RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
ERGIC1-208ENST00000520399 WDFY3Q8IZQ1 3526 aa6.63□□□□□ -1.35
ERGIC1-208ENST00000520399 H0YAA0 97 aa6.63□□□□□ -1.35
ERGIC1-208ENST00000520399 COL12A1Q99715 3063 aa6.61□□□□□ -1.35
ERGIC1-208ENST00000520399 TEP1Q99973 2627 aaKnown RBP6.61□□□□□ -1.35
ERGIC1-208ENST00000520399 DMBT1Q9UGM3 2413 aaPredicted RBP6.6□□□□□ -1.35
ERGIC1-208ENST00000520399 ASPMQ8IZT6 3477 aa6.59□□□□□ -1.35
ERGIC1-208ENST00000520399 ADGRG4Q8IZF6 3080 aa6.59□□□□□ -1.35
ERGIC1-208ENST00000520399 FLNCQ14315 2725 aa6.57□□□□□ -1.36
ERGIC1-208ENST00000520399 LAMA5O15230 3695 aa6.57□□□□□ -1.36
ERGIC1-208ENST00000520399 BAHCC1Q9P281 2608 aa6.56□□□□□ -1.36
ERGIC1-208ENST00000520399 ZZEF1O43149 2961 aa6.55□□□□□ -1.36
ERGIC1-208ENST00000520399 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
ERGIC1-208ENST00000520399 UNC79Q9P2D8 2635 aa6.53□□□□□ -1.36
ERGIC1-208ENST00000520399 KALRNO60229 2985 aa6.52□□□□□ -1.36
ERGIC1-208ENST00000520399 CFAP47Q6ZTR5 3102 aa6.5□□□□□ -1.37
ERGIC1-208ENST00000520399 LRBAP50851 2863 aa6.5□□□□□ -1.37
ERGIC1-208ENST00000520399 NBEAQ8NFP9 2946 aa6.49□□□□□ -1.37
ERGIC1-208ENST00000520399 DCHS1Q96JQ0 3298 aa6.48□□□□□ -1.37
ERGIC1-208ENST00000520399 GCN1Q92616 2671 aaKnown RBP6.47□□□□□ -1.37
ERGIC1-208ENST00000520399 RELNP78509 3460 aa6.46□□□□□ -1.37
ERGIC1-208ENST00000520399 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
ERGIC1-208ENST00000520399 TEX15Q9BXT5 2789 aa6.45□□□□□ -1.38
ERGIC1-208ENST00000520399 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
ERGIC1-208ENST00000520399 TACC2O95359 2948 aa6.42□□□□□ -1.38
ERGIC1-208ENST00000520399 SETXQ7Z333 2677 aaKnown RBP6.42□□□□□ -1.38
ERGIC1-208ENST00000520399 KMT2BQ9UMN6 2715 aaPredicted RBP6.41□□□□□ -1.38
ERGIC1-208ENST00000520399 SPENQ96T58 3664 aaKnown RBP6.41□□□□□ -1.38
ERGIC1-208ENST00000520399 XP32Q5T750 250 aa6.39□□□□□ -1.39
ERGIC1-208ENST00000520399 UTP20O75691 2785 aaKnown RBP6.38□□□□□ -1.39
ERGIC1-208ENST00000520399 ZFHX4Q86UP3 3567 aa6.38□□□□□ -1.39
ERGIC1-208ENST00000520399 ITPR1Q14643 2758 aa6.38□□□□□ -1.39
ERGIC1-208ENST00000520399 NBEAL1Q6ZS30 2694 aa6.37□□□□□ -1.39
ERGIC1-208ENST00000520399 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
ERGIC1-208ENST00000520399 COL6A5A8TX70 2615 aa6.36□□□□□ -1.39
ERGIC1-208ENST00000520399 ITPR2Q14571 2701 aa6.36□□□□□ -1.39
ERGIC1-208ENST00000520399 STAB1Q9NY15 2570 aa6.35□□□□□ -1.39
ERGIC1-208ENST00000520399 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
ERGIC1-208ENST00000520399 CRYBG3Q68DQ2 2970 aa6.33□□□□□ -1.4
ERGIC1-208ENST00000520399 APCP25054 2843 aa6.3□□□□□ -1.4
ERGIC1-208ENST00000520399 BSNQ9UPA5 3926 aa6.29□□□□□ -1.4
ERGIC1-208ENST00000520399 UBR5O95071 2799 aaPredicted RBP6.28□□□□□ -1.4
ERGIC1-208ENST00000520399 NOTCH1P46531 2555 aa6.27□□□□□ -1.41
ERGIC1-208ENST00000520399 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
ERGIC1-208ENST00000520399 SMG1Q96Q15 3661 aaKnown RBP6.27□□□□□ -1.41
ERGIC1-208ENST00000520399 CELSR2Q9HCU4 2923 aa6.26□□□□□ -1.41
ERGIC1-208ENST00000520399 HIVEP1P15822 2718 aa6.25□□□□□ -1.41
ERGIC1-208ENST00000520399 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
ERGIC1-208ENST00000520399 HRNRQ86YZ3 2850 aaPredicted RBP6.25□□□□□ -1.41
ERGIC1-208ENST00000520399 ZANQ9Y493 2812 aa6.23□□□□□ -1.41
ERGIC1-208ENST00000520399 NSD1Q96L73 2696 aaPredicted RBP6.22□□□□□ -1.41
ERGIC1-208ENST00000520399 INE1O15225 51 aa6.2□□□□□ -1.42
ERGIC1-208ENST00000520399 DCHS2Q6V1P9 2916 aa6.19□□□□□ -1.42
ERGIC1-208ENST00000520399 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
ERGIC1-208ENST00000520399 STAB2Q8WWQ8 2551 aa6.17□□□□□ -1.42
ERGIC1-208ENST00000520399 NBPF19A0A087WUL8 3843 aa6.13□□□□□ -1.43
ERGIC1-208ENST00000520399 FBN2P35556 2912 aa6.1□□□□□ -1.43
ERGIC1-208ENST00000520399 TENM4Q6N022 2769 aa6.1□□□□□ -1.43
ERGIC1-208ENST00000520399 KRTAP12-2P59991 146 aa6.09□□□□□ -1.44
ERGIC1-208ENST00000520399 ASH1LQ9NR48 2969 aaKnown RBP6.08□□□□□ -1.44
ERGIC1-208ENST00000520399 NIPBLQ6KC79 2804 aaeCLIP6.08□□□□□ -1.44
ERGIC1-208ENST00000520399 CSMD1Q96PZ7 3565 aa6.03□□□□□ -1.44
ERGIC1-208ENST00000520399 NF1P21359 2839 aa6.02□□□□□ -1.45
ERGIC1-208ENST00000520399 SVEP1Q4LDE5 3571 aa6□□□□□ -1.45
ERGIC1-208ENST00000520399 KRTAP13-4Q3LI77 160 aa5.97□□□□□ -1.45
ERGIC1-208ENST00000520399 ZFHX3Q15911 3703 aa5.96□□□□□ -1.45
ERGIC1-208ENST00000520399 CSMD2Q7Z408 3487 aa5.96□□□□□ -1.46
ERGIC1-208ENST00000520399 MXRA5Q9NR99 2828 aa5.93□□□□□ -1.46
ERGIC1-208ENST00000520399 PDZD2O15018 2839 aa5.93□□□□□ -1.46
ERGIC1-208ENST00000520399 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
ERGIC1-208ENST00000520399 CELSR1Q9NYQ6 3014 aa5.91□□□□□ -1.46
ERGIC1-208ENST00000520399 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
ERGIC1-208ENST00000520399 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
ERGIC1-208ENST00000520399 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
ERGIC1-208ENST00000520399 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
ERGIC1-208ENST00000520399 ANK3Q12955 4377 aaKnown RBP5.78□□□□□ -1.48
ERGIC1-208ENST00000520399 AKAP9Q99996 3911 aa5.77□□□□□ -1.49
ERGIC1-208ENST00000520399 CUBNO60494 3623 aa5.76□□□□□ -1.49
ERGIC1-208ENST00000520399 TENM1Q9UKZ4 2725 aa5.75□□□□□ -1.49
ERGIC1-208ENST00000520399 FBN1P35555 2871 aaKnown RBP5.68□□□□□ -1.5
ERGIC1-208ENST00000520399 KRTAP10-6P60371 365 aaPredicted RBP5.67□□□□□ -1.5
ERGIC1-208ENST00000520399 CRCT1Q9UGL9 99 aa5.67□□□□□ -1.5
ERGIC1-208ENST00000520399 TENM2Q9NT68 2774 aa5.66□□□□□ -1.5
ERGIC1-208ENST00000520399 TGP01266 2768 aa5.63□□□□□ -1.51
ERGIC1-208ENST00000520399 VWFP04275 2813 aa5.63□□□□□ -1.51
ERGIC1-208ENST00000520399 TRRAPQ9Y4A5 3859 aa5.61□□□□□ -1.51
ERGIC1-208ENST00000520399 TENM3Q9P273 2699 aa5.61□□□□□ -1.51
ERGIC1-208ENST00000520399 ZNF469Q96JG9 3925 aaPredicted RBP5.61□□□□□ -1.51
ERGIC1-208ENST00000520399 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
ERGIC1-208ENST00000520399 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
ERGIC1-208ENST00000520399 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
ERGIC1-208ENST00000520399 HUWE1Q7Z6Z7 4374 aaKnown RBP5.51□□□□□ -1.53
ERGIC1-208ENST00000520399 CMYA5Q8N3K9 4069 aa5.49□□□□□ -1.53
ERGIC1-208ENST00000520399 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
ERGIC1-208ENST00000520399 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
ERGIC1-208ENST00000520399 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
ERGIC1-208ENST00000520399 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
ERGIC1-208ENST00000520399 ANK2Q01484 3957 aa5.39□□□□□ -1.55
ERGIC1-208ENST00000520399 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
ERGIC1-208ENST00000520399 SRRM2Q9UQ35 2752 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms