RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 Q8N9L7 120 aa6.74□□□□□ -1.33
SGCA-207ENST00000511303 DMBT1Q9UGM3 2413 aaPredicted RBP6.73□□□□□ -1.33
SGCA-207ENST00000511303 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
SGCA-207ENST00000511303 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
SGCA-207ENST00000511303 A0A087WVE0 104 aa6.71□□□□□ -1.34
SGCA-207ENST00000511303 HCG22E2RYF7 251 aa6.71□□□□□ -1.34
SGCA-207ENST00000511303 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
SGCA-207ENST00000511303 TNXBP22105 4242 aa6.7□□□□□ -1.34
SGCA-207ENST00000511303 IGHV6-1A0A0B4J1U7 121 aa6.7□□□□□ -1.34
SGCA-207ENST00000511303 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
SGCA-207ENST00000511303 FAM236AA0A1B0GUQ0 79 aa6.69□□□□□ -1.34
SGCA-207ENST00000511303 FAM236BA0A1B0GV22 79 aa6.69□□□□□ -1.34
SGCA-207ENST00000511303 LINC00313P59037 77 aa6.69□□□□□ -1.34
SGCA-207ENST00000511303 MYCBP2O75592 4640 aa6.69□□□□□ -1.34
SGCA-207ENST00000511303 CASC2Q6XLA1 102 aa6.68□□□□□ -1.34
SGCA-207ENST00000511303 SMIM20Q8N5G0 67 aa6.68□□□□□ -1.34
SGCA-207ENST00000511303 MMP24-AS1A0A0U1RRL7 71 aa6.67□□□□□ -1.34
SGCA-207ENST00000511303 hDV103S1A0JD37 113 aa6.67□□□□□ -1.34
SGCA-207ENST00000511303 J3QL48 77 aa6.67□□□□□ -1.34
SGCA-207ENST00000511303 ATOX1O00244 68 aa6.67□□□□□ -1.34
SGCA-207ENST00000511303 TMEM254Q8TBM7 123 aa6.66□□□□□ -1.34
SGCA-207ENST00000511303 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
SGCA-207ENST00000511303 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
SGCA-207ENST00000511303 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
SGCA-207ENST00000511303 RETNLBQ9BQ08 111 aa6.62□□□□□ -1.35
SGCA-207ENST00000511303 IGLV7-46A0A075B6I9 117 aa6.61□□□□□ -1.35
SGCA-207ENST00000511303 TP53AIP1Q9HCN2 124 aa6.61□□□□□ -1.35
SGCA-207ENST00000511303 TRAV7A0A075B6U4 112 aa6.6□□□□□ -1.35
SGCA-207ENST00000511303 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
SGCA-207ENST00000511303 OCR1Q9BZK8 76 aa6.59□□□□□ -1.35
SGCA-207ENST00000511303 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
SGCA-207ENST00000511303 PCP4P48539 62 aa6.58□□□□□ -1.36
SGCA-207ENST00000511303 SERP2Q8N6R1 65 aa6.58□□□□□ -1.36
SGCA-207ENST00000511303 ANAPC13Q9BS18 74 aa6.58□□□□□ -1.36
SGCA-207ENST00000511303 UQCRQO14949 82 aa6.57□□□□□ -1.36
SGCA-207ENST00000511303 PRR4Q16378 134 aa6.55□□□□□ -1.36
SGCA-207ENST00000511303 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
SGCA-207ENST00000511303 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
SGCA-207ENST00000511303 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
SGCA-207ENST00000511303 C20orf166-AS1Q96NR2 134 aa6.54□□□□□ -1.36
SGCA-207ENST00000511303 NDUFS5O43920 106 aa6.53□□□□□ -1.36
SGCA-207ENST00000511303 A8MUU9 505 aa6.52□□□□□ -1.37
SGCA-207ENST00000511303 COX7CP15954 63 aa6.52□□□□□ -1.37
SGCA-207ENST00000511303 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
SGCA-207ENST00000511303 H3BPC8 53 aa6.5□□□□□ -1.37
SGCA-207ENST00000511303 Q75L30 129 aa6.5□□□□□ -1.37
SGCA-207ENST00000511303 MP68P56378 58 aa6.48□□□□□ -1.37
SGCA-207ENST00000511303 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
SGCA-207ENST00000511303 XP32Q5T750 250 aa6.45□□□□□ -1.38
SGCA-207ENST00000511303 H0Y9P7 68 aa6.44□□□□□ -1.38
SGCA-207ENST00000511303 ZCCHC13Q8WW36 166 aaKnown RBP6.44□□□□□ -1.38
SGCA-207ENST00000511303 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
SGCA-207ENST00000511303 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
SGCA-207ENST00000511303 Q5W150 140 aa6.42□□□□□ -1.38
SGCA-207ENST00000511303 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
SGCA-207ENST00000511303 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
SGCA-207ENST00000511303 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
SGCA-207ENST00000511303 C20orf197Q8N268 126 aa6.41□□□□□ -1.38
SGCA-207ENST00000511303 HMCN2Q8NDA2 5059 aa6.4□□□□□ -1.38
SGCA-207ENST00000511303 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.38
SGCA-207ENST00000511303 LINC00208Q96KT6 92 aa6.4□□□□□ -1.38
SGCA-207ENST00000511303 NDUFC1O43677 76 aa6.39□□□□□ -1.39
SGCA-207ENST00000511303 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
SGCA-207ENST00000511303 CCDC179H3BU77 68 aa6.38□□□□□ -1.39
SGCA-207ENST00000511303 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
SGCA-207ENST00000511303 CYP4F30PQ9H0H9 118 aa6.34□□□□□ -1.39
SGCA-207ENST00000511303 SNURFQ9Y675 71 aa6.34□□□□□ -1.39
SGCA-207ENST00000511303 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
SGCA-207ENST00000511303 C7orf65Q6ZTY9 151 aa6.31□□□□□ -1.4
SGCA-207ENST00000511303 IGKV2D-30A0A075B6S6 120 aa6.28□□□□□ -1.4
SGCA-207ENST00000511303 H7BZZ5 65 aa6.28□□□□□ -1.4
SGCA-207ENST00000511303 SPINK7P58062 85 aa6.28□□□□□ -1.4
SGCA-207ENST00000511303 PCOTHQ58A44 107 aa6.27□□□□□ -1.41
SGCA-207ENST00000511303 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
SGCA-207ENST00000511303 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
SGCA-207ENST00000511303 TMEM258P61165 79 aa6.24□□□□□ -1.41
SGCA-207ENST00000511303 ATP5EP56381 51 aaPredicted RBP6.22□□□□□ -1.41
SGCA-207ENST00000511303 LRP2P98164 4655 aa6.2□□□□□ -1.42
SGCA-207ENST00000511303 HRES1P13985 223 aa6.2□□□□□ -1.42
SGCA-207ENST00000511303 LPAP08519 4548 aa6.19□□□□□ -1.42
SGCA-207ENST00000511303 RNF213Q63HN8 5207 aa6.15□□□□□ -1.42
SGCA-207ENST00000511303 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
SGCA-207ENST00000511303 A8MUN3 132 aa6.15□□□□□ -1.42
SGCA-207ENST00000511303 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
SGCA-207ENST00000511303 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
SGCA-207ENST00000511303 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
SGCA-207ENST00000511303 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
SGCA-207ENST00000511303 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
SGCA-207ENST00000511303 ACYP2P14621 99 aa6.11□□□□□ -1.43
SGCA-207ENST00000511303 RBM12B-AS1Q9P1G2 102 aa6.11□□□□□ -1.43
SGCA-207ENST00000511303 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
SGCA-207ENST00000511303 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
SGCA-207ENST00000511303 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
SGCA-207ENST00000511303 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
SGCA-207ENST00000511303 SERP1Q9Y6X1 66 aa6.05□□□□□ -1.44
SGCA-207ENST00000511303 H1FX-AS1Q4G0G2 97 aa6.01□□□□□ -1.45
SGCA-207ENST00000511303 COA5Q86WW8 74 aa6□□□□□ -1.45
SGCA-207ENST00000511303 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
SGCA-207ENST00000511303 SPTSSBQ8NFR3 76 aa5.95□□□□□ -1.46
SGCA-207ENST00000511303 KRTAP19-2Q3LHN2 52 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms