RNA–Protein interactions for RNA: ENST00000518963.5

PSD3-208, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-208ENST00000518963 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
PSD3-208ENST00000518963 CHIC1Q5VXU3 224 aa20.37■□□□□ 0.85
PSD3-208ENST00000518963 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
PSD3-208ENST00000518963 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
PSD3-208ENST00000518963 FOXD1Q16676 465 aa17.3■□□□□ 0.36
PSD3-208ENST00000518963 MSH5O43196 834 aa16.31■□□□□ 0.2
PSD3-208ENST00000518963 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
PSD3-208ENST00000518963 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
PSD3-208ENST00000518963 PIAS4Q8N2W9 510 aaPredicted RBP16.08■□□□□ 0.16
PSD3-208ENST00000518963 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
PSD3-208ENST00000518963 ADRA2BP18089 450 aa15.9■□□□□ 0.14
PSD3-208ENST00000518963 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
PSD3-208ENST00000518963 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
PSD3-208ENST00000518963 SCAF1Q9H7N4 1312 aaKnown RBP14.6□□□□□ -0.07
PSD3-208ENST00000518963 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
PSD3-208ENST00000518963 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
PSD3-208ENST00000518963 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
PSD3-208ENST00000518963 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
PSD3-208ENST00000518963 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
PSD3-208ENST00000518963 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
PSD3-208ENST00000518963 RNF216Q9NWF9 866 aaPredicted RBP13.88□□□□□ -0.19
PSD3-208ENST00000518963 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
PSD3-208ENST00000518963 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
PSD3-208ENST00000518963 KCNA4P22459 653 aa13.56□□□□□ -0.24
PSD3-208ENST00000518963 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
PSD3-208ENST00000518963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.27
PSD3-208ENST00000518963 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
PSD3-208ENST00000518963 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
PSD3-208ENST00000518963 DSG3P32926 999 aa12.91□□□□□ -0.34
PSD3-208ENST00000518963 SPINK5Q9NQ38 1064 aaPredicted RBP12.91□□□□□ -0.34
PSD3-208ENST00000518963 CAPN15O75808 1086 aa12.89□□□□□ -0.35
PSD3-208ENST00000518963 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
PSD3-208ENST00000518963 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
PSD3-208ENST00000518963 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
PSD3-208ENST00000518963 POTEHQ6S545 545 aa12.72□□□□□ -0.37
PSD3-208ENST00000518963 APLP2Q06481 763 aa12.68□□□□□ -0.38
PSD3-208ENST00000518963 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
PSD3-208ENST00000518963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
PSD3-208ENST00000518963 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
PSD3-208ENST00000518963 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
PSD3-208ENST00000518963 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
PSD3-208ENST00000518963 ABCB7O75027 752 aa12.56□□□□□ -0.4
PSD3-208ENST00000518963 ZBTB22O15209 634 aa12.53□□□□□ -0.4
PSD3-208ENST00000518963 SAMD1Q6SPF0 538 aaPredicted RBP12.53□□□□□ -0.4
PSD3-208ENST00000518963 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
PSD3-208ENST00000518963 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
PSD3-208ENST00000518963 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
PSD3-208ENST00000518963 POLA2Q14181 598 aa12.25□□□□□ -0.45
PSD3-208ENST00000518963 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
PSD3-208ENST00000518963 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
PSD3-208ENST00000518963 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.49
PSD3-208ENST00000518963 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
PSD3-208ENST00000518963 REM2Q8IYK8 340 aaPredicted RBP11.88□□□□□ -0.51
PSD3-208ENST00000518963 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
PSD3-208ENST00000518963 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
PSD3-208ENST00000518963 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
PSD3-208ENST00000518963 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
PSD3-208ENST00000518963 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
PSD3-208ENST00000518963 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSD3-208ENST00000518963 HAX1O00165 279 aa11.63□□□□□ -0.55
PSD3-208ENST00000518963 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
PSD3-208ENST00000518963 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
PSD3-208ENST00000518963 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
PSD3-208ENST00000518963 FBLN2P98095 1184 aa11.6□□□□□ -0.55
PSD3-208ENST00000518963 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
PSD3-208ENST00000518963 EVX2Q03828 476 aa11.48□□□□□ -0.57
PSD3-208ENST00000518963 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
PSD3-208ENST00000518963 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
PSD3-208ENST00000518963 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
PSD3-208ENST00000518963 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
PSD3-208ENST00000518963 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
PSD3-208ENST00000518963 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
PSD3-208ENST00000518963 FKBP8Q14318 412 aa11.33□□□□□ -0.6
PSD3-208ENST00000518963 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSD3-208ENST00000518963 GABBR2O75899 941 aa11.22□□□□□ -0.61
PSD3-208ENST00000518963 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
PSD3-208ENST00000518963 CHADLQ6NUI6 762 aa11.22□□□□□ -0.61
PSD3-208ENST00000518963 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.64
PSD3-208ENST00000518963 LHX8Q68G74 356 aa11.08□□□□□ -0.64
PSD3-208ENST00000518963 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
PSD3-208ENST00000518963 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
PSD3-208ENST00000518963 CLCN6P51797 869 aa11.04□□□□□ -0.64
PSD3-208ENST00000518963 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
PSD3-208ENST00000518963 PROM2Q8N271 834 aa10.95□□□□□ -0.66
PSD3-208ENST00000518963 STAG3Q9UJ98 1225 aa10.92□□□□□ -0.66
PSD3-208ENST00000518963 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
PSD3-208ENST00000518963 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
PSD3-208ENST00000518963 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
PSD3-208ENST00000518963 ZRANB1Q9UGI0 708 aa10.85□□□□□ -0.67
PSD3-208ENST00000518963 GALR2O43603 387 aaPredicted RBP10.75□□□□□ -0.69
PSD3-208ENST00000518963 FBXO3Q9UK99 471 aa10.75□□□□□ -0.69
PSD3-208ENST00000518963 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
PSD3-208ENST00000518963 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
PSD3-208ENST00000518963 MNX1P50219 401 aaPredicted RBP10.71□□□□□ -0.69
PSD3-208ENST00000518963 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
PSD3-208ENST00000518963 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
PSD3-208ENST00000518963 PHF12Q96QT6 1004 aa10.67□□□□□ -0.7
PSD3-208ENST00000518963 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
PSD3-208ENST00000518963 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
PSD3-208ENST00000518963 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms