RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 CCDC179H3BU77 68 aa15.48■□□□□ 0.07
TRNP1-201ENST00000522111 IGHV6-1A0A0B4J1U7 121 aa15.47■□□□□ 0.07
TRNP1-201ENST00000522111 A0A1B0GVX0 72 aa15.44■□□□□ 0.06
TRNP1-201ENST00000522111 WFDC13Q8IUB5 93 aa15.44■□□□□ 0.06
TRNP1-201ENST00000522111 HCG22E2RYF7 251 aa15.43■□□□□ 0.06
TRNP1-201ENST00000522111 HERC2O95714 4834 aa15.41■□□□□ 0.06
TRNP1-201ENST00000522111 ATOX1O00244 68 aa15.4■□□□□ 0.06
TRNP1-201ENST00000522111 ABCA13Q86UQ4 5058 aa15.4■□□□□ 0.06
TRNP1-201ENST00000522111 MT1HL1P0DM35 61 aa15.4■□□□□ 0.06
TRNP1-201ENST00000522111 RETNLBQ9BQ08 111 aa15.38■□□□□ 0.05
TRNP1-201ENST00000522111 MMP24-AS1A0A0U1RRL7 71 aa15.36■□□□□ 0.05
TRNP1-201ENST00000522111 NOTCH2NLQ7Z3S9 236 aa15.36■□□□□ 0.05
TRNP1-201ENST00000522111 C8orf17Q9NRJ1 99 aa15.35■□□□□ 0.05
TRNP1-201ENST00000522111 DMBT1Q9UGM3 2413 aaPredicted RBP15.34■□□□□ 0.05
TRNP1-201ENST00000522111 CASC2Q6XLA1 102 aa15.34■□□□□ 0.05
TRNP1-201ENST00000522111 UQCRQO14949 82 aa15.33■□□□□ 0.04
TRNP1-201ENST00000522111 KRTAP29-1A8MX34 341 aaPredicted RBP15.29■□□□□ 0.04
TRNP1-201ENST00000522111 COX7CP15954 63 aa15.29■□□□□ 0.04
TRNP1-201ENST00000522111 hDV103S1A0JD37 113 aa15.29■□□□□ 0.04
TRNP1-201ENST00000522111 OXTP01178 125 aa15.29■□□□□ 0.04
TRNP1-201ENST00000522111 SERP2Q8N6R1 65 aa15.22■□□□□ 0.03
TRNP1-201ENST00000522111 LINC00313P59037 77 aa15.21■□□□□ 0.03
TRNP1-201ENST00000522111 C8orf87E5RJ46 101 aa15.19■□□□□ 0.02
TRNP1-201ENST00000522111 OCR1Q9BZK8 76 aa15.18■□□□□ 0.02
TRNP1-201ENST00000522111 SMIM20Q8N5G0 67 aa15.15■□□□□ 0.02
TRNP1-201ENST00000522111 MRPL34Q9BQ48 92 aaKnown RBP15.15■□□□□ 0.02
TRNP1-201ENST00000522111 TRAV7A0A075B6U4 112 aa15.14■□□□□ 0.01
TRNP1-201ENST00000522111 TMEM254Q8TBM7 123 aa15.13■□□□□ 0.01
TRNP1-201ENST00000522111 NDUFS5O43920 106 aa15.13■□□□□ 0.01
TRNP1-201ENST00000522111 C9orf92A6NGG3 77 aa15.1■□□□□ 0.01
TRNP1-201ENST00000522111 KRTAP16-1A8MUX0 517 aa15.05■□□□□ 0
TRNP1-201ENST00000522111 J3QL48 77 aa15.05■□□□□ 0
TRNP1-201ENST00000522111 FP248Q71RG6 208 aaPredicted RBP14.98□□□□□ -0.01
TRNP1-201ENST00000522111 C20orf197Q8N268 126 aa14.97□□□□□ -0.01
TRNP1-201ENST00000522111 IGLV7-46A0A075B6I9 117 aa14.96□□□□□ -0.01
TRNP1-201ENST00000522111 PRR4Q16378 134 aa14.94□□□□□ -0.02
TRNP1-201ENST00000522111 Q8N9P0 234 aaPredicted RBP14.94□□□□□ -0.02
TRNP1-201ENST00000522111 TP53AIP1Q9HCN2 124 aa14.94□□□□□ -0.02
TRNP1-201ENST00000522111 PCLOQ9Y6V0 5065 aa14.94□□□□□ -0.02
TRNP1-201ENST00000522111 CYSTM1Q9H1C7 97 aa14.92□□□□□ -0.02
TRNP1-201ENST00000522111 SNURFQ9Y675 71 aa14.91□□□□□ -0.02
TRNP1-201ENST00000522111 H0Y9P7 68 aa14.87□□□□□ -0.03
TRNP1-201ENST00000522111 C5orf47Q569G3 176 aa14.87□□□□□ -0.03
TRNP1-201ENST00000522111 TRAV22A0A0B4J277 110 aa14.87□□□□□ -0.03
TRNP1-201ENST00000522111 TMEM258P61165 79 aa14.85□□□□□ -0.03
TRNP1-201ENST00000522111 Q5W150 140 aa14.85□□□□□ -0.03
TRNP1-201ENST00000522111 MP68P56378 58 aa14.83□□□□□ -0.04
TRNP1-201ENST00000522111 KRTAP13-3Q3SY46 172 aa14.81□□□□□ -0.04
TRNP1-201ENST00000522111 LINC00208Q96KT6 92 aa14.8□□□□□ -0.04
TRNP1-201ENST00000522111 A0A0U1RQV1 116 aa14.79□□□□□ -0.04
TRNP1-201ENST00000522111 KLKP1Q107X0 134 aa14.78□□□□□ -0.04
TRNP1-201ENST00000522111 C20orf166-AS1Q96NR2 134 aa14.77□□□□□ -0.04
TRNP1-201ENST00000522111 A8MUU9 505 aa14.75□□□□□ -0.05
TRNP1-201ENST00000522111 C1orf64Q8NEQ6 169 aa14.73□□□□□ -0.05
TRNP1-201ENST00000522111 RPS28P62857 69 aaKnown RBP14.71□□□□□ -0.05
TRNP1-201ENST00000522111 LPAP08519 4548 aa14.7□□□□□ -0.06
TRNP1-201ENST00000522111 XP32Q5T750 250 aa14.7□□□□□ -0.06
TRNP1-201ENST00000522111 ZCCHC13Q8WW36 166 aaKnown RBP14.68□□□□□ -0.06
TRNP1-201ENST00000522111 H7BZZ5 65 aa14.67□□□□□ -0.06
TRNP1-201ENST00000522111 TPRXLQ17RH7 258 aa14.65□□□□□ -0.06
TRNP1-201ENST00000522111 Q75L30 129 aa14.65□□□□□ -0.06
TRNP1-201ENST00000522111 H3BPC8 53 aa14.65□□□□□ -0.06
TRNP1-201ENST00000522111 NDUFC1O43677 76 aa14.64□□□□□ -0.07
TRNP1-201ENST00000522111 HERC1Q15751 4861 aa14.6□□□□□ -0.07
TRNP1-201ENST00000522111 RPL37P61927 97 aaKnown RBP14.56□□□□□ -0.08
TRNP1-201ENST00000522111 FAM236DA0A1B0GTK5 79 aa14.56□□□□□ -0.08
TRNP1-201ENST00000522111 LOC101927531A0A1B0GV80 90 aa14.56□□□□□ -0.08
TRNP1-201ENST00000522111 FAM236CP0DP71 79 aa14.56□□□□□ -0.08
TRNP1-201ENST00000522111 LRP2P98164 4655 aa14.55□□□□□ -0.08
TRNP1-201ENST00000522111 IGKV2D-30A0A075B6S6 120 aa14.54□□□□□ -0.08
TRNP1-201ENST00000522111 IGKV2-30P06310 120 aa14.54□□□□□ -0.08
TRNP1-201ENST00000522111 PCOTHQ58A44 107 aa14.54□□□□□ -0.08
TRNP1-201ENST00000522111 ATP11AUNQ6ZP68 121 aa14.51□□□□□ -0.09
TRNP1-201ENST00000522111 CYP4F30PQ9H0H9 118 aa14.5□□□□□ -0.09
TRNP1-201ENST00000522111 ATP5EP56381 51 aaPredicted RBP14.43□□□□□ -0.1
TRNP1-201ENST00000522111 SERP1Q9Y6X1 66 aa14.41□□□□□ -0.1
TRNP1-201ENST00000522111 C7orf65Q6ZTY9 151 aa14.39□□□□□ -0.11
TRNP1-201ENST00000522111 SPINK7P58062 85 aa14.33□□□□□ -0.12
TRNP1-201ENST00000522111 HMCN2Q8NDA2 5059 aa14.31□□□□□ -0.12
TRNP1-201ENST00000522111 HRES1P13985 223 aa14.29□□□□□ -0.12
TRNP1-201ENST00000522111 SPANXA2-OT1Q8N9U9 137 aa14.24□□□□□ -0.13
TRNP1-201ENST00000522111 C4orf26Q17RF5 130 aa14.16□□□□□ -0.14
TRNP1-201ENST00000522111 SEC61BP60468 96 aaKnown RBP14.14□□□□□ -0.15
TRNP1-201ENST00000522111 SMIM26A0A096LP01 95 aa14.13□□□□□ -0.15
TRNP1-201ENST00000522111 DMAC1Q96GE9 116 aa14.02□□□□□ -0.17
TRNP1-201ENST00000522111 SVIPQ8NHG7 77 aa14□□□□□ -0.17
TRNP1-201ENST00000522111 MUC17Q685J3 4493 aa13.98□□□□□ -0.17
TRNP1-201ENST00000522111 KRTAP4-1Q9BYQ7 146 aa13.94□□□□□ -0.18
TRNP1-201ENST00000522111 KRTAP3-1Q9BYR8 98 aa13.92□□□□□ -0.18
TRNP1-201ENST00000522111 ACYP2P14621 99 aa13.91□□□□□ -0.18
TRNP1-201ENST00000522111 COA5Q86WW8 74 aa13.91□□□□□ -0.18
TRNP1-201ENST00000522111 COX6B2Q6YFQ2 88 aa13.91□□□□□ -0.18
TRNP1-201ENST00000522111 MUC2Q02817 5179 aa13.89□□□□□ -0.19
TRNP1-201ENST00000522111 A8MUN3 132 aa13.83□□□□□ -0.19
TRNP1-201ENST00000522111 MPLKIPQ8TAP9 179 aa13.8□□□□□ -0.2
TRNP1-201ENST00000522111 UBR4Q5T4S7 5183 aa13.79□□□□□ -0.2
TRNP1-201ENST00000522111 RBM12B-AS1Q9P1G2 102 aa13.76□□□□□ -0.21
TRNP1-201ENST00000522111 CHKB-CPT1BH3BT56 60 aa13.75□□□□□ -0.21
TRNP1-201ENST00000522111 Q1T7F1 81 aa13.71□□□□□ -0.22
TRNP1-201ENST00000522111 H1FX-AS1Q4G0G2 97 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms