RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 FAM186AA6NE01 2351 aa1.38□□□□□ -2.19
ZNF561-219ENST00000494276 PRUNE2Q8WUY3 3088 aa1.38□□□□□ -2.19
ZNF561-219ENST00000494276 CRYBG3Q68DQ2 2970 aa1.37□□□□□ -2.19
ZNF561-219ENST00000494276 NAV2Q8IVL1 2488 aa1.37□□□□□ -2.19
ZNF561-219ENST00000494276 NBEAQ8NFP9 2946 aa1.37□□□□□ -2.19
ZNF561-219ENST00000494276 ITPR1Q14643 2758 aa1.36□□□□□ -2.19
ZNF561-219ENST00000494276 ANKHD1Q8IWZ3 2542 aaKnown RBP1.36□□□□□ -2.19
ZNF561-219ENST00000494276 MAP1AP78559 2803 aaPredicted RBP1.36□□□□□ -2.19
ZNF561-219ENST00000494276 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
ZNF561-219ENST00000494276 TTC28Q96AY4 2481 aa1.36□□□□□ -2.19
ZNF561-219ENST00000494276 U3KQA8 63 aa1.36□□□□□ -2.19
ZNF561-219ENST00000494276 ZNF292O60281 2723 aa1.35□□□□□ -2.19
ZNF561-219ENST00000494276 HECTD1Q9ULT8 2610 aa1.35□□□□□ -2.19
ZNF561-219ENST00000494276 AKAP13Q12802 2813 aa1.35□□□□□ -2.19
ZNF561-219ENST00000494276 SPG11Q96JI7 2443 aa1.35□□□□□ -2.19
ZNF561-219ENST00000494276 RP1L1Q8IWN7 2480 aaPredicted RBP1.34□□□□□ -2.19
ZNF561-219ENST00000494276 CELSR1Q9NYQ6 3014 aa1.34□□□□□ -2.19
ZNF561-219ENST00000494276 ZZEF1O43149 2961 aa1.34□□□□□ -2.19
ZNF561-219ENST00000494276 FRYLO94915 3013 aa1.34□□□□□ -2.19
ZNF561-219ENST00000494276 C9orf92A6NGG3 77 aa1.34□□□□□ -2.19
ZNF561-219ENST00000494276 RPS29P62273 56 aaKnown RBP1.34□□□□□ -2.19
ZNF561-219ENST00000494276 MEGF8Q7Z7M0 2845 aa1.32□□□□□ -2.2
ZNF561-219ENST00000494276 SETD2Q9BYW2 2564 aaPredicted RBP1.32□□□□□ -2.2
ZNF561-219ENST00000494276 SONP18583 2426 aaKnown RBP1.31□□□□□ -2.2
ZNF561-219ENST00000494276 LRBAP50851 2863 aa1.31□□□□□ -2.2
ZNF561-219ENST00000494276 DEFB4AO15263 64 aa1.31□□□□□ -2.2
ZNF561-219ENST00000494276 KRTAP21-3Q3LHN1 58 aa1.31□□□□□ -2.2
ZNF561-219ENST00000494276 CHD9Q3L8U1 2897 aa1.31□□□□□ -2.2
ZNF561-219ENST00000494276 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
ZNF561-219ENST00000494276 RIF1Q5UIP0 2472 aaKnown RBP1.3□□□□□ -2.2
ZNF561-219ENST00000494276 NCOR2Q9Y618 2525 aa1.3□□□□□ -2.2
ZNF561-219ENST00000494276 LRRK2Q5S007 2527 aa1.29□□□□□ -2.2
ZNF561-219ENST00000494276 FRYQ5TBA9 3013 aa1.29□□□□□ -2.2
ZNF561-219ENST00000494276 PTPN13Q12923 2485 aa1.28□□□□□ -2.2
ZNF561-219ENST00000494276 CFAP54Q96N23 3096 aa1.28□□□□□ -2.2
ZNF561-219ENST00000494276 RANBP2P49792 3224 aaKnown RBP1.28□□□□□ -2.2
ZNF561-219ENST00000494276 M0R2T5 61 aa1.28□□□□□ -2.2
ZNF561-219ENST00000494276 HIVEP3Q5T1R4 2406 aa1.28□□□□□ -2.2
ZNF561-219ENST00000494276 BDP1A6H8Y1 2624 aa1.28□□□□□ -2.2
ZNF561-219ENST00000494276 DMXL1Q9Y485 3027 aa1.27□□□□□ -2.21
ZNF561-219ENST00000494276 C5orf42Q9H799 3197 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 TRIOO75962 3097 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 USP24Q9UPU5 2620 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 DCHS2Q6V1P9 2916 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 NF1P21359 2839 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 ITPR3Q14573 2671 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 ACANP16112 2415 aa1.26□□□□□ -2.21
ZNF561-219ENST00000494276 SRCAPQ6ZRS2 3230 aa1.25□□□□□ -2.21
ZNF561-219ENST00000494276 BOD1L1Q8NFC6 3051 aa1.25□□□□□ -2.21
ZNF561-219ENST00000494276 VPS13AQ96RL7 3174 aa1.25□□□□□ -2.21
ZNF561-219ENST00000494276 EPG5Q9HCE0 2579 aa1.25□□□□□ -2.21
ZNF561-219ENST00000494276 KALRNO60229 2985 aa1.25□□□□□ -2.21
ZNF561-219ENST00000494276 CFAP46Q8IYW2 2715 aa1.24□□□□□ -2.21
ZNF561-219ENST00000494276 HELZ2Q9BYK8 2649 aaKnown RBP1.24□□□□□ -2.21
ZNF561-219ENST00000494276 USP9YO00507 2555 aaPredicted RBP1.24□□□□□ -2.21
ZNF561-219ENST00000494276 DNAH12Q6ZR08 3092 aa1.24□□□□□ -2.21
ZNF561-219ENST00000494276 ATRQ13535 2644 aa1.24□□□□□ -2.21
ZNF561-219ENST00000494276 PIEZO1Q92508 2521 aa1.24□□□□□ -2.21
ZNF561-219ENST00000494276 HTTP42858 3142 aa1.23□□□□□ -2.21
ZNF561-219ENST00000494276 CENPEQ02224 2701 aa1.23□□□□□ -2.21
ZNF561-219ENST00000494276 WDFY4Q6ZS81 3184 aa1.22□□□□□ -2.21
ZNF561-219ENST00000494276 POLQO75417 2590 aa1.22□□□□□ -2.21
ZNF561-219ENST00000494276 COL7A1Q02388 2944 aa1.22□□□□□ -2.21
ZNF561-219ENST00000494276 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
ZNF561-219ENST00000494276 NIPBLQ6KC79 2804 aaeCLIP1.22□□□□□ -2.21
ZNF561-219ENST00000494276 ATMQ13315 3056 aa1.21□□□□□ -2.21
ZNF561-219ENST00000494276 COL12A1Q99715 3063 aa1.21□□□□□ -2.21
ZNF561-219ENST00000494276 UTP20O75691 2785 aaKnown RBP1.21□□□□□ -2.22
ZNF561-219ENST00000494276 CACNA1AO00555 2505 aa1.21□□□□□ -2.22
ZNF561-219ENST00000494276 SPTAN1Q13813 2472 aaKnown RBP1.21□□□□□ -2.22
ZNF561-219ENST00000494276 FLNCQ14315 2725 aa1.2□□□□□ -2.22
ZNF561-219ENST00000494276 APCP25054 2843 aa1.2□□□□□ -2.22
ZNF561-219ENST00000494276 CFAP47Q6ZTR5 3102 aa1.2□□□□□ -2.22
ZNF561-219ENST00000494276 TGP01266 2768 aa1.19□□□□□ -2.22
ZNF561-219ENST00000494276 CHD8Q9HCK8 2581 aa1.19□□□□□ -2.22
ZNF561-219ENST00000494276 TLN1Q9Y490 2541 aaKnown RBP1.19□□□□□ -2.22
ZNF561-219ENST00000494276 TENM4Q6N022 2769 aa1.19□□□□□ -2.22
ZNF561-219ENST00000494276 USP9XQ93008 2570 aaPredicted RBP1.19□□□□□ -2.22
ZNF561-219ENST00000494276 MKI67P46013 3256 aaKnown RBP1.19□□□□□ -2.22
ZNF561-219ENST00000494276 TEX15Q9BXT5 2789 aa1.19□□□□□ -2.22
ZNF561-219ENST00000494276 DOPEY1Q5JWR5 2465 aa1.18□□□□□ -2.22
ZNF561-219ENST00000494276 MTORP42345 2549 aa1.18□□□□□ -2.22
ZNF561-219ENST00000494276 LAMA1P25391 3075 aa1.18□□□□□ -2.22
ZNF561-219ENST00000494276 GOLGB1Q14789 3259 aaKnown RBP1.18□□□□□ -2.22
ZNF561-219ENST00000494276 PDZD2O15018 2839 aa1.17□□□□□ -2.22
ZNF561-219ENST00000494276 SMR3AQ99954 134 aa1.17□□□□□ -2.22
ZNF561-219ENST00000494276 ZFHX4Q86UP3 3567 aa1.17□□□□□ -2.22
ZNF561-219ENST00000494276 VPS13DQ5THJ4 4388 aa1.17□□□□□ -2.22
ZNF561-219ENST00000494276 DMXL2Q8TDJ6 3036 aa1.16□□□□□ -2.22
ZNF561-219ENST00000494276 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
ZNF561-219ENST00000494276 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
ZNF561-219ENST00000494276 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
ZNF561-219ENST00000494276 GCN1Q92616 2671 aaKnown RBP1.16□□□□□ -2.22
ZNF561-219ENST00000494276 AKAP9Q99996 3911 aa1.16□□□□□ -2.22
ZNF561-219ENST00000494276 KRTAP8-1Q8IUC2 63 aa1.15□□□□□ -2.23
ZNF561-219ENST00000494276 EP400Q96L91 3159 aa1.15□□□□□ -2.23
ZNF561-219ENST00000494276 ZANQ9Y493 2812 aa1.14□□□□□ -2.23
ZNF561-219ENST00000494276 ITPR2Q14571 2701 aa1.14□□□□□ -2.23
ZNF561-219ENST00000494276 TACC2O95359 2948 aa1.13□□□□□ -2.23
ZNF561-219ENST00000494276 FREM2Q5SZK8 3169 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms