RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 SETD2Q9BYW2 2564 aaPredicted RBP3.48□□□□□ -1.85
LIN7C-202ENST00000524596 TNP1P09430 55 aa3.47□□□□□ -1.85
LIN7C-202ENST00000524596 LAMA1P25391 3075 aa3.47□□□□□ -1.85
LIN7C-202ENST00000524596 KRTAP3-3Q9BYR6 98 aa3.47□□□□□ -1.85
LIN7C-202ENST00000524596 KRTAP3-2Q9BYR7 98 aa3.47□□□□□ -1.85
LIN7C-202ENST00000524596 LOC400499M0QZD8 3231 aa3.47□□□□□ -1.85
LIN7C-202ENST00000524596 Q5VSD8 79 aa3.46□□□□□ -1.86
LIN7C-202ENST00000524596 OTOGQ6ZRI0 2925 aa3.45□□□□□ -1.86
LIN7C-202ENST00000524596 FREM2Q5SZK8 3169 aa3.45□□□□□ -1.86
LIN7C-202ENST00000524596 MGAQ8IWI9 3026 aa3.45□□□□□ -1.86
LIN7C-202ENST00000524596 BSNQ9UPA5 3926 aa3.44□□□□□ -1.86
LIN7C-202ENST00000524596 PRRC2CQ9Y520 2896 aaKnown RBP3.44□□□□□ -1.86
LIN7C-202ENST00000524596 FLNCQ14315 2725 aa3.44□□□□□ -1.86
LIN7C-202ENST00000524596 DNHD1Q96M86 4753 aa3.44□□□□□ -1.86
LIN7C-202ENST00000524596 CENPEQ02224 2701 aa3.44□□□□□ -1.86
LIN7C-202ENST00000524596 ITPR2Q14571 2701 aa3.43□□□□□ -1.86
LIN7C-202ENST00000524596 PDZD2O15018 2839 aa3.43□□□□□ -1.86
LIN7C-202ENST00000524596 NF1P21359 2839 aa3.43□□□□□ -1.86
LIN7C-202ENST00000524596 KRTAP10-9P60411 292 aa3.42□□□□□ -1.86
LIN7C-202ENST00000524596 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
LIN7C-202ENST00000524596 ITPR3Q14573 2671 aa3.41□□□□□ -1.86
LIN7C-202ENST00000524596 HIVEP1P15822 2718 aa3.4□□□□□ -1.86
LIN7C-202ENST00000524596 ATRQ13535 2644 aa3.4□□□□□ -1.86
LIN7C-202ENST00000524596 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.87
LIN7C-202ENST00000524596 LAMA5O15230 3695 aa3.4□□□□□ -1.87
LIN7C-202ENST00000524596 ATMQ13315 3056 aa3.4□□□□□ -1.87
LIN7C-202ENST00000524596 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
LIN7C-202ENST00000524596 WDFY3Q8IZQ1 3526 aa3.39□□□□□ -1.87
LIN7C-202ENST00000524596 CELSR3Q9NYQ7 3312 aa3.38□□□□□ -1.87
LIN7C-202ENST00000524596 AKAP9Q99996 3911 aa3.38□□□□□ -1.87
LIN7C-202ENST00000524596 LRBAP50851 2863 aa3.37□□□□□ -1.87
LIN7C-202ENST00000524596 APCP25054 2843 aa3.36□□□□□ -1.87
LIN7C-202ENST00000524596 KRTAP13-1Q8IUC0 172 aa3.36□□□□□ -1.87
LIN7C-202ENST00000524596 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
LIN7C-202ENST00000524596 SMR3AQ99954 134 aa3.36□□□□□ -1.87
LIN7C-202ENST00000524596 CELSR2Q9HCU4 2923 aa3.35□□□□□ -1.87
LIN7C-202ENST00000524596 RELNP78509 3460 aa3.35□□□□□ -1.87
LIN7C-202ENST00000524596 UTP20O75691 2785 aaKnown RBP3.34□□□□□ -1.87
LIN7C-202ENST00000524596 BOD1L1Q8NFC6 3051 aa3.31□□□□□ -1.88
LIN7C-202ENST00000524596 COL12A1Q99715 3063 aa3.31□□□□□ -1.88
LIN7C-202ENST00000524596 KRTAP13-2Q52LG2 175 aa3.3□□□□□ -1.88
LIN7C-202ENST00000524596 COL6A5A8TX70 2615 aa3.3□□□□□ -1.88
LIN7C-202ENST00000524596 FBN1P35555 2871 aaKnown RBP3.29□□□□□ -1.88
LIN7C-202ENST00000524596 KRTAP1-3Q8IUG1 177 aa3.29□□□□□ -1.88
LIN7C-202ENST00000524596 SRRM2Q9UQ35 2752 aaKnown RBP3.29□□□□□ -1.88
LIN7C-202ENST00000524596 STAB2Q8WWQ8 2551 aa3.28□□□□□ -1.88
LIN7C-202ENST00000524596 MGAM2Q2M2H8 2515 aa3.28□□□□□ -1.88
LIN7C-202ENST00000524596 LCE2DQ5TA82 110 aaPredicted RBP3.28□□□□□ -1.88
LIN7C-202ENST00000524596 ADGRG4Q8IZF6 3080 aa3.27□□□□□ -1.89
LIN7C-202ENST00000524596 FLNAP21333 2647 aaKnown RBP3.26□□□□□ -1.89
LIN7C-202ENST00000524596 KRTAP3-1Q9BYR8 98 aa3.26□□□□□ -1.89
LIN7C-202ENST00000524596 SPENQ96T58 3664 aaKnown RBP3.26□□□□□ -1.89
LIN7C-202ENST00000524596 ANK2Q01484 3957 aa3.26□□□□□ -1.89
LIN7C-202ENST00000524596 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
LIN7C-202ENST00000524596 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
LIN7C-202ENST00000524596 STAB1Q9NY15 2570 aa3.24□□□□□ -1.89
LIN7C-202ENST00000524596 NSD1Q96L73 2696 aaPredicted RBP3.24□□□□□ -1.89
LIN7C-202ENST00000524596 DNAH3Q8TD57 4116 aa3.24□□□□□ -1.89
LIN7C-202ENST00000524596 CELSR1Q9NYQ6 3014 aa3.24□□□□□ -1.89
LIN7C-202ENST00000524596 CRYBG3Q68DQ2 2970 aa3.24□□□□□ -1.89
LIN7C-202ENST00000524596 KRTAP1-1Q07627 177 aa3.23□□□□□ -1.89
LIN7C-202ENST00000524596 NIPBLQ6KC79 2804 aaeCLIP3.21□□□□□ -1.9
LIN7C-202ENST00000524596 CSMD1Q96PZ7 3565 aa3.2□□□□□ -1.9
LIN7C-202ENST00000524596 NBEAL1Q6ZS30 2694 aa3.2□□□□□ -1.9
LIN7C-202ENST00000524596 NOTCH1P46531 2555 aa3.19□□□□□ -1.9
LIN7C-202ENST00000524596 MAP1AP78559 2803 aaPredicted RBP3.18□□□□□ -1.9
LIN7C-202ENST00000524596 KRTAP17-1Q9BYP8 105 aa3.15□□□□□ -1.91
LIN7C-202ENST00000524596 ANK3Q12955 4377 aaKnown RBP3.14□□□□□ -1.91
LIN7C-202ENST00000524596 MXRA5Q9NR99 2828 aa3.14□□□□□ -1.91
LIN7C-202ENST00000524596 TACC2O95359 2948 aa3.13□□□□□ -1.91
LIN7C-202ENST00000524596 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
LIN7C-202ENST00000524596 BIRC6Q9NR09 4857 aa3.12□□□□□ -1.91
LIN7C-202ENST00000524596 ZNF469Q96JG9 3925 aaPredicted RBP3.12□□□□□ -1.91
LIN7C-202ENST00000524596 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
LIN7C-202ENST00000524596 DCHS2Q6V1P9 2916 aa3.11□□□□□ -1.91
LIN7C-202ENST00000524596 M0R2T5 61 aa3.11□□□□□ -1.91
LIN7C-202ENST00000524596 TGP01266 2768 aa3.1□□□□□ -1.91
LIN7C-202ENST00000524596 KRTAP1-5Q9BYS1 174 aa3.1□□□□□ -1.91
LIN7C-202ENST00000524596 HRNRQ86YZ3 2850 aaPredicted RBP3.08□□□□□ -1.92
LIN7C-202ENST00000524596 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
LIN7C-202ENST00000524596 ZANQ9Y493 2812 aa3.04□□□□□ -1.92
LIN7C-202ENST00000524596 LCE2CQ5TA81 110 aa3.04□□□□□ -1.92
LIN7C-202ENST00000524596 NBEAL2Q6ZNJ1 2754 aa3.04□□□□□ -1.92
LIN7C-202ENST00000524596 LCE2BO14633 110 aa3.04□□□□□ -1.92
LIN7C-202ENST00000524596 RYR3Q15413 4870 aa3.03□□□□□ -1.92
LIN7C-202ENST00000524596 KRTAP10-3P60369 221 aa3.03□□□□□ -1.92
LIN7C-202ENST00000524596 PKD1L1Q8TDX9 2849 aa3.01□□□□□ -1.93
LIN7C-202ENST00000524596 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
LIN7C-202ENST00000524596 PRKDCP78527 4128 aaKnown RBP3□□□□□ -1.93
LIN7C-202ENST00000524596 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
LIN7C-202ENST00000524596 KMT2CQ8NEZ4 4911 aaKnown RBP3□□□□□ -1.93
LIN7C-202ENST00000524596 CUBNO60494 3623 aa2.99□□□□□ -1.93
LIN7C-202ENST00000524596 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
LIN7C-202ENST00000524596 TRRAPQ9Y4A5 3859 aa2.97□□□□□ -1.93
LIN7C-202ENST00000524596 KRTAP10-11P60412 298 aa2.96□□□□□ -1.93
LIN7C-202ENST00000524596 DNAH1Q9P2D7 4330 aa2.95□□□□□ -1.94
LIN7C-202ENST00000524596 CMYA5Q8N3K9 4069 aa2.95□□□□□ -1.94
LIN7C-202ENST00000524596 RYR2Q92736 4967 aa2.95□□□□□ -1.94
LIN7C-202ENST00000524596 HERC2O95714 4834 aa2.94□□□□□ -1.94
LIN7C-202ENST00000524596 EPPK1P58107 5090 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms