RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
TPM3-222ENST00000515609 COX7CP15954 63 aa5.4□□□□□ -1.54
TPM3-222ENST00000515609 FP248Q71RG6 208 aaPredicted RBP5.4□□□□□ -1.54
TPM3-222ENST00000515609 WFDC13Q8IUB5 93 aa5.4□□□□□ -1.54
TPM3-222ENST00000515609 MMP24-AS1A0A0U1RRL7 71 aa5.39□□□□□ -1.55
TPM3-222ENST00000515609 KRTAP29-1A8MX34 341 aaPredicted RBP5.39□□□□□ -1.55
TPM3-222ENST00000515609 MRPL34Q9BQ48 92 aaKnown RBP5.39□□□□□ -1.55
TPM3-222ENST00000515609 C5orf47Q569G3 176 aa5.38□□□□□ -1.55
TPM3-222ENST00000515609 VPS13BQ7Z7G8 4022 aa5.37□□□□□ -1.55
TPM3-222ENST00000515609 MP68P56378 58 aa5.37□□□□□ -1.55
TPM3-222ENST00000515609 OCR1Q9BZK8 76 aa5.37□□□□□ -1.55
TPM3-222ENST00000515609 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
TPM3-222ENST00000515609 NDUFS5O43920 106 aa5.36□□□□□ -1.55
TPM3-222ENST00000515609 BIRC6Q9NR09 4857 aa5.36□□□□□ -1.55
TPM3-222ENST00000515609 H3BPC8 53 aa5.35□□□□□ -1.55
TPM3-222ENST00000515609 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
TPM3-222ENST00000515609 NDUFC1O43677 76 aa5.33□□□□□ -1.56
TPM3-222ENST00000515609 EPPK1P58107 5090 aaKnown RBP5.32□□□□□ -1.56
TPM3-222ENST00000515609 J3QL48 77 aa5.32□□□□□ -1.56
TPM3-222ENST00000515609 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
TPM3-222ENST00000515609 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
TPM3-222ENST00000515609 Q8N9P0 234 aaPredicted RBP5.3□□□□□ -1.56
TPM3-222ENST00000515609 IGLV7-46A0A075B6I9 117 aa5.29□□□□□ -1.56
TPM3-222ENST00000515609 KLKP1Q107X0 134 aa5.29□□□□□ -1.56
TPM3-222ENST00000515609 C20orf197Q8N268 126 aa5.29□□□□□ -1.56
TPM3-222ENST00000515609 H0Y9P7 68 aa5.28□□□□□ -1.56
TPM3-222ENST00000515609 NOTCH2NLQ7Z3S9 236 aa5.28□□□□□ -1.56
TPM3-222ENST00000515609 RETNLBQ9BQ08 111 aa5.27□□□□□ -1.57
TPM3-222ENST00000515609 HSPG2P98160 4391 aa5.27□□□□□ -1.57
TPM3-222ENST00000515609 CCDC179H3BU77 68 aa5.26□□□□□ -1.57
TPM3-222ENST00000515609 RYR1P21817 5038 aa5.25□□□□□ -1.57
TPM3-222ENST00000515609 FAT1Q14517 4588 aa5.25□□□□□ -1.57
TPM3-222ENST00000515609 LOC101927531A0A1B0GV80 90 aa5.25□□□□□ -1.57
TPM3-222ENST00000515609 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
TPM3-222ENST00000515609 FLG2Q5D862 2391 aaPredicted RBP5.24□□□□□ -1.57
TPM3-222ENST00000515609 A0A0U1RQV1 116 aa5.24□□□□□ -1.57
TPM3-222ENST00000515609 PRR4Q16378 134 aa5.24□□□□□ -1.57
TPM3-222ENST00000515609 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
TPM3-222ENST00000515609 LINC00208Q96KT6 92 aa5.24□□□□□ -1.57
TPM3-222ENST00000515609 KRTAP4-5Q9BYR2 181 aa5.24□□□□□ -1.57
TPM3-222ENST00000515609 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
TPM3-222ENST00000515609 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
TPM3-222ENST00000515609 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
TPM3-222ENST00000515609 A8MUU9 505 aa5.22□□□□□ -1.57
TPM3-222ENST00000515609 TMEM258P61165 79 aa5.22□□□□□ -1.57
TPM3-222ENST00000515609 Q75L30 129 aa5.22□□□□□ -1.57
TPM3-222ENST00000515609 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
TPM3-222ENST00000515609 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
TPM3-222ENST00000515609 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
TPM3-222ENST00000515609 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
TPM3-222ENST00000515609 ATP11AUNQ6ZP68 121 aa5.2□□□□□ -1.58
TPM3-222ENST00000515609 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
TPM3-222ENST00000515609 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
TPM3-222ENST00000515609 KRTAP13-3Q3SY46 172 aa5.19□□□□□ -1.58
TPM3-222ENST00000515609 H7BZZ5 65 aa5.17□□□□□ -1.58
TPM3-222ENST00000515609 SPANXA2-OT1Q8N9U9 137 aa5.16□□□□□ -1.58
TPM3-222ENST00000515609 Q5W150 140 aa5.15□□□□□ -1.59
TPM3-222ENST00000515609 C7orf65Q6ZTY9 151 aa5.15□□□□□ -1.59
TPM3-222ENST00000515609 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
TPM3-222ENST00000515609 RPL37P61927 97 aaKnown RBP5.14□□□□□ -1.59
TPM3-222ENST00000515609 CYP4F30PQ9H0H9 118 aa5.14□□□□□ -1.59
TPM3-222ENST00000515609 FAM236DA0A1B0GTK5 79 aa5.13□□□□□ -1.59
TPM3-222ENST00000515609 FAM236CP0DP71 79 aa5.13□□□□□ -1.59
TPM3-222ENST00000515609 XP32Q5T750 250 aa5.13□□□□□ -1.59
TPM3-222ENST00000515609 IGKV2D-30A0A075B6S6 120 aa5.11□□□□□ -1.59
TPM3-222ENST00000515609 PCLOQ9Y6V0 5065 aa5.1□□□□□ -1.59
TPM3-222ENST00000515609 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
TPM3-222ENST00000515609 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
TPM3-222ENST00000515609 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
TPM3-222ENST00000515609 HERC2O95714 4834 aa5.07□□□□□ -1.6
TPM3-222ENST00000515609 SPINK7P58062 85 aa5.06□□□□□ -1.6
TPM3-222ENST00000515609 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
TPM3-222ENST00000515609 A8MUN3 132 aa5.05□□□□□ -1.6
TPM3-222ENST00000515609 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
TPM3-222ENST00000515609 SERP1Q9Y6X1 66 aa5.05□□□□□ -1.6
TPM3-222ENST00000515609 TNXBP22105 4242 aa5.04□□□□□ -1.6
TPM3-222ENST00000515609 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
TPM3-222ENST00000515609 HRES1P13985 223 aa5.03□□□□□ -1.6
TPM3-222ENST00000515609 ACYP2P14621 99 aa5.03□□□□□ -1.6
TPM3-222ENST00000515609 MYCBP2O75592 4640 aa5.02□□□□□ -1.61
TPM3-222ENST00000515609 DMAC1Q96GE9 116 aa4.99□□□□□ -1.61
TPM3-222ENST00000515609 RBM12B-AS1Q9P1G2 102 aa4.97□□□□□ -1.61
TPM3-222ENST00000515609 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
TPM3-222ENST00000515609 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
TPM3-222ENST00000515609 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
TPM3-222ENST00000515609 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
TPM3-222ENST00000515609 SMIM26A0A096LP01 95 aa4.93□□□□□ -1.62
TPM3-222ENST00000515609 COA5Q86WW8 74 aa4.93□□□□□ -1.62
TPM3-222ENST00000515609 ABCA13Q86UQ4 5058 aa4.91□□□□□ -1.62
TPM3-222ENST00000515609 V9GYY9 64 aa4.91□□□□□ -1.62
TPM3-222ENST00000515609 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
TPM3-222ENST00000515609 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
TPM3-222ENST00000515609 Q1T7F1 81 aa4.81□□□□□ -1.64
TPM3-222ENST00000515609 SEC61GP60059 68 aa4.8□□□□□ -1.64
TPM3-222ENST00000515609 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
TPM3-222ENST00000515609 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
TPM3-222ENST00000515609 S4R3F8 94 aa4.8□□□□□ -1.64
TPM3-222ENST00000515609 HERC1Q15751 4861 aa4.77□□□□□ -1.65
TPM3-222ENST00000515609 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
TPM3-222ENST00000515609 CSAG1Q6PB30 78 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms