RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-208ENST00000518963 DMDP11532 3685 aa0.66□□□□□ -2.3
PSD3-208ENST00000518963 VWFP04275 2813 aa0.65□□□□□ -2.3
PSD3-208ENST00000518963 MAP1BP46821 2468 aaKnown RBP0.65□□□□□ -2.3
PSD3-208ENST00000518963 NBEAQ8NFP9 2946 aa0.65□□□□□ -2.3
PSD3-208ENST00000518963 FRYLO94915 3013 aa0.65□□□□□ -2.3
PSD3-208ENST00000518963 CFAP47Q6ZTR5 3102 aa0.65□□□□□ -2.3
PSD3-208ENST00000518963 FAT2Q9NYQ8 4349 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 ATRQ13535 2644 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 DMXL1Q9Y485 3027 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 TNXBP22105 4242 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 EPG5Q9HCE0 2579 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 CHD8Q9HCK8 2581 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 KNL1Q8NG31 2342 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 VPS13AQ96RL7 3174 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 ZFYVE26Q68DK2 2539 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 ASPMQ8IZT6 3477 aa0.65□□□□□ -2.31
PSD3-208ENST00000518963 FAM186AA6NE01 2351 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 PTPN13Q12923 2485 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 RIF1Q5UIP0 2472 aaKnown RBP0.64□□□□□ -2.31
PSD3-208ENST00000518963 DNAH14Q0VDD8 3507 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 UBR4Q5T4S7 5183 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 MACF1Q9UPN3 7388 aaKnown RBP0.64□□□□□ -2.31
PSD3-208ENST00000518963 OTOGQ6ZRI0 2925 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 NDUFA1O15239 70 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 DUOX1Q9NRD9 1551 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 ACACBO00763 2458 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 NAV2Q8IVL1 2488 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 DCHS1Q96JQ0 3298 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 ZFHX4Q86UP3 3567 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 FRYQ5TBA9 3013 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 FASNP49327 2511 aaKnown RBP0.64□□□□□ -2.31
PSD3-208ENST00000518963 SPTA1P02549 2419 aa0.64□□□□□ -2.31
PSD3-208ENST00000518963 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
PSD3-208ENST00000518963 UTP20O75691 2785 aaKnown RBP0.63□□□□□ -2.31
PSD3-208ENST00000518963 WDFY3Q8IZQ1 3526 aa0.63□□□□□ -2.31
PSD3-208ENST00000518963 FLNBO75369 2602 aaKnown RBP0.63□□□□□ -2.31
PSD3-208ENST00000518963 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
PSD3-208ENST00000518963 CEP250Q9BV73 2442 aa0.63□□□□□ -2.31
PSD3-208ENST00000518963 DEFB131AP59861 70 aa0.63□□□□□ -2.31
PSD3-208ENST00000518963 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
PSD3-208ENST00000518963 CHD7Q9P2D1 2997 aa0.63□□□□□ -2.31
PSD3-208ENST00000518963 USP9XQ93008 2570 aaPredicted RBP0.63□□□□□ -2.31
PSD3-208ENST00000518963 TEP1Q99973 2627 aaKnown RBP0.63□□□□□ -2.31
PSD3-208ENST00000518963 NCOR2Q9Y618 2525 aa0.63□□□□□ -2.31
PSD3-208ENST00000518963 MYO18BQ8IUG5 2567 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 AKAP13Q12802 2813 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 MAST4O15021 2626 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 BSNQ9UPA5 3926 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 PRM1P04553 51 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 ITPR3Q14573 2671 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 SPEGQ15772 3267 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 DOPEY1Q5JWR5 2465 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 PCLOQ9Y6V0 5065 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 CFAP46Q8IYW2 2715 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 LAMA5O15230 3695 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 KALRNO60229 2985 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 IGSF10Q6WRI0 2623 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 ITPR1Q14643 2758 aa0.62□□□□□ -2.31
PSD3-208ENST00000518963 FREM2Q5SZK8 3169 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 COL12A1Q99715 3063 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 ZZEF1O43149 2961 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 HECTD1Q9ULT8 2610 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 DMXL2Q8TDJ6 3036 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 TEX15Q9BXT5 2789 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 CD52P31358 61 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 CREBBPQ92793 2442 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 LAMA1P25391 3075 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 IGF2RP11717 2491 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 CEP295Q9C0D2 2601 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 TENM3Q9P273 2699 aa0.61□□□□□ -2.31
PSD3-208ENST00000518963 SMG1Q96Q15 3661 aaKnown RBP0.6□□□□□ -2.31
PSD3-208ENST00000518963 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 IGLV5-48A0A075B6I7 105 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 C9orf92A6NGG3 77 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 CENPEQ02224 2701 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 RELNP78509 3460 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 NBPF19A0A087WUL8 3843 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 MYO9AB2RTY4 2548 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
PSD3-208ENST00000518963 SETD2Q9BYW2 2564 aaPredicted RBP0.59□□□□□ -2.31
PSD3-208ENST00000518963 SPTAN1Q13813 2472 aaKnown RBP0.59□□□□□ -2.31
PSD3-208ENST00000518963 ACACAQ13085 2346 aa0.59□□□□□ -2.31
PSD3-208ENST00000518963 CELSR3Q9NYQ7 3312 aa0.59□□□□□ -2.31
PSD3-208ENST00000518963 MGAQ8IWI9 3026 aa0.59□□□□□ -2.31
PSD3-208ENST00000518963 Q9Y3F1 56 aa0.59□□□□□ -2.31
PSD3-208ENST00000518963 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.31
PSD3-208ENST00000518963 LRBAP50851 2863 aa0.59□□□□□ -2.32
PSD3-208ENST00000518963 ATMQ13315 3056 aa0.58□□□□□ -2.32
PSD3-208ENST00000518963 PDZD2O15018 2839 aa0.58□□□□□ -2.32
PSD3-208ENST00000518963 NIPBLQ6KC79 2804 aaeCLIP0.58□□□□□ -2.32
PSD3-208ENST00000518963 KMT2AQ03164 3969 aa0.58□□□□□ -2.32
PSD3-208ENST00000518963 FLNCQ14315 2725 aa0.58□□□□□ -2.32
PSD3-208ENST00000518963 UBR5O95071 2799 aaPredicted RBP0.58□□□□□ -2.32
PSD3-208ENST00000518963 MAP1AP78559 2803 aaPredicted RBP0.58□□□□□ -2.32
PSD3-208ENST00000518963 LRRK2Q5S007 2527 aa0.58□□□□□ -2.32
PSD3-208ENST00000518963 ITPR2Q14571 2701 aa0.58□□□□□ -2.32
PSD3-208ENST00000518963 BOD1L1Q8NFC6 3051 aa0.57□□□□□ -2.32
PSD3-208ENST00000518963 PRRC2CQ9Y520 2896 aaKnown RBP0.57□□□□□ -2.32
PSD3-208ENST00000518963 MUC2Q02817 5179 aa0.57□□□□□ -2.32
PSD3-208ENST00000518963 APC2O95996 2303 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms