
NCAPD3-203ENST00000525964 MEGF8Q7Z7M0 2845 aa6.76□□□□□ -1.33
NCAPD3-203ENST00000525964 MT1HL1P0DM35 61 aa6.76□□□□□ -1.33
NCAPD3-203ENST00000525964 KRTAP15-1Q3LI76 137 aa6.72□□□□□ -1.33
NCAPD3-203ENST00000525964 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
NCAPD3-203ENST00000525964 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
NCAPD3-203ENST00000525964 KRTAP4-5Q9BYR2 181 aa6.49□□□□□ -1.37
NCAPD3-203ENST00000525964 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
NCAPD3-203ENST00000525964 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
NCAPD3-203ENST00000525964 CSMD3Q7Z407 3707 aa6.45□□□□□ -1.38
NCAPD3-203ENST00000525964 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
NCAPD3-203ENST00000525964 HUWE1Q7Z6Z7 4374 aaKnown RBP6.39□□□□□ -1.39
NCAPD3-203ENST00000525964 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
NCAPD3-203ENST00000525964 ANK2Q01484 3957 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms