RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ATOX1O00244 68 aa11.28□□□□□ -0.6
SSBP2-218ENST00000514493 MT1HL1P0DM35 61 aa11.28□□□□□ -0.6
SSBP2-218ENST00000514493 ANAPC13Q9BS18 74 aa11.28□□□□□ -0.6
SSBP2-218ENST00000514493 PRR15Q8IV56 129 aa11.27□□□□□ -0.61
SSBP2-218ENST00000514493 NDUFB1O75438 58 aa11.26□□□□□ -0.61
SSBP2-218ENST00000514493 DMBT1Q9UGM3 2413 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-218ENST00000514493 KRTAP29-1A8MX34 341 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-218ENST00000514493 HCG22E2RYF7 251 aa11.22□□□□□ -0.61
SSBP2-218ENST00000514493 C1orf195Q5TG92 126 aa11.21□□□□□ -0.61
SSBP2-218ENST00000514493 A0A1B0GVX0 72 aa11.19□□□□□ -0.62
SSBP2-218ENST00000514493 HERC1Q15751 4861 aa11.18□□□□□ -0.62
SSBP2-218ENST00000514493 IGHV6-1A0A0B4J1U7 121 aa11.15□□□□□ -0.62
SSBP2-218ENST00000514493 MMP24-AS1A0A0U1RRL7 71 aa11.15□□□□□ -0.62
SSBP2-218ENST00000514493 J3QL48 77 aa11.15□□□□□ -0.62
SSBP2-218ENST00000514493 SMIM20Q8N5G0 67 aa11.15□□□□□ -0.62
SSBP2-218ENST00000514493 WFDC13Q8IUB5 93 aa11.14□□□□□ -0.63
SSBP2-218ENST00000514493 CASC2Q6XLA1 102 aa11.13□□□□□ -0.63
SSBP2-218ENST00000514493 SERP2Q8N6R1 65 aa11.13□□□□□ -0.63
SSBP2-218ENST00000514493 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
SSBP2-218ENST00000514493 TRAV7A0A075B6U4 112 aa11.1□□□□□ -0.63
SSBP2-218ENST00000514493 hDV103S1A0JD37 113 aa11.08□□□□□ -0.64
SSBP2-218ENST00000514493 COX7CP15954 63 aa11.08□□□□□ -0.64
SSBP2-218ENST00000514493 OCR1Q9BZK8 76 aa11.08□□□□□ -0.64
SSBP2-218ENST00000514493 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
SSBP2-218ENST00000514493 C8orf87E5RJ46 101 aa11.05□□□□□ -0.64
SSBP2-218ENST00000514493 UQCRQO14949 82 aa11.05□□□□□ -0.64
SSBP2-218ENST00000514493 NOTCH2NLQ7Z3S9 236 aa11.04□□□□□ -0.64
SSBP2-218ENST00000514493 CCDC179H3BU77 68 aa11.03□□□□□ -0.64
SSBP2-218ENST00000514493 TMEM254Q8TBM7 123 aa11.01□□□□□ -0.65
SSBP2-218ENST00000514493 LINC00313P59037 77 aa10.99□□□□□ -0.65
SSBP2-218ENST00000514493 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
SSBP2-218ENST00000514493 FP248Q71RG6 208 aaPredicted RBP10.98□□□□□ -0.65
SSBP2-218ENST00000514493 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
SSBP2-218ENST00000514493 TP53AIP1Q9HCN2 124 aa10.9□□□□□ -0.66
SSBP2-218ENST00000514493 NDUFS5O43920 106 aa10.9□□□□□ -0.67
SSBP2-218ENST00000514493 KRTAP16-1A8MUX0 517 aa10.89□□□□□ -0.67
SSBP2-218ENST00000514493 C5orf47Q569G3 176 aa10.88□□□□□ -0.67
SSBP2-218ENST00000514493 IGLV7-46A0A075B6I9 117 aa10.87□□□□□ -0.67
SSBP2-218ENST00000514493 HMCN2Q8NDA2 5059 aa10.85□□□□□ -0.67
SSBP2-218ENST00000514493 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
SSBP2-218ENST00000514493 KLKP1Q107X0 134 aa10.85□□□□□ -0.67
SSBP2-218ENST00000514493 PRR4Q16378 134 aa10.85□□□□□ -0.67
SSBP2-218ENST00000514493 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
SSBP2-218ENST00000514493 TRAV22A0A0B4J277 110 aa10.82□□□□□ -0.68
SSBP2-218ENST00000514493 A0A0U1RQV1 116 aa10.82□□□□□ -0.68
SSBP2-218ENST00000514493 MP68P56378 58 aa10.82□□□□□ -0.68
SSBP2-218ENST00000514493 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
SSBP2-218ENST00000514493 H0Y9P7 68 aa10.81□□□□□ -0.68
SSBP2-218ENST00000514493 CYSTM1Q9H1C7 97 aa10.8□□□□□ -0.68
SSBP2-218ENST00000514493 KRTAP13-3Q3SY46 172 aa10.79□□□□□ -0.68
SSBP2-218ENST00000514493 H3BPC8 53 aa10.76□□□□□ -0.69
SSBP2-218ENST00000514493 TPRXLQ17RH7 258 aa10.74□□□□□ -0.69
SSBP2-218ENST00000514493 ZCCHC13Q8WW36 166 aaKnown RBP10.74□□□□□ -0.69
SSBP2-218ENST00000514493 LINC00208Q96KT6 92 aa10.73□□□□□ -0.69
SSBP2-218ENST00000514493 NDUFC1O43677 76 aa10.72□□□□□ -0.69
SSBP2-218ENST00000514493 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
SSBP2-218ENST00000514493 Q5W150 140 aa10.71□□□□□ -0.69
SSBP2-218ENST00000514493 A8MUU9 505 aa10.7□□□□□ -0.7
SSBP2-218ENST00000514493 H7BZZ5 65 aa10.7□□□□□ -0.7
SSBP2-218ENST00000514493 C1orf64Q8NEQ6 169 aa10.69□□□□□ -0.7
SSBP2-218ENST00000514493 LPAP08519 4548 aa10.67□□□□□ -0.7
SSBP2-218ENST00000514493 XP32Q5T750 250 aa10.67□□□□□ -0.7
SSBP2-218ENST00000514493 Q75L30 129 aa10.65□□□□□ -0.7
SSBP2-218ENST00000514493 TMEM258P61165 79 aa10.64□□□□□ -0.71
SSBP2-218ENST00000514493 LRP2P98164 4655 aa10.63□□□□□ -0.71
SSBP2-218ENST00000514493 LOC101927531A0A1B0GV80 90 aa10.62□□□□□ -0.71
SSBP2-218ENST00000514493 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
SSBP2-218ENST00000514493 UBR4Q5T4S7 5183 aa10.54□□□□□ -0.72
SSBP2-218ENST00000514493 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
SSBP2-218ENST00000514493 IGKV2-30P06310 120 aa10.53□□□□□ -0.72
SSBP2-218ENST00000514493 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
SSBP2-218ENST00000514493 CYP4F30PQ9H0H9 118 aa10.52□□□□□ -0.72
SSBP2-218ENST00000514493 PCOTHQ58A44 107 aa10.5□□□□□ -0.73
SSBP2-218ENST00000514493 ATP5EP56381 51 aaPredicted RBP10.49□□□□□ -0.73
SSBP2-218ENST00000514493 ATP11AUNQ6ZP68 121 aa10.49□□□□□ -0.73
SSBP2-218ENST00000514493 IGKV2D-30A0A075B6S6 120 aa10.47□□□□□ -0.73
SSBP2-218ENST00000514493 SPANXA2-OT1Q8N9U9 137 aa10.46□□□□□ -0.74
SSBP2-218ENST00000514493 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
SSBP2-218ENST00000514493 HRES1P13985 223 aa10.36□□□□□ -0.75
SSBP2-218ENST00000514493 SEC61BP60468 96 aaKnown RBP10.36□□□□□ -0.75
SSBP2-218ENST00000514493 SPINK7P58062 85 aa10.33□□□□□ -0.76
SSBP2-218ENST00000514493 MUC17Q685J3 4493 aa10.33□□□□□ -0.76
SSBP2-218ENST00000514493 RNF213Q63HN8 5207 aa10.31□□□□□ -0.76
SSBP2-218ENST00000514493 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
SSBP2-218ENST00000514493 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
SSBP2-218ENST00000514493 DMAC1Q96GE9 116 aa10.21□□□□□ -0.77
SSBP2-218ENST00000514493 MUC2Q02817 5179 aa10.19□□□□□ -0.78
SSBP2-218ENST00000514493 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
SSBP2-218ENST00000514493 ACYP2P14621 99 aa10.14□□□□□ -0.79
SSBP2-218ENST00000514493 COA5Q86WW8 74 aa10.14□□□□□ -0.79
SSBP2-218ENST00000514493 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
SSBP2-218ENST00000514493 A8MUN3 132 aa10.12□□□□□ -0.79
SSBP2-218ENST00000514493 COX6B2Q6YFQ2 88 aa10.07□□□□□ -0.8
SSBP2-218ENST00000514493 MPLKIPQ8TAP9 179 aa10.05□□□□□ -0.8
SSBP2-218ENST00000514493 KRTAP3-1Q9BYR8 98 aa10.04□□□□□ -0.8
SSBP2-218ENST00000514493 SMIM26A0A096LP01 95 aa10.02□□□□□ -0.81
SSBP2-218ENST00000514493 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
SSBP2-218ENST00000514493 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
SSBP2-218ENST00000514493 KRTAP19-2Q3LHN2 52 aa9.86□□□□□ -0.83
SSBP2-218ENST00000514493 FAT4Q6V0I7 4981 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms