RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
ZNF561-219ENST00000494276 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
ZNF561-219ENST00000494276 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
ZNF561-219ENST00000494276 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
ZNF561-219ENST00000494276 FOXD1Q16676 465 aa20.81■□□□□ 0.92
ZNF561-219ENST00000494276 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
ZNF561-219ENST00000494276 MSH5O43196 834 aa19.63■□□□□ 0.73
ZNF561-219ENST00000494276 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
ZNF561-219ENST00000494276 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
ZNF561-219ENST00000494276 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
ZNF561-219ENST00000494276 ADRA2BP18089 450 aa18.85■□□□□ 0.61
ZNF561-219ENST00000494276 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
ZNF561-219ENST00000494276 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
ZNF561-219ENST00000494276 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
ZNF561-219ENST00000494276 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
ZNF561-219ENST00000494276 DCAF8L1A6NGE4 600 aa16.88■□□□□ 0.29
ZNF561-219ENST00000494276 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
ZNF561-219ENST00000494276 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
ZNF561-219ENST00000494276 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
ZNF561-219ENST00000494276 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
ZNF561-219ENST00000494276 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
ZNF561-219ENST00000494276 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
ZNF561-219ENST00000494276 DNAJC5BQ9UF47 199 aa16.19■□□□□ 0.18
ZNF561-219ENST00000494276 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
ZNF561-219ENST00000494276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
ZNF561-219ENST00000494276 POTEHQ6S545 545 aa15.85■□□□□ 0.13
ZNF561-219ENST00000494276 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
ZNF561-219ENST00000494276 DSG3P32926 999 aa15.47■□□□□ 0.07
ZNF561-219ENST00000494276 CAPN15O75808 1086 aa15.46■□□□□ 0.07
ZNF561-219ENST00000494276 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
ZNF561-219ENST00000494276 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
ZNF561-219ENST00000494276 APLP2Q06481 763 aa15.15■□□□□ 0.02
ZNF561-219ENST00000494276 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
ZNF561-219ENST00000494276 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
ZNF561-219ENST00000494276 ABCB7O75027 752 aa15.01□□□□□ -0.01
ZNF561-219ENST00000494276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
ZNF561-219ENST00000494276 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
ZNF561-219ENST00000494276 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
ZNF561-219ENST00000494276 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
ZNF561-219ENST00000494276 KCNA4P22459 653 aa14.83□□□□□ -0.04
ZNF561-219ENST00000494276 RBM42Q9BTD8 480 aaKnown RBP14.83□□□□□ -0.04
ZNF561-219ENST00000494276 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
ZNF561-219ENST00000494276 POLA2Q14181 598 aa14.55□□□□□ -0.08
ZNF561-219ENST00000494276 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.09
ZNF561-219ENST00000494276 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
ZNF561-219ENST00000494276 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
ZNF561-219ENST00000494276 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
ZNF561-219ENST00000494276 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
ZNF561-219ENST00000494276 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
ZNF561-219ENST00000494276 HAX1O00165 279 aa14.1□□□□□ -0.15
ZNF561-219ENST00000494276 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
ZNF561-219ENST00000494276 OSCARQ8IYS5 282 aa14.07□□□□□ -0.16
ZNF561-219ENST00000494276 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
ZNF561-219ENST00000494276 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
ZNF561-219ENST00000494276 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
ZNF561-219ENST00000494276 EVX2Q03828 476 aa14□□□□□ -0.17
ZNF561-219ENST00000494276 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
ZNF561-219ENST00000494276 SPDYE2BA6NHP3 402 aa13.76□□□□□ -0.21
ZNF561-219ENST00000494276 SPDYE6P0CI01 402 aa13.76□□□□□ -0.21
ZNF561-219ENST00000494276 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
ZNF561-219ENST00000494276 FBLN2P98095 1184 aa13.73□□□□□ -0.21
ZNF561-219ENST00000494276 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
ZNF561-219ENST00000494276 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
ZNF561-219ENST00000494276 SPDYE1Q8NFV5 336 aaPredicted RBP13.66□□□□□ -0.22
ZNF561-219ENST00000494276 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
ZNF561-219ENST00000494276 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
ZNF561-219ENST00000494276 LHX8Q68G74 356 aa13.58□□□□□ -0.24
ZNF561-219ENST00000494276 ZBTB22O15209 634 aa13.56□□□□□ -0.24
ZNF561-219ENST00000494276 GABBR2O75899 941 aa13.55□□□□□ -0.24
ZNF561-219ENST00000494276 ZNF692Q9BU19 519 aaPredicted RBP13.53□□□□□ -0.24
ZNF561-219ENST00000494276 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
ZNF561-219ENST00000494276 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
ZNF561-219ENST00000494276 PRR29P0C7W0 189 aa13.38□□□□□ -0.27
ZNF561-219ENST00000494276 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
ZNF561-219ENST00000494276 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
ZNF561-219ENST00000494276 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZNF561-219ENST00000494276 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
ZNF561-219ENST00000494276 CLCN6P51797 869 aa13.21□□□□□ -0.29
ZNF561-219ENST00000494276 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
ZNF561-219ENST00000494276 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
ZNF561-219ENST00000494276 DCBLD2Q96PD2 775 aa13.11□□□□□ -0.31
ZNF561-219ENST00000494276 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
ZNF561-219ENST00000494276 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
ZNF561-219ENST00000494276 OTUD5Q96G74 571 aa12.96□□□□□ -0.33
ZNF561-219ENST00000494276 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
ZNF561-219ENST00000494276 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
ZNF561-219ENST00000494276 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
ZNF561-219ENST00000494276 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
ZNF561-219ENST00000494276 POTEMA6NI47 508 aa12.82□□□□□ -0.36
ZNF561-219ENST00000494276 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
ZNF561-219ENST00000494276 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
ZNF561-219ENST00000494276 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
ZNF561-219ENST00000494276 PHF12Q96QT6 1004 aa12.7□□□□□ -0.38
ZNF561-219ENST00000494276 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
ZNF561-219ENST00000494276 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
ZNF561-219ENST00000494276 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
ZNF561-219ENST00000494276 LCE2DQ5TA82 110 aaPredicted RBP12.62□□□□□ -0.39
ZNF561-219ENST00000494276 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
ZNF561-219ENST00000494276 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
ZNF561-219ENST00000494276 C7P10643 843 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms