RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 DDX60Q8IY21 1712 aaKnown RBP0.87□□□□□ -2.27
LINC01088-203ENST00000507476 HYDINQ4G0P3 5121 aa0.87□□□□□ -2.27
LINC01088-203ENST00000507476 DCHS1Q96JQ0 3298 aa0.86□□□□□ -2.27
LINC01088-203ENST00000507476 RELNP78509 3460 aa0.86□□□□□ -2.27
LINC01088-203ENST00000507476 DEFB106AQ8N104 65 aa0.86□□□□□ -2.27
LINC01088-203ENST00000507476 XIRP2A4UGR9 3374 aa0.86□□□□□ -2.27
LINC01088-203ENST00000507476 CSPG4Q6UVK1 2322 aa0.86□□□□□ -2.27
LINC01088-203ENST00000507476 TOP2AP11388 1531 aaKnown RBP0.85□□□□□ -2.27
LINC01088-203ENST00000507476 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
LINC01088-203ENST00000507476 CFAP46Q8IYW2 2715 aa0.85□□□□□ -2.27
LINC01088-203ENST00000507476 CDH23Q9H251 3354 aa0.84□□□□□ -2.27
LINC01088-203ENST00000507476 EPPK1P58107 5090 aaKnown RBP0.84□□□□□ -2.27
LINC01088-203ENST00000507476 NBEAL2Q6ZNJ1 2754 aa0.84□□□□□ -2.27
LINC01088-203ENST00000507476 ZFYVE26Q68DK2 2539 aa0.84□□□□□ -2.28
LINC01088-203ENST00000507476 DSPP15924 2871 aaKnown RBP0.84□□□□□ -2.28
LINC01088-203ENST00000507476 MUC2Q02817 5179 aa0.84□□□□□ -2.28
LINC01088-203ENST00000507476 LAMA3Q16787 3333 aa0.83□□□□□ -2.28
LINC01088-203ENST00000507476 SPTBN4Q9H254 2564 aa0.83□□□□□ -2.28
LINC01088-203ENST00000507476 TEX15Q9BXT5 2789 aa0.83□□□□□ -2.28
LINC01088-203ENST00000507476 PRLHP81277 87 aa0.83□□□□□ -2.28
LINC01088-203ENST00000507476 OTOGQ6ZRI0 2925 aa0.83□□□□□ -2.28
LINC01088-203ENST00000507476 MYO9AB2RTY4 2548 aa0.83□□□□□ -2.28
LINC01088-203ENST00000507476 SETD2Q9BYW2 2564 aaPredicted RBP0.83□□□□□ -2.28
LINC01088-203ENST00000507476 KMT2CQ8NEZ4 4911 aaKnown RBP0.82□□□□□ -2.28
LINC01088-203ENST00000507476 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
LINC01088-203ENST00000507476 NCOR1O75376 2440 aa0.82□□□□□ -2.28
LINC01088-203ENST00000507476 S4R3F8 94 aa0.82□□□□□ -2.28
LINC01088-203ENST00000507476 BOD1L1Q8NFC6 3051 aa0.82□□□□□ -2.28
LINC01088-203ENST00000507476 IGF2RP11717 2491 aa0.81□□□□□ -2.28
LINC01088-203ENST00000507476 UBR5O95071 2799 aaPredicted RBP0.81□□□□□ -2.28
LINC01088-203ENST00000507476 CSMD1Q96PZ7 3565 aa0.81□□□□□ -2.28
LINC01088-203ENST00000507476 FRYQ5TBA9 3013 aa0.81□□□□□ -2.28
LINC01088-203ENST00000507476 LOC400499M0QZD8 3231 aa0.8□□□□□ -2.28
LINC01088-203ENST00000507476 NBEAQ8NFP9 2946 aa0.8□□□□□ -2.28
LINC01088-203ENST00000507476 CRYBG3Q68DQ2 2970 aa0.8□□□□□ -2.28
LINC01088-203ENST00000507476 DNAH14Q0VDD8 3507 aa0.8□□□□□ -2.28
LINC01088-203ENST00000507476 RYR2Q92736 4967 aa0.8□□□□□ -2.28
LINC01088-203ENST00000507476 VPS13AQ96RL7 3174 aa0.8□□□□□ -2.28
LINC01088-203ENST00000507476 SMG1Q96Q15 3661 aaKnown RBP0.79□□□□□ -2.28
LINC01088-203ENST00000507476 ACACBO00763 2458 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 NCOR2Q9Y618 2525 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 COL12A1Q99715 3063 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 FLNCQ14315 2725 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 MACF1Q9UPN3 7388 aaKnown RBP0.79□□□□□ -2.28
LINC01088-203ENST00000507476 PDZD2O15018 2839 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 MAP1BP46821 2468 aaKnown RBP0.79□□□□□ -2.28
LINC01088-203ENST00000507476 CCDC168Q8NDH2 2452 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 ATP7AQ04656 1500 aa0.79□□□□□ -2.28
LINC01088-203ENST00000507476 FLNAP21333 2647 aaKnown RBP0.78□□□□□ -2.28
LINC01088-203ENST00000507476 IGSF10Q6WRI0 2623 aa0.78□□□□□ -2.28
LINC01088-203ENST00000507476 NBEAL1Q6ZS30 2694 aa0.78□□□□□ -2.28
LINC01088-203ENST00000507476 NOP10Q9NPE3 64 aaKnown RBP0.78□□□□□ -2.28
LINC01088-203ENST00000507476 CELSR1Q9NYQ6 3014 aa0.78□□□□□ -2.28
LINC01088-203ENST00000507476 DMXL1Q9Y485 3027 aa0.78□□□□□ -2.28
LINC01088-203ENST00000507476 FREM2Q5SZK8 3169 aa0.78□□□□□ -2.28
LINC01088-203ENST00000507476 SPG11Q96JI7 2443 aa0.78□□□□□ -2.28
LINC01088-203ENST00000507476 HERC2O95714 4834 aa0.78□□□□□ -2.29
LINC01088-203ENST00000507476 NF1P21359 2839 aa0.78□□□□□ -2.29
LINC01088-203ENST00000507476 ZZEF1O43149 2961 aa0.78□□□□□ -2.29
LINC01088-203ENST00000507476 PCNX1Q96RV3 2341 aa0.77□□□□□ -2.29
LINC01088-203ENST00000507476 EP300Q09472 2414 aaPredicted RBP0.77□□□□□ -2.29
LINC01088-203ENST00000507476 ANKHD1Q8IWZ3 2542 aaKnown RBP0.77□□□□□ -2.29
LINC01088-203ENST00000507476 MROH2BQ7Z745 1585 aa0.77□□□□□ -2.29
LINC01088-203ENST00000507476 ABCA13Q86UQ4 5058 aa0.77□□□□□ -2.29
LINC01088-203ENST00000507476 PKD1L1Q8TDX9 2849 aa0.77□□□□□ -2.29
LINC01088-203ENST00000507476 MYO15AQ9UKN7 3530 aa0.77□□□□□ -2.29
LINC01088-203ENST00000507476 HERC1Q15751 4861 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 STAB1Q9NY15 2570 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 TLN1Q9Y490 2541 aaKnown RBP0.76□□□□□ -2.29
LINC01088-203ENST00000507476 CEP250Q9BV73 2442 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 NFAT5O94916 1531 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 TNXBP22105 4242 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 BSNQ9UPA5 3926 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 PRM1P04553 51 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 WFDC10BQ8IUB3 73 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 SMIM2Q9BVW6 85 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 KAAG1Q9UBP8 84 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 WDR87Q6ZQQ6 2873 aa0.76□□□□□ -2.29
LINC01088-203ENST00000507476 LRRK2Q5S007 2527 aa0.75□□□□□ -2.29
LINC01088-203ENST00000507476 SPTAN1Q13813 2472 aaKnown RBP0.75□□□□□ -2.29
LINC01088-203ENST00000507476 FRYLO94915 3013 aa0.75□□□□□ -2.29
LINC01088-203ENST00000507476 CREBBPQ92793 2442 aa0.75□□□□□ -2.29
LINC01088-203ENST00000507476 AKAP13Q12802 2813 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 CEP290O15078 2479 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 ZANQ9Y493 2812 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 TFF3Q07654 80 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 WDFY3Q8IZQ1 3526 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 FSIP2Q5CZC0 6907 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 PRRC2CQ9Y520 2896 aaKnown RBP0.74□□□□□ -2.29
LINC01088-203ENST00000507476 ITPR1Q14643 2758 aa0.74□□□□□ -2.29
LINC01088-203ENST00000507476 DMDP11532 3685 aa0.73□□□□□ -2.29
LINC01088-203ENST00000507476 SPENQ96T58 3664 aaKnown RBP0.73□□□□□ -2.29
LINC01088-203ENST00000507476 NBPF19A0A087WUL8 3843 aa0.73□□□□□ -2.29
LINC01088-203ENST00000507476 UTP20O75691 2785 aaKnown RBP0.73□□□□□ -2.29
LINC01088-203ENST00000507476 LRBAP50851 2863 aa0.72□□□□□ -2.29
LINC01088-203ENST00000507476 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
LINC01088-203ENST00000507476 SAMD9LQ8IVG5 1584 aa0.72□□□□□ -2.29
LINC01088-203ENST00000507476 CEP295Q9C0D2 2601 aa0.72□□□□□ -2.29
LINC01088-203ENST00000507476 TRIOO75962 3097 aa0.72□□□□□ -2.29
LINC01088-203ENST00000507476 PRKDCP78527 4128 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms