RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 BOD1L1Q8NFC6 3051 aa0.99□□□□□ -2.25
RNU6-56P-201ENST00000516986 DEFB4AO15263 64 aa0.99□□□□□ -2.25
RNU6-56P-201ENST00000516986 LCE4AQ5TA78 99 aa0.99□□□□□ -2.25
RNU6-56P-201ENST00000516986 ACANP16112 2415 aa0.99□□□□□ -2.25
RNU6-56P-201ENST00000516986 ZFHX4Q86UP3 3567 aa0.99□□□□□ -2.25
RNU6-56P-201ENST00000516986 MAP1AP78559 2803 aaPredicted RBP0.98□□□□□ -2.25
RNU6-56P-201ENST00000516986 RIF1Q5UIP0 2472 aaKnown RBP0.98□□□□□ -2.25
RNU6-56P-201ENST00000516986 VPS13DQ5THJ4 4388 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 CFAP47Q6ZTR5 3102 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 COL12A1Q99715 3063 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 PIEZO1Q92508 2521 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 MKI67P46013 3256 aaKnown RBP0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 DCHS1Q96JQ0 3298 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 FREM2Q5SZK8 3169 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 CHD9Q3L8U1 2897 aa0.97□□□□□ -2.25
RNU6-56P-201ENST00000516986 UTRNP46939 3433 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 DCHS2Q6V1P9 2916 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 ATMQ13315 3056 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 POLQO75417 2590 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 CELSR3Q9NYQ7 3312 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 DNAH12Q6ZR08 3092 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 RELNP78509 3460 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 EPG5Q9HCE0 2579 aa0.96□□□□□ -2.26
RNU6-56P-201ENST00000516986 CACNA1AO00555 2505 aa0.95□□□□□ -2.26
RNU6-56P-201ENST00000516986 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
RNU6-56P-201ENST00000516986 KRTAP10-4P60372 401 aaPredicted RBP0.95□□□□□ -2.26
RNU6-56P-201ENST00000516986 SMR3AQ99954 134 aa0.95□□□□□ -2.26
RNU6-56P-201ENST00000516986 TENM4Q6N022 2769 aa0.95□□□□□ -2.26
RNU6-56P-201ENST00000516986 CHD8Q9HCK8 2581 aa0.95□□□□□ -2.26
RNU6-56P-201ENST00000516986 LRBAP50851 2863 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 MTORP42345 2549 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 DOPEY1Q5JWR5 2465 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 USP24Q9UPU5 2620 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 CENPEQ02224 2701 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 LCE3EQ5T5B0 92 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 DMXL2Q8TDJ6 3036 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 DNAH11Q96DT5 4516 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 CSMD3Q7Z407 3707 aa0.94□□□□□ -2.26
RNU6-56P-201ENST00000516986 LOC400499M0QZD8 3231 aa0.93□□□□□ -2.26
RNU6-56P-201ENST00000516986 KALRNO60229 2985 aa0.93□□□□□ -2.26
RNU6-56P-201ENST00000516986 SETXQ7Z333 2677 aaKnown RBP0.93□□□□□ -2.26
RNU6-56P-201ENST00000516986 LAMA1P25391 3075 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 BDP1A6H8Y1 2624 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 ATRQ13535 2644 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 HELZ2Q9BYK8 2649 aaKnown RBP0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 XIRP2A4UGR9 3374 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 CENPFP49454 3210 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 PCNTO95613 3336 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 KRTAP19-1Q8IUB9 90 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 EP400Q96L91 3159 aa0.92□□□□□ -2.26
RNU6-56P-201ENST00000516986 NF1P21359 2839 aa0.91□□□□□ -2.26
RNU6-56P-201ENST00000516986 LCE3DQ9BYE3 92 aa0.91□□□□□ -2.26
RNU6-56P-201ENST00000516986 KRTAP9-8Q9BYQ0 159 aa0.91□□□□□ -2.26
RNU6-56P-201ENST00000516986 CFAP46Q8IYW2 2715 aa0.91□□□□□ -2.26
RNU6-56P-201ENST00000516986 APCP25054 2843 aa0.9□□□□□ -2.26
RNU6-56P-201ENST00000516986 USP9YO00507 2555 aaPredicted RBP0.9□□□□□ -2.27
RNU6-56P-201ENST00000516986 ITPR3Q14573 2671 aa0.9□□□□□ -2.27
RNU6-56P-201ENST00000516986 FLNCQ14315 2725 aa0.9□□□□□ -2.27
RNU6-56P-201ENST00000516986 SPTAN1Q13813 2472 aaKnown RBP0.9□□□□□ -2.27
RNU6-56P-201ENST00000516986 TGP01266 2768 aa0.9□□□□□ -2.27
RNU6-56P-201ENST00000516986 SPENQ96T58 3664 aaKnown RBP0.9□□□□□ -2.27
RNU6-56P-201ENST00000516986 DMDP11532 3685 aa0.89□□□□□ -2.27
RNU6-56P-201ENST00000516986 FRAS1Q86XX4 4008 aa0.89□□□□□ -2.27
RNU6-56P-201ENST00000516986 NOTCH2Q04721 2471 aa0.89□□□□□ -2.27
RNU6-56P-201ENST00000516986 NIPBLQ6KC79 2804 aaeCLIP0.88□□□□□ -2.27
RNU6-56P-201ENST00000516986 TLN1Q9Y490 2541 aaKnown RBP0.88□□□□□ -2.27
RNU6-56P-201ENST00000516986 LCE3AQ5TA76 89 aa0.88□□□□□ -2.27
RNU6-56P-201ENST00000516986 SPTBN5Q9NRC6 3674 aaKnown RBP0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 MYCBP2O75592 4640 aa0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 BSNQ9UPA5 3926 aa0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 CSMD1Q96PZ7 3565 aa0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 GCN1Q92616 2671 aaKnown RBP0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 KMT2AQ03164 3969 aa0.87□□□□□ -2.27
RNU6-56P-201ENST00000516986 MUC3AQ02505 3323 aa0.86□□□□□ -2.27
RNU6-56P-201ENST00000516986 LAMA3Q16787 3333 aa0.86□□□□□ -2.27
RNU6-56P-201ENST00000516986 DNAH8Q96JB1 4490 aa0.86□□□□□ -2.27
RNU6-56P-201ENST00000516986 LAMA2P24043 3122 aaKnown RBP0.86□□□□□ -2.27
RNU6-56P-201ENST00000516986 ACACBO00763 2458 aa0.86□□□□□ -2.27
RNU6-56P-201ENST00000516986 LYSTQ99698 3801 aa0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 PDZD2O15018 2839 aa0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 USP9XQ93008 2570 aaPredicted RBP0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 PRM1P04553 51 aa0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 DNAH3Q8TD57 4116 aa0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 UNC80Q8N2C7 3258 aa0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 SMG1Q96Q15 3661 aaKnown RBP0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 USP34Q70CQ2 3546 aa0.85□□□□□ -2.27
RNU6-56P-201ENST00000516986 TRRAPQ9Y4A5 3859 aa0.84□□□□□ -2.27
RNU6-56P-201ENST00000516986 SACSQ9NZJ4 4579 aa0.84□□□□□ -2.27
RNU6-56P-201ENST00000516986 LAMA5O15230 3695 aa0.84□□□□□ -2.28
RNU6-56P-201ENST00000516986 VCANP13611 3396 aa0.84□□□□□ -2.28
RNU6-56P-201ENST00000516986 MYO18BQ8IUG5 2567 aa0.84□□□□□ -2.28
RNU6-56P-201ENST00000516986 VPS13BQ7Z7G8 4022 aa0.84□□□□□ -2.28
RNU6-56P-201ENST00000516986 ZANQ9Y493 2812 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms