RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 ATMQ13315 3056 aa6.8□□□□□ -1.32
COL11A1-210ENST00000512756 FREM2Q5SZK8 3169 aa6.78□□□□□ -1.32
COL11A1-210ENST00000512756 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
COL11A1-210ENST00000512756 KRTAP21-3Q3LHN1 58 aa6.76□□□□□ -1.33
COL11A1-210ENST00000512756 NBEAQ8NFP9 2946 aa6.76□□□□□ -1.33
COL11A1-210ENST00000512756 DMXL2Q8TDJ6 3036 aa6.75□□□□□ -1.33
COL11A1-210ENST00000512756 ASH1LQ9NR48 2969 aaKnown RBP6.74□□□□□ -1.33
COL11A1-210ENST00000512756 COL12A1Q99715 3063 aa6.74□□□□□ -1.33
COL11A1-210ENST00000512756 EYSQ5T1H1 3165 aa6.73□□□□□ -1.33
COL11A1-210ENST00000512756 TNP1P09430 55 aa6.73□□□□□ -1.33
COL11A1-210ENST00000512756 NDUFAF8A1L188 74 aa6.72□□□□□ -1.33
COL11A1-210ENST00000512756 ADGRG4Q8IZF6 3080 aa6.72□□□□□ -1.33
COL11A1-210ENST00000512756 COL6A3P12111 3177 aa6.72□□□□□ -1.33
COL11A1-210ENST00000512756 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.33
COL11A1-210ENST00000512756 LRBAP50851 2863 aa6.71□□□□□ -1.33
COL11A1-210ENST00000512756 CELSR3Q9NYQ7 3312 aa6.69□□□□□ -1.34
COL11A1-210ENST00000512756 TENM4Q6N022 2769 aa6.69□□□□□ -1.34
COL11A1-210ENST00000512756 FRYLO94915 3013 aa6.68□□□□□ -1.34
COL11A1-210ENST00000512756 CELSR2Q9HCU4 2923 aa6.66□□□□□ -1.34
COL11A1-210ENST00000512756 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
COL11A1-210ENST00000512756 XP32Q5T750 250 aa6.63□□□□□ -1.35
COL11A1-210ENST00000512756 LAMA1P25391 3075 aa6.63□□□□□ -1.35
COL11A1-210ENST00000512756 ZZEF1O43149 2961 aa6.61□□□□□ -1.35
COL11A1-210ENST00000512756 BOD1L1Q8NFC6 3051 aa6.6□□□□□ -1.35
COL11A1-210ENST00000512756 H0YAA0 97 aa6.58□□□□□ -1.36
COL11A1-210ENST00000512756 DCHS2Q6V1P9 2916 aa6.57□□□□□ -1.36
COL11A1-210ENST00000512756 VCANP13611 3396 aa6.56□□□□□ -1.36
COL11A1-210ENST00000512756 C10orf95Q9H7T3 257 aa6.55□□□□□ -1.36
COL11A1-210ENST00000512756 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
COL11A1-210ENST00000512756 ZANQ9Y493 2812 aa6.55□□□□□ -1.36
COL11A1-210ENST00000512756 TPRXLQ17RH7 258 aa6.52□□□□□ -1.37
COL11A1-210ENST00000512756 CRYBG3Q68DQ2 2970 aa6.5□□□□□ -1.37
COL11A1-210ENST00000512756 MUC3AQ02505 3323 aa6.5□□□□□ -1.37
COL11A1-210ENST00000512756 P0C880 135 aa6.47□□□□□ -1.37
COL11A1-210ENST00000512756 HRNRQ86YZ3 2850 aaPredicted RBP6.45□□□□□ -1.38
COL11A1-210ENST00000512756 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
COL11A1-210ENST00000512756 DMDP11532 3685 aa6.44□□□□□ -1.38
COL11A1-210ENST00000512756 TENM3Q9P273 2699 aa6.44□□□□□ -1.38
COL11A1-210ENST00000512756 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
COL11A1-210ENST00000512756 MYO15AQ9UKN7 3530 aa6.41□□□□□ -1.38
COL11A1-210ENST00000512756 CFAP47Q6ZTR5 3102 aa6.4□□□□□ -1.38
COL11A1-210ENST00000512756 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
COL11A1-210ENST00000512756 FBN2P35556 2912 aa6.37□□□□□ -1.39
COL11A1-210ENST00000512756 NF1P21359 2839 aa6.37□□□□□ -1.39
COL11A1-210ENST00000512756 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
COL11A1-210ENST00000512756 WDFY3Q8IZQ1 3526 aa6.35□□□□□ -1.39
COL11A1-210ENST00000512756 DMXL1Q9Y485 3027 aa6.35□□□□□ -1.39
COL11A1-210ENST00000512756 TGP01266 2768 aa6.31□□□□□ -1.4
COL11A1-210ENST00000512756 BSNQ9UPA5 3926 aa6.3□□□□□ -1.4
COL11A1-210ENST00000512756 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
COL11A1-210ENST00000512756 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
COL11A1-210ENST00000512756 DCHS1Q96JQ0 3298 aa6.25□□□□□ -1.41
COL11A1-210ENST00000512756 TENM2Q9NT68 2774 aa6.25□□□□□ -1.41
COL11A1-210ENST00000512756 SPEGQ15772 3267 aa6.24□□□□□ -1.41
COL11A1-210ENST00000512756 CELSR1Q9NYQ6 3014 aa6.22□□□□□ -1.41
COL11A1-210ENST00000512756 ZFHX4Q86UP3 3567 aa6.2□□□□□ -1.42
COL11A1-210ENST00000512756 MXRA5Q9NR99 2828 aa6.19□□□□□ -1.42
COL11A1-210ENST00000512756 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
COL11A1-210ENST00000512756 LOC400499M0QZD8 3231 aa6.12□□□□□ -1.43
COL11A1-210ENST00000512756 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
COL11A1-210ENST00000512756 SPENQ96T58 3664 aaKnown RBP6.09□□□□□ -1.43
COL11A1-210ENST00000512756 KRTAP12-1P59990 96 aa6.08□□□□□ -1.44
COL11A1-210ENST00000512756 PKD1L1Q8TDX9 2849 aa6.07□□□□□ -1.44
COL11A1-210ENST00000512756 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
COL11A1-210ENST00000512756 PDZD2O15018 2839 aa6.06□□□□□ -1.44
COL11A1-210ENST00000512756 ASPMQ8IZT6 3477 aa6.02□□□□□ -1.45
COL11A1-210ENST00000512756 VWFP04275 2813 aa5.98□□□□□ -1.45
COL11A1-210ENST00000512756 LAMA5O15230 3695 aa5.94□□□□□ -1.46
COL11A1-210ENST00000512756 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
COL11A1-210ENST00000512756 RELNP78509 3460 aa5.9□□□□□ -1.47
COL11A1-210ENST00000512756 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
COL11A1-210ENST00000512756 ANK3Q12955 4377 aaKnown RBP5.8□□□□□ -1.48
COL11A1-210ENST00000512756 FBN1P35555 2871 aaKnown RBP5.8□□□□□ -1.48
COL11A1-210ENST00000512756 SMG1Q96Q15 3661 aaKnown RBP5.79□□□□□ -1.48
COL11A1-210ENST00000512756 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
COL11A1-210ENST00000512756 OTOGQ6ZRI0 2925 aa5.76□□□□□ -1.49
COL11A1-210ENST00000512756 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
COL11A1-210ENST00000512756 NBPF19A0A087WUL8 3843 aa5.73□□□□□ -1.49
COL11A1-210ENST00000512756 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
COL11A1-210ENST00000512756 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
COL11A1-210ENST00000512756 KRTAP3-2Q9BYR7 98 aa5.7□□□□□ -1.5
COL11A1-210ENST00000512756 MT1HL1P0DM35 61 aa5.7□□□□□ -1.5
COL11A1-210ENST00000512756 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
COL11A1-210ENST00000512756 COL7A1Q02388 2944 aa5.59□□□□□ -1.51
COL11A1-210ENST00000512756 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
COL11A1-210ENST00000512756 ZNF469Q96JG9 3925 aaPredicted RBP5.58□□□□□ -1.52
COL11A1-210ENST00000512756 INE1O15225 51 aa5.57□□□□□ -1.52
COL11A1-210ENST00000512756 ZFHX3Q15911 3703 aa5.56□□□□□ -1.52
COL11A1-210ENST00000512756 CSMD1Q96PZ7 3565 aa5.54□□□□□ -1.52
COL11A1-210ENST00000512756 VPS13CQ709C8 3753 aa5.54□□□□□ -1.52
COL11A1-210ENST00000512756 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
COL11A1-210ENST00000512756 ANK2Q01484 3957 aa5.52□□□□□ -1.53
COL11A1-210ENST00000512756 CSMD2Q7Z408 3487 aa5.51□□□□□ -1.53
COL11A1-210ENST00000512756 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
COL11A1-210ENST00000512756 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
COL11A1-210ENST00000512756 CMYA5Q8N3K9 4069 aa5.48□□□□□ -1.53
COL11A1-210ENST00000512756 SVEP1Q4LDE5 3571 aa5.41□□□□□ -1.54
COL11A1-210ENST00000512756 KRTAP12-3P60328 96 aa5.4□□□□□ -1.55
COL11A1-210ENST00000512756 TRRAPQ9Y4A5 3859 aa5.37□□□□□ -1.55
COL11A1-210ENST00000512756 CUBNO60494 3623 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 447 ms