RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 NBEAL2Q6ZNJ1 2754 aa2.35□□□□□ -2.03
PALMD-202ENST00000496843 MKI67P46013 3256 aaKnown RBP2.34□□□□□ -2.03
PALMD-202ENST00000496843 SPTBN5Q9NRC6 3674 aaKnown RBP2.34□□□□□ -2.04
PALMD-202ENST00000496843 MT3P25713 68 aa2.33□□□□□ -2.04
PALMD-202ENST00000496843 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
PALMD-202ENST00000496843 CENPFP49454 3210 aa2.33□□□□□ -2.04
PALMD-202ENST00000496843 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
PALMD-202ENST00000496843 REV3LO60673 3130 aa2.31□□□□□ -2.04
PALMD-202ENST00000496843 TRIOO75962 3097 aa2.31□□□□□ -2.04
PALMD-202ENST00000496843 PRUNE2Q8WUY3 3088 aa2.31□□□□□ -2.04
PALMD-202ENST00000496843 TEX15Q9BXT5 2789 aa2.31□□□□□ -2.04
PALMD-202ENST00000496843 TENM1Q9UKZ4 2725 aa2.31□□□□□ -2.04
PALMD-202ENST00000496843 KRTAP10-4P60372 401 aaPredicted RBP2.31□□□□□ -2.04
PALMD-202ENST00000496843 MUC3AQ02505 3323 aa2.3□□□□□ -2.04
PALMD-202ENST00000496843 SZT2Q5T011 3432 aa2.3□□□□□ -2.04
PALMD-202ENST00000496843 KRTAP19-4Q3LI73 84 aa2.3□□□□□ -2.04
PALMD-202ENST00000496843 RANBP2P49792 3224 aaKnown RBP2.29□□□□□ -2.04
PALMD-202ENST00000496843 LAMA2P24043 3122 aaKnown RBP2.29□□□□□ -2.04
PALMD-202ENST00000496843 COL6A3P12111 3177 aa2.29□□□□□ -2.04
PALMD-202ENST00000496843 ZNF292O60281 2723 aa2.28□□□□□ -2.04
PALMD-202ENST00000496843 TRANK1O15050 2925 aa2.28□□□□□ -2.04
PALMD-202ENST00000496843 CHD9Q3L8U1 2897 aa2.28□□□□□ -2.04
PALMD-202ENST00000496843 TENM2Q9NT68 2774 aa2.28□□□□□ -2.04
PALMD-202ENST00000496843 EYSQ5T1H1 3165 aa2.27□□□□□ -2.05
PALMD-202ENST00000496843 APCP25054 2843 aa2.26□□□□□ -2.05
PALMD-202ENST00000496843 UNC80Q8N2C7 3258 aa2.25□□□□□ -2.05
PALMD-202ENST00000496843 DNAH12Q6ZR08 3092 aa2.25□□□□□ -2.05
PALMD-202ENST00000496843 LAMA3Q16787 3333 aa2.25□□□□□ -2.05
PALMD-202ENST00000496843 CHD7Q9P2D1 2997 aa2.24□□□□□ -2.05
PALMD-202ENST00000496843 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
PALMD-202ENST00000496843 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
PALMD-202ENST00000496843 SRRM2Q9UQ35 2752 aaKnown RBP2.23□□□□□ -2.05
PALMD-202ENST00000496843 HIVEP1P15822 2718 aa2.23□□□□□ -2.05
PALMD-202ENST00000496843 LRBAP50851 2863 aa2.22□□□□□ -2.05
PALMD-202ENST00000496843 PDZD2O15018 2839 aa2.22□□□□□ -2.05
PALMD-202ENST00000496843 CDH23Q9H251 3354 aa2.22□□□□□ -2.05
PALMD-202ENST00000496843 VCANP13611 3396 aa2.21□□□□□ -2.06
PALMD-202ENST00000496843 XIRP2A4UGR9 3374 aa2.2□□□□□ -2.06
PALMD-202ENST00000496843 CELSR2Q9HCU4 2923 aa2.2□□□□□ -2.06
PALMD-202ENST00000496843 FLNCQ14315 2725 aa2.15□□□□□ -2.07
PALMD-202ENST00000496843 DMDP11532 3685 aa2.14□□□□□ -2.07
PALMD-202ENST00000496843 USP34Q70CQ2 3546 aa2.14□□□□□ -2.07
PALMD-202ENST00000496843 DSPP15924 2871 aaKnown RBP2.14□□□□□ -2.07
PALMD-202ENST00000496843 DCHS1Q96JQ0 3298 aa2.14□□□□□ -2.07
PALMD-202ENST00000496843 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
PALMD-202ENST00000496843 WDFY4Q6ZS81 3184 aa2.12□□□□□ -2.07
PALMD-202ENST00000496843 MEGF8Q7Z7M0 2845 aa2.11□□□□□ -2.07
PALMD-202ENST00000496843 FRYLO94915 3013 aa2.11□□□□□ -2.07
PALMD-202ENST00000496843 KALRNO60229 2985 aa2.11□□□□□ -2.07
PALMD-202ENST00000496843 MYO15AQ9UKN7 3530 aa2.11□□□□□ -2.07
PALMD-202ENST00000496843 ZANQ9Y493 2812 aa2.11□□□□□ -2.07
PALMD-202ENST00000496843 DMXL1Q9Y485 3027 aa2.09□□□□□ -2.08
PALMD-202ENST00000496843 ZFHX4Q86UP3 3567 aa2.08□□□□□ -2.08
PALMD-202ENST00000496843 VPS13AQ96RL7 3174 aa2.08□□□□□ -2.08
PALMD-202ENST00000496843 WDFY3Q8IZQ1 3526 aa2.08□□□□□ -2.08
PALMD-202ENST00000496843 C5orf42Q9H799 3197 aa2.08□□□□□ -2.08
PALMD-202ENST00000496843 KRTAP8-1Q8IUC2 63 aa2.07□□□□□ -2.08
PALMD-202ENST00000496843 DNAH14Q0VDD8 3507 aa2.07□□□□□ -2.08
PALMD-202ENST00000496843 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
PALMD-202ENST00000496843 ZFHX3Q15911 3703 aa2.07□□□□□ -2.08
PALMD-202ENST00000496843 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
PALMD-202ENST00000496843 MGAQ8IWI9 3026 aa2.05□□□□□ -2.08
PALMD-202ENST00000496843 LCE2BO14633 110 aa2.05□□□□□ -2.08
PALMD-202ENST00000496843 LCE2CQ5TA81 110 aa2.05□□□□□ -2.08
PALMD-202ENST00000496843 CFAP54Q96N23 3096 aa2.05□□□□□ -2.08
PALMD-202ENST00000496843 ZZEF1O43149 2961 aa2.04□□□□□ -2.08
PALMD-202ENST00000496843 SPEGQ15772 3267 aa2.04□□□□□ -2.08
PALMD-202ENST00000496843 LORP23490 312 aaPredicted RBP2.04□□□□□ -2.08
PALMD-202ENST00000496843 KRTAP4-5Q9BYR2 181 aa2.03□□□□□ -2.08
PALMD-202ENST00000496843 NF1P21359 2839 aa2.02□□□□□ -2.09
PALMD-202ENST00000496843 LAMA1P25391 3075 aa2.02□□□□□ -2.09
PALMD-202ENST00000496843 NBEAQ8NFP9 2946 aa2.02□□□□□ -2.09
PALMD-202ENST00000496843 DNAH6Q9C0G6 4158 aa2.02□□□□□ -2.09
PALMD-202ENST00000496843 ASPMQ8IZT6 3477 aa2.01□□□□□ -2.09
PALMD-202ENST00000496843 KRTAP21-3Q3LHN1 58 aa2□□□□□ -2.09
PALMD-202ENST00000496843 CFAP47Q6ZTR5 3102 aa2□□□□□ -2.09
PALMD-202ENST00000496843 NIPBLQ6KC79 2804 aaeCLIP1.99□□□□□ -2.09
PALMD-202ENST00000496843 BSNQ9UPA5 3926 aa1.98□□□□□ -2.09
PALMD-202ENST00000496843 FRYQ5TBA9 3013 aa1.98□□□□□ -2.09
PALMD-202ENST00000496843 LOC400499M0QZD8 3231 aa1.97□□□□□ -2.09
PALMD-202ENST00000496843 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
PALMD-202ENST00000496843 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
PALMD-202ENST00000496843 LAMA5O15230 3695 aa1.96□□□□□ -2.1
PALMD-202ENST00000496843 FREM2Q5SZK8 3169 aa1.96□□□□□ -2.1
PALMD-202ENST00000496843 DMXL2Q8TDJ6 3036 aa1.96□□□□□ -2.1
PALMD-202ENST00000496843 TENM4Q6N022 2769 aa1.95□□□□□ -2.1
PALMD-202ENST00000496843 SMG1Q96Q15 3661 aaKnown RBP1.95□□□□□ -2.1
PALMD-202ENST00000496843 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
PALMD-202ENST00000496843 LCE3BQ5TA77 95 aa1.95□□□□□ -2.1
PALMD-202ENST00000496843 SPENQ96T58 3664 aaKnown RBP1.95□□□□□ -2.1
PALMD-202ENST00000496843 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
PALMD-202ENST00000496843 LCE2AQ5TA79 106 aaPredicted RBP1.94□□□□□ -2.1
PALMD-202ENST00000496843 ATMQ13315 3056 aa1.92□□□□□ -2.1
PALMD-202ENST00000496843 OTOGQ6ZRI0 2925 aa1.91□□□□□ -2.1
PALMD-202ENST00000496843 FBN3Q75N90 2809 aa1.89□□□□□ -2.11
PALMD-202ENST00000496843 COL12A1Q99715 3063 aa1.89□□□□□ -2.11
PALMD-202ENST00000496843 HRNRQ86YZ3 2850 aaPredicted RBP1.89□□□□□ -2.11
PALMD-202ENST00000496843 PRM1P04553 51 aa1.88□□□□□ -2.11
PALMD-202ENST00000496843 CRYBG3Q68DQ2 2970 aa1.88□□□□□ -2.11
PALMD-202ENST00000496843 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms