RNA–Protein interactions for RNA: ENST00000524630.5

CTNND1-210, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNND1, Length 6,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-210ENST00000524630 CFAP47Q6ZTR5 3102 aa5.39□□□□□ -1.55
CTNND1-210ENST00000524630 IGSF10Q6WRI0 2623 aa5.39□□□□□ -1.55
CTNND1-210ENST00000524630 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
CTNND1-210ENST00000524630 APCP25054 2843 aa5.39□□□□□ -1.55
CTNND1-210ENST00000524630 ITPR2Q14571 2701 aa5.38□□□□□ -1.55
CTNND1-210ENST00000524630 P0C880 135 aa5.36□□□□□ -1.55
CTNND1-210ENST00000524630 MAP1AP78559 2803 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-210ENST00000524630 PP632Q6XCG6 107 aa5.34□□□□□ -1.55
CTNND1-210ENST00000524630 UTP20O75691 2785 aaKnown RBP5.34□□□□□ -1.55
CTNND1-210ENST00000524630 ATMQ13315 3056 aa5.33□□□□□ -1.56
CTNND1-210ENST00000524630 XP32Q5T750 250 aa5.33□□□□□ -1.56
CTNND1-210ENST00000524630 EYSQ5T1H1 3165 aa5.32□□□□□ -1.56
CTNND1-210ENST00000524630 TACC2O95359 2948 aa5.31□□□□□ -1.56
CTNND1-210ENST00000524630 DCHS1Q96JQ0 3298 aa5.31□□□□□ -1.56
CTNND1-210ENST00000524630 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
CTNND1-210ENST00000524630 COL6A5A8TX70 2615 aa5.3□□□□□ -1.56
CTNND1-210ENST00000524630 ITPR1Q14643 2758 aa5.3□□□□□ -1.56
CTNND1-210ENST00000524630 FLG2Q5D862 2391 aaPredicted RBP5.29□□□□□ -1.56
CTNND1-210ENST00000524630 WDFY3Q8IZQ1 3526 aa5.28□□□□□ -1.56
CTNND1-210ENST00000524630 DMXL2Q8TDJ6 3036 aa5.28□□□□□ -1.56
CTNND1-210ENST00000524630 ASPMQ8IZT6 3477 aa5.27□□□□□ -1.57
CTNND1-210ENST00000524630 HRNRQ86YZ3 2850 aaPredicted RBP5.26□□□□□ -1.57
CTNND1-210ENST00000524630 BAHCC1Q9P281 2608 aa5.26□□□□□ -1.57
CTNND1-210ENST00000524630 COL12A1Q99715 3063 aa5.25□□□□□ -1.57
CTNND1-210ENST00000524630 NOTCH1P46531 2555 aa5.25□□□□□ -1.57
CTNND1-210ENST00000524630 TNRC18O15417 2968 aaPredicted RBP5.24□□□□□ -1.57
CTNND1-210ENST00000524630 ASH1LQ9NR48 2969 aaKnown RBP5.24□□□□□ -1.57
CTNND1-210ENST00000524630 A0A1B0GVY2 172 aa5.23□□□□□ -1.57
CTNND1-210ENST00000524630 NSD1Q96L73 2696 aaPredicted RBP5.22□□□□□ -1.57
CTNND1-210ENST00000524630 LOC400499M0QZD8 3231 aa5.22□□□□□ -1.57
CTNND1-210ENST00000524630 STAB2Q8WWQ8 2551 aa5.22□□□□□ -1.57
CTNND1-210ENST00000524630 KRTAP13-3Q3SY46 172 aa5.22□□□□□ -1.57
CTNND1-210ENST00000524630 UBR5O95071 2799 aaPredicted RBP5.21□□□□□ -1.57
CTNND1-210ENST00000524630 STAB1Q9NY15 2570 aa5.21□□□□□ -1.57
CTNND1-210ENST00000524630 HIVEP1P15822 2718 aa5.19□□□□□ -1.58
CTNND1-210ENST00000524630 CSMD1Q96PZ7 3565 aa5.18□□□□□ -1.58
CTNND1-210ENST00000524630 ZFHX4Q86UP3 3567 aa5.17□□□□□ -1.58
CTNND1-210ENST00000524630 DMXL1Q9Y485 3027 aa5.16□□□□□ -1.58
CTNND1-210ENST00000524630 KRTAP12-2P59991 146 aa5.15□□□□□ -1.58
CTNND1-210ENST00000524630 TPRXLQ17RH7 258 aa5.15□□□□□ -1.58
CTNND1-210ENST00000524630 CRYBG3Q68DQ2 2970 aa5.12□□□□□ -1.59
CTNND1-210ENST00000524630 KRTAP21-3Q3LHN1 58 aa5.12□□□□□ -1.59
CTNND1-210ENST00000524630 FLNCQ14315 2725 aa5.09□□□□□ -1.6
CTNND1-210ENST00000524630 CELSR2Q9HCU4 2923 aa5.06□□□□□ -1.6
CTNND1-210ENST00000524630 LAMA5O15230 3695 aa5.06□□□□□ -1.6
CTNND1-210ENST00000524630 SMG1Q96Q15 3661 aaKnown RBP5.05□□□□□ -1.6
CTNND1-210ENST00000524630 RELNP78509 3460 aa5.05□□□□□ -1.6
CTNND1-210ENST00000524630 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
CTNND1-210ENST00000524630 ZANQ9Y493 2812 aa5.02□□□□□ -1.61
CTNND1-210ENST00000524630 FBN2P35556 2912 aa5.02□□□□□ -1.61
CTNND1-210ENST00000524630 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
CTNND1-210ENST00000524630 DCHS2Q6V1P9 2916 aa5□□□□□ -1.61
CTNND1-210ENST00000524630 NBPF19A0A087WUL8 3843 aa4.99□□□□□ -1.61
CTNND1-210ENST00000524630 CELSR1Q9NYQ6 3014 aa4.98□□□□□ -1.61
CTNND1-210ENST00000524630 DMDP11532 3685 aa4.98□□□□□ -1.61
CTNND1-210ENST00000524630 KRTAP13-4Q3LI77 160 aa4.97□□□□□ -1.61
CTNND1-210ENST00000524630 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.62
CTNND1-210ENST00000524630 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.621e-6■□□□□ 9
CTNND1-210ENST00000524630 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
CTNND1-210ENST00000524630 ANK3Q12955 4377 aaKnown RBP4.93□□□□□ -1.62
CTNND1-210ENST00000524630 TGP01266 2768 aa4.92□□□□□ -1.62
CTNND1-210ENST00000524630 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
CTNND1-210ENST00000524630 NF1P21359 2839 aa4.88□□□□□ -1.63
CTNND1-210ENST00000524630 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
CTNND1-210ENST00000524630 MXRA5Q9NR99 2828 aa4.86□□□□□ -1.63
CTNND1-210ENST00000524630 BSNQ9UPA5 3926 aa4.85□□□□□ -1.63
CTNND1-210ENST00000524630 SPENQ96T58 3664 aaKnown RBP4.84□□□□□ -1.63
CTNND1-210ENST00000524630 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
CTNND1-210ENST00000524630 TENM4Q6N022 2769 aa4.83□□□□□ -1.64
CTNND1-210ENST00000524630 TENM3Q9P273 2699 aa4.76□□□□□ -1.65
CTNND1-210ENST00000524630 HUWE1Q7Z6Z7 4374 aaKnown RBP4.74□□□□□ -1.65
CTNND1-210ENST00000524630 PDZD2O15018 2839 aa4.73□□□□□ -1.65
CTNND1-210ENST00000524630 TENM1Q9UKZ4 2725 aa4.73□□□□□ -1.65
CTNND1-210ENST00000524630 TENM2Q9NT68 2774 aa4.72□□□□□ -1.65
CTNND1-210ENST00000524630 ZFHX3Q15911 3703 aa4.71□□□□□ -1.66
CTNND1-210ENST00000524630 AKAP9Q99996 3911 aa4.71□□□□□ -1.66
CTNND1-210ENST00000524630 VPS13CQ709C8 3753 aa4.69□□□□□ -1.66
CTNND1-210ENST00000524630 INE1O15225 51 aa4.67□□□□□ -1.66
CTNND1-210ENST00000524630 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
CTNND1-210ENST00000524630 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
CTNND1-210ENST00000524630 TRRAPQ9Y4A5 3859 aa4.61□□□□□ -1.67
CTNND1-210ENST00000524630 CUBNO60494 3623 aa4.59□□□□□ -1.67
CTNND1-210ENST00000524630 ALMS1Q8TCU4 4167 aa4.59□□□□□ -1.67
CTNND1-210ENST00000524630 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
CTNND1-210ENST00000524630 MUC3AQ02505 3323 aa4.54□□□□□ -1.68
CTNND1-210ENST00000524630 MT1HL1P0DM35 61 aa4.52□□□□□ -1.69
CTNND1-210ENST00000524630 PKD1L1Q8TDX9 2849 aa4.5□□□□□ -1.69
CTNND1-210ENST00000524630 OTOGQ6ZRI0 2925 aa4.47□□□□□ -1.69
CTNND1-210ENST00000524630 FBN1P35555 2871 aaKnown RBP4.47□□□□□ -1.69
CTNND1-210ENST00000524630 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
CTNND1-210ENST00000524630 VWFP04275 2813 aa4.46□□□□□ -1.7
CTNND1-210ENST00000524630 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.7
CTNND1-210ENST00000524630 FBN3Q75N90 2809 aa4.45□□□□□ -1.7
CTNND1-210ENST00000524630 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
CTNND1-210ENST00000524630 CSMD3Q7Z407 3707 aa4.4□□□□□ -1.71
CTNND1-210ENST00000524630 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
CTNND1-210ENST00000524630 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
CTNND1-210ENST00000524630 DNAH9Q9NYC9 4486 aa4.38□□□□□ -1.71
CTNND1-210ENST00000524630 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
CTNND1-210ENST00000524630 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms