RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 ADGRG4Q8IZF6 3080 aa6.25□□□□□ -1.41
LAMA4-219ENST00000522006 COL6A3P12111 3177 aa6.25□□□□□ -1.41
LAMA4-219ENST00000522006 DMXL2Q8TDJ6 3036 aa6.25□□□□□ -1.41
LAMA4-219ENST00000522006 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
LAMA4-219ENST00000522006 NBEAQ8NFP9 2946 aa6.22□□□□□ -1.41
LAMA4-219ENST00000522006 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
LAMA4-219ENST00000522006 LRBAP50851 2863 aa6.21□□□□□ -1.41
LAMA4-219ENST00000522006 NSD1Q96L73 2696 aaPredicted RBP6.21□□□□□ -1.42
LAMA4-219ENST00000522006 UTP20O75691 2785 aaKnown RBP6.17□□□□□ -1.42
LAMA4-219ENST00000522006 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
LAMA4-219ENST00000522006 REV3LO60673 3130 aa6.15□□□□□ -1.42
LAMA4-219ENST00000522006 SPTBN5Q9NRC6 3674 aaKnown RBP6.14□□□□□ -1.43
LAMA4-219ENST00000522006 TNRC18O15417 2968 aaPredicted RBP6.14□□□□□ -1.43
LAMA4-219ENST00000522006 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
LAMA4-219ENST00000522006 EYSQ5T1H1 3165 aa6.11□□□□□ -1.43
LAMA4-219ENST00000522006 ZZEF1O43149 2961 aa6.1□□□□□ -1.43
LAMA4-219ENST00000522006 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
LAMA4-219ENST00000522006 CFAP47Q6ZTR5 3102 aa6.1□□□□□ -1.43
LAMA4-219ENST00000522006 ASH1LQ9NR48 2969 aaKnown RBP6.08□□□□□ -1.44
LAMA4-219ENST00000522006 SPEGQ15772 3267 aa6.07□□□□□ -1.44
LAMA4-219ENST00000522006 KRTAP10-8P60410 259 aa6.07□□□□□ -1.44
LAMA4-219ENST00000522006 APCP25054 2843 aa6.07□□□□□ -1.44
LAMA4-219ENST00000522006 H0YAA0 97 aa6.06□□□□□ -1.44
LAMA4-219ENST00000522006 DMXL1Q9Y485 3027 aa6.06□□□□□ -1.44
LAMA4-219ENST00000522006 A0A1B0GVY2 172 aa6.05□□□□□ -1.44
LAMA4-219ENST00000522006 XP32Q5T750 250 aa6.05□□□□□ -1.44
LAMA4-219ENST00000522006 USP34Q70CQ2 3546 aa6.05□□□□□ -1.44
LAMA4-219ENST00000522006 KMT2BQ9UMN6 2715 aaPredicted RBP6.04□□□□□ -1.44
LAMA4-219ENST00000522006 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
LAMA4-219ENST00000522006 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
LAMA4-219ENST00000522006 CELSR2Q9HCU4 2923 aa6□□□□□ -1.45
LAMA4-219ENST00000522006 P0C880 135 aa5.99□□□□□ -1.45
LAMA4-219ENST00000522006 KRTAP21-3Q3LHN1 58 aa5.99□□□□□ -1.45
LAMA4-219ENST00000522006 ZANQ9Y493 2812 aa5.99□□□□□ -1.45
LAMA4-219ENST00000522006 TENM4Q6N022 2769 aa5.99□□□□□ -1.45
LAMA4-219ENST00000522006 NIPBLQ6KC79 2804 aaeCLIP5.99□□□□□ -1.45
LAMA4-219ENST00000522006 LOC400499M0QZD8 3231 aa5.95□□□□□ -1.46
LAMA4-219ENST00000522006 DCHS2Q6V1P9 2916 aa5.94□□□□□ -1.46
LAMA4-219ENST00000522006 HRNRQ86YZ3 2850 aaPredicted RBP5.91□□□□□ -1.46
LAMA4-219ENST00000522006 TPRXLQ17RH7 258 aa5.88□□□□□ -1.47
LAMA4-219ENST00000522006 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
LAMA4-219ENST00000522006 MYO15AQ9UKN7 3530 aa5.86□□□□□ -1.47
LAMA4-219ENST00000522006 FBN2P35556 2912 aa5.84□□□□□ -1.48
LAMA4-219ENST00000522006 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
LAMA4-219ENST00000522006 NF1P21359 2839 aa5.81□□□□□ -1.48
LAMA4-219ENST00000522006 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
LAMA4-219ENST00000522006 RELNP78509 3460 aa5.72□□□□□ -1.49
LAMA4-219ENST00000522006 KRTAP12-2P59991 146 aa5.71□□□□□ -1.49
LAMA4-219ENST00000522006 MXRA5Q9NR99 2828 aa5.67□□□□□ -1.5
LAMA4-219ENST00000522006 CELSR1Q9NYQ6 3014 aa5.66□□□□□ -1.5
LAMA4-219ENST00000522006 DCHS1Q96JQ0 3298 aa5.65□□□□□ -1.5
LAMA4-219ENST00000522006 WDFY3Q8IZQ1 3526 aa5.65□□□□□ -1.51
LAMA4-219ENST00000522006 TENM1Q9UKZ4 2725 aa5.64□□□□□ -1.51
LAMA4-219ENST00000522006 TENM3Q9P273 2699 aa5.62□□□□□ -1.51
LAMA4-219ENST00000522006 TENM2Q9NT68 2774 aa5.6□□□□□ -1.51
LAMA4-219ENST00000522006 LAMA5O15230 3695 aa5.6□□□□□ -1.51
LAMA4-219ENST00000522006 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
LAMA4-219ENST00000522006 ASPMQ8IZT6 3477 aa5.59□□□□□ -1.52
LAMA4-219ENST00000522006 KRTAP12-1P59990 96 aa5.55□□□□□ -1.52
LAMA4-219ENST00000522006 ZFHX4Q86UP3 3567 aa5.55□□□□□ -1.52
LAMA4-219ENST00000522006 PKD1L1Q8TDX9 2849 aa5.52□□□□□ -1.53
LAMA4-219ENST00000522006 PDZD2O15018 2839 aa5.51□□□□□ -1.53
LAMA4-219ENST00000522006 DMDP11532 3685 aa5.49□□□□□ -1.53
LAMA4-219ENST00000522006 NBPF19A0A087WUL8 3843 aa5.47□□□□□ -1.53
LAMA4-219ENST00000522006 MUC3AQ02505 3323 aa5.46□□□□□ -1.53
LAMA4-219ENST00000522006 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
LAMA4-219ENST00000522006 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
LAMA4-219ENST00000522006 VWFP04275 2813 aa5.42□□□□□ -1.54
LAMA4-219ENST00000522006 TGP01266 2768 aa5.41□□□□□ -1.54
LAMA4-219ENST00000522006 FBN1P35555 2871 aaKnown RBP5.4□□□□□ -1.55
LAMA4-219ENST00000522006 OTOGQ6ZRI0 2925 aa5.4□□□□□ -1.55
LAMA4-219ENST00000522006 CSMD1Q96PZ7 3565 aa5.39□□□□□ -1.55
LAMA4-219ENST00000522006 SMG1Q96Q15 3661 aaKnown RBP5.36□□□□□ -1.55
LAMA4-219ENST00000522006 ZFHX3Q15911 3703 aa5.35□□□□□ -1.55
LAMA4-219ENST00000522006 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
LAMA4-219ENST00000522006 SVEP1Q4LDE5 3571 aa5.26□□□□□ -1.57
LAMA4-219ENST00000522006 ANK3Q12955 4377 aaKnown RBP5.25□□□□□ -1.57
LAMA4-219ENST00000522006 CSMD2Q7Z408 3487 aa5.24□□□□□ -1.57
LAMA4-219ENST00000522006 INE1O15225 51 aa5.24□□□□□ -1.57
LAMA4-219ENST00000522006 SPENQ96T58 3664 aaKnown RBP5.19□□□□□ -1.58
LAMA4-219ENST00000522006 SRRM2Q9UQ35 2752 aaKnown RBP5.16□□□□□ -1.58
LAMA4-219ENST00000522006 CUBNO60494 3623 aa5.15□□□□□ -1.58
LAMA4-219ENST00000522006 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
LAMA4-219ENST00000522006 TRRAPQ9Y4A5 3859 aa5.13□□□□□ -1.59
LAMA4-219ENST00000522006 FBN3Q75N90 2809 aa5.13□□□□□ -1.59
LAMA4-219ENST00000522006 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
LAMA4-219ENST00000522006 KRTAP3-2Q9BYR7 98 aa5.1□□□□□ -1.59
LAMA4-219ENST00000522006 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
LAMA4-219ENST00000522006 BSNQ9UPA5 3926 aa5.08□□□□□ -1.6
LAMA4-219ENST00000522006 MEGF8Q7Z7M0 2845 aa5.03□□□□□ -1.6
LAMA4-219ENST00000522006 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
LAMA4-219ENST00000522006 COL7A1Q02388 2944 aa5□□□□□ -1.61
LAMA4-219ENST00000522006 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
LAMA4-219ENST00000522006 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
LAMA4-219ENST00000522006 HUWE1Q7Z6Z7 4374 aaKnown RBP4.92□□□□□ -1.62
LAMA4-219ENST00000522006 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
LAMA4-219ENST00000522006 VPS13CQ709C8 3753 aa4.88□□□□□ -1.63
LAMA4-219ENST00000522006 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
LAMA4-219ENST00000522006 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
LAMA4-219ENST00000522006 ALMS1Q8TCU4 4167 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms