RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 FRYLO94915 3013 aa4.57□□□□□ -1.68
PDE6A-202ENST00000508173 MAP1AP78559 2803 aaPredicted RBP4.57□□□□□ -1.68
PDE6A-202ENST00000508173 HIVEP1P15822 2718 aa4.56□□□□□ -1.68
PDE6A-202ENST00000508173 KRTAP7-1Q8IUC3 87 aa4.56□□□□□ -1.68
PDE6A-202ENST00000508173 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
PDE6A-202ENST00000508173 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
PDE6A-202ENST00000508173 ZFHX4Q86UP3 3567 aa4.53□□□□□ -1.68
PDE6A-202ENST00000508173 NBEAQ8NFP9 2946 aa4.53□□□□□ -1.68
PDE6A-202ENST00000508173 MGAQ8IWI9 3026 aa4.53□□□□□ -1.68
PDE6A-202ENST00000508173 UBR5O95071 2799 aaPredicted RBP4.52□□□□□ -1.69
PDE6A-202ENST00000508173 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
PDE6A-202ENST00000508173 KALRNO60229 2985 aa4.52□□□□□ -1.69
PDE6A-202ENST00000508173 EYSQ5T1H1 3165 aa4.51□□□□□ -1.69
PDE6A-202ENST00000508173 DSPP15924 2871 aaKnown RBP4.51□□□□□ -1.69
PDE6A-202ENST00000508173 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
PDE6A-202ENST00000508173 CSMD1Q96PZ7 3565 aa4.49□□□□□ -1.69
PDE6A-202ENST00000508173 ZZEF1O43149 2961 aa4.49□□□□□ -1.69
PDE6A-202ENST00000508173 ASPMQ8IZT6 3477 aa4.47□□□□□ -1.69
PDE6A-202ENST00000508173 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
PDE6A-202ENST00000508173 CFAP47Q6ZTR5 3102 aa4.45□□□□□ -1.7
PDE6A-202ENST00000508173 LRBAP50851 2863 aa4.45□□□□□ -1.7
PDE6A-202ENST00000508173 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
PDE6A-202ENST00000508173 P0C880 135 aa4.43□□□□□ -1.7
PDE6A-202ENST00000508173 DMDP11532 3685 aa4.43□□□□□ -1.7
PDE6A-202ENST00000508173 BOD1L1Q8NFC6 3051 aa4.42□□□□□ -1.7
PDE6A-202ENST00000508173 SMG1Q96Q15 3661 aaKnown RBP4.4□□□□□ -1.71
PDE6A-202ENST00000508173 KRTAP13-2Q52LG2 175 aa4.4□□□□□ -1.71
PDE6A-202ENST00000508173 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
PDE6A-202ENST00000508173 TPRXLQ17RH7 258 aa4.37□□□□□ -1.71
PDE6A-202ENST00000508173 LAMA5O15230 3695 aa4.36□□□□□ -1.71
PDE6A-202ENST00000508173 ASH1LQ9NR48 2969 aaKnown RBP4.36□□□□□ -1.71
PDE6A-202ENST00000508173 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
PDE6A-202ENST00000508173 ADGRG4Q8IZF6 3080 aa4.35□□□□□ -1.71
PDE6A-202ENST00000508173 DMXL2Q8TDJ6 3036 aa4.34□□□□□ -1.71
PDE6A-202ENST00000508173 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
PDE6A-202ENST00000508173 XP32Q5T750 250 aa4.32□□□□□ -1.72
PDE6A-202ENST00000508173 APCP25054 2843 aa4.32□□□□□ -1.72
PDE6A-202ENST00000508173 NBEAL2Q6ZNJ1 2754 aa4.32□□□□□ -1.72
PDE6A-202ENST00000508173 TACC2O95359 2948 aa4.31□□□□□ -1.72
PDE6A-202ENST00000508173 UTP20O75691 2785 aaKnown RBP4.3□□□□□ -1.72
PDE6A-202ENST00000508173 ITPR1Q14643 2758 aa4.3□□□□□ -1.72
PDE6A-202ENST00000508173 H0YAA0 97 aa4.3□□□□□ -1.72
PDE6A-202ENST00000508173 LOC400499M0QZD8 3231 aa4.29□□□□□ -1.72
PDE6A-202ENST00000508173 SVEP1Q4LDE5 3571 aa4.28□□□□□ -1.72
PDE6A-202ENST00000508173 SPENQ96T58 3664 aaKnown RBP4.24□□□□□ -1.73
PDE6A-202ENST00000508173 ATMQ13315 3056 aa4.22□□□□□ -1.73
PDE6A-202ENST00000508173 RELNP78509 3460 aa4.22□□□□□ -1.73
PDE6A-202ENST00000508173 CRYBG3Q68DQ2 2970 aa4.22□□□□□ -1.73
PDE6A-202ENST00000508173 TENM2Q9NT68 2774 aa4.18□□□□□ -1.74
PDE6A-202ENST00000508173 DMXL1Q9Y485 3027 aa4.17□□□□□ -1.74
PDE6A-202ENST00000508173 KRTAP13-3Q3SY46 172 aa4.14□□□□□ -1.75
PDE6A-202ENST00000508173 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
PDE6A-202ENST00000508173 COL12A1Q99715 3063 aa4.13□□□□□ -1.75
PDE6A-202ENST00000508173 TENM3Q9P273 2699 aa4.12□□□□□ -1.75
PDE6A-202ENST00000508173 HRNRQ86YZ3 2850 aaPredicted RBP4.11□□□□□ -1.75
PDE6A-202ENST00000508173 NIPBLQ6KC79 2804 aaeCLIP4.11□□□□□ -1.75
PDE6A-202ENST00000508173 TENM1Q9UKZ4 2725 aa4.09□□□□□ -1.75
PDE6A-202ENST00000508173 PDZD2O15018 2839 aa4.09□□□□□ -1.75
PDE6A-202ENST00000508173 FBN3Q75N90 2809 aa4.09□□□□□ -1.76
PDE6A-202ENST00000508173 CUBNO60494 3623 aa4.05□□□□□ -1.76
PDE6A-202ENST00000508173 BSNQ9UPA5 3926 aa4.04□□□□□ -1.76
PDE6A-202ENST00000508173 CSMD2Q7Z408 3487 aa4.04□□□□□ -1.76
PDE6A-202ENST00000508173 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
PDE6A-202ENST00000508173 MUC3AQ02505 3323 aa4□□□□□ -1.77
PDE6A-202ENST00000508173 MXRA5Q9NR99 2828 aa3.99□□□□□ -1.77
PDE6A-202ENST00000508173 NBPF19A0A087WUL8 3843 aa3.98□□□□□ -1.77
PDE6A-202ENST00000508173 VPS13CQ709C8 3753 aa3.97□□□□□ -1.77
PDE6A-202ENST00000508173 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
PDE6A-202ENST00000508173 FBN2P35556 2912 aa3.97□□□□□ -1.77
PDE6A-202ENST00000508173 CELSR2Q9HCU4 2923 aa3.97□□□□□ -1.77
PDE6A-202ENST00000508173 NF1P21359 2839 aa3.96□□□□□ -1.78
PDE6A-202ENST00000508173 OTOGQ6ZRI0 2925 aa3.95□□□□□ -1.78
PDE6A-202ENST00000508173 CELSR1Q9NYQ6 3014 aa3.95□□□□□ -1.78
PDE6A-202ENST00000508173 ANK3Q12955 4377 aaKnown RBP3.94□□□□□ -1.78
PDE6A-202ENST00000508173 AKAP9Q99996 3911 aa3.92□□□□□ -1.78
PDE6A-202ENST00000508173 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.78
PDE6A-202ENST00000508173 ZANQ9Y493 2812 aa3.89□□□□□ -1.79
PDE6A-202ENST00000508173 PKD1L1Q8TDX9 2849 aa3.89□□□□□ -1.79
PDE6A-202ENST00000508173 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
PDE6A-202ENST00000508173 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
PDE6A-202ENST00000508173 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
PDE6A-202ENST00000508173 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
PDE6A-202ENST00000508173 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
PDE6A-202ENST00000508173 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
PDE6A-202ENST00000508173 INE1O15225 51 aa3.81□□□□□ -1.8
PDE6A-202ENST00000508173 TGP01266 2768 aa3.8□□□□□ -1.8
PDE6A-202ENST00000508173 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
PDE6A-202ENST00000508173 HUWE1Q7Z6Z7 4374 aaKnown RBP3.78□□□□□ -1.8
PDE6A-202ENST00000508173 FBN1P35555 2871 aaKnown RBP3.78□□□□□ -1.8
PDE6A-202ENST00000508173 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
PDE6A-202ENST00000508173 CSMD3Q7Z407 3707 aa3.76□□□□□ -1.81
PDE6A-202ENST00000508173 TRRAPQ9Y4A5 3859 aa3.74□□□□□ -1.81
PDE6A-202ENST00000508173 VWFP04275 2813 aa3.7□□□□□ -1.82
PDE6A-202ENST00000508173 ZNF469Q96JG9 3925 aaPredicted RBP3.69□□□□□ -1.82
PDE6A-202ENST00000508173 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
PDE6A-202ENST00000508173 KRTAP10-4P60372 401 aaPredicted RBP3.67□□□□□ -1.82
PDE6A-202ENST00000508173 KRTAP3-2Q9BYR7 98 aa3.65□□□□□ -1.83
PDE6A-202ENST00000508173 KRTAP3-3Q9BYR6 98 aa3.65□□□□□ -1.83
PDE6A-202ENST00000508173 DNAH10Q8IVF4 4471 aa3.64□□□□□ -1.83
PDE6A-202ENST00000508173 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms