RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.15
CSDE1-208ENST00000524652 Q6ZQY7 126 aa1.65□□□□□ -2.15
CSDE1-208ENST00000524652 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
CSDE1-208ENST00000524652 H3BUT2 72 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 LST1O00453 97 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 CRYGAP11844 174 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 MOBPQ13875 183 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 FAM229BQ4G0N7 80 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 CBY1Q9Y3M2 126 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 USH2AO75445 5202 aa1.64□□□□□ -2.15
CSDE1-208ENST00000524652 IGLV8-61A0A075B6I0 122 aa1.63□□□□□ -2.15
CSDE1-208ENST00000524652 TEX49A0A1B0GTD5 131 aa1.63□□□□□ -2.15
CSDE1-208ENST00000524652 H0YGX0 51 aa1.63□□□□□ -2.15
CSDE1-208ENST00000524652 PSMB2P49721 201 aa1.63□□□□□ -2.15
CSDE1-208ENST00000524652 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.63□□□□□ -2.15
CSDE1-208ENST00000524652 MTURNQ8N3F0 131 aa1.63□□□□□ -2.15
CSDE1-208ENST00000524652 ZNF706Q9Y5V0 76 aaPredicted RBP1.63□□□□□ -2.15
CSDE1-208ENST00000524652 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
CSDE1-208ENST00000524652 KMT2DO14686 5537 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 SPRR5A0A1B0GTR4 108 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 A0A1B0GV72 72 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 A0A1B0GX51 115 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 A0A1W2PPM0 123 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 TRACP01848 142 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 VAMP3Q15836 100 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 PRR4Q16378 134 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 C9orf153Q5TBE3 101 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 IGFL1Q6UW32 110 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 LINC00304Q8N9R0 145 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 RETNLBQ9BQ08 111 aa1.62□□□□□ -2.15
CSDE1-208ENST00000524652 H3BMG7 143 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 SLC25A20O43772 301 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 COX6CP09669 75 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 SCGB1C2P0DMR2 95 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 COL5A1-AS1Q5SY13 56 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 HRCT1Q6UXD1 115 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 SSBP3-AS1Q7Z2R9 100 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 ORMDL1Q9P0S3 153 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 LAMTOR3Q9UHA4 124 aa1.61□□□□□ -2.15
CSDE1-208ENST00000524652 TRBV7-4A0A0J9YYF1 115 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 A0A1W2PNM2 257 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 C9JAW5 83 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 DNAL4O96015 105 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 FABP2P12104 132 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 ATXN8Q156A1 80 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 OCIAD2Q56VL3 154 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 PPDPFLQ8WWR9 84 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 SPCS1Q9Y6A9 102 aa1.6□□□□□ -2.15
CSDE1-208ENST00000524652 TRBV20-1A0A075B6N2 111 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 K7EP34 96 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 TMEM256-PLSCR3K7ERE1 68 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 SPINK1P00995 79 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 BAALC-AS2P0C853 105 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 ANKRD29Q8N6D5 301 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 OBSCN-AS1Q96MR7 158 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 Q96NJ1 140 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
CSDE1-208ENST00000524652 FLGP20930 4061 aaPredicted RBP1.58□□□□□ -2.16
CSDE1-208ENST00000524652 TRBV7-7A0A0K0K1E9 115 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 A0A1B0GV90 55 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 H3BT86 120 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 RPS29P62273 56 aaKnown RBP1.58□□□□□ -2.16
CSDE1-208ENST00000524652 CD164Q04900 197 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 C1orf195Q5TG92 126 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 Q5XG85 94 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 SPAG11AQ6PDA7 123 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 Q6Q795 121 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 Q6ZQT0 140 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 C14orf132Q9NPU4 83 aa1.58□□□□□ -2.16
CSDE1-208ENST00000524652 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 A0A087WSZ3 146 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 F8WEM9 126 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 CCKP06307 115 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 RBM3P98179 157 aaKnown RBP1.57□□□□□ -2.16
CSDE1-208ENST00000524652 LYRM7Q5U5X0 104 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 Q6JHZ5 121 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 TEN1Q86WV5 123 aa1.57□□□□□ -2.16
CSDE1-208ENST00000524652 LOC110117498A0A087WWA1 95 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 C9orf92A6NGG3 77 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 JMJD7-PLA2G4BH0Y9G9 81 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 H3BQ85 93 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 SNCGO76070 127 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 TPRXLQ17RH7 258 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 DEFB116Q30KQ4 102 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 ASB16-AS1Q495Z4 193 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 VPS25Q9BRG1 176 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 LIMD2Q9BT23 127 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
CSDE1-208ENST00000524652 F8W1H4 67 aa1.55□□□□□ -2.16
CSDE1-208ENST00000524652 ETDBQ3ZM63 59 aa1.55□□□□□ -2.16
CSDE1-208ENST00000524652 GTF2H5Q6ZYL4 71 aa1.55□□□□□ -2.16
CSDE1-208ENST00000524652 FP248Q71RG6 208 aaPredicted RBP1.55□□□□□ -2.16
CSDE1-208ENST00000524652 DSCR8Q96T75 97 aa1.55□□□□□ -2.16
CSDE1-208ENST00000524652 KRTAP4-1Q9BYQ7 146 aa1.55□□□□□ -2.16
CSDE1-208ENST00000524652 IGKV4-1P06312 121 aa1.53□□□□□ -2.16
CSDE1-208ENST00000524652 LINC00846Q9NV44 126 aa1.53□□□□□ -2.16
CSDE1-208ENST00000524652 SS18L2Q9UHA2 77 aa1.53□□□□□ -2.16
CSDE1-208ENST00000524652 IGKV3D-7A0A0C4DH55 119 aa1.52□□□□□ -2.17
CSDE1-208ENST00000524652 K7EQZ3 153 aa1.52□□□□□ -2.17
CSDE1-208ENST00000524652 PDE6GP18545 87 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms