RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
TRIM11-204ENST00000493030 EYSQ5T1H1 3165 aa7.7□□□□□ -1.18
TRIM11-204ENST00000493030 A6NN06 94 aa7.7□□□□□ -1.18
TRIM11-204ENST00000493030 DMXL1Q9Y485 3027 aa7.7□□□□□ -1.18
TRIM11-204ENST00000493030 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
TRIM11-204ENST00000493030 A8MUU9 505 aa7.68□□□□□ -1.18
TRIM11-204ENST00000493030 A8MU10 97 aa7.67□□□□□ -1.18
TRIM11-204ENST00000493030 NBEAQ8NFP9 2946 aa7.67□□□□□ -1.18
TRIM11-204ENST00000493030 UTP20O75691 2785 aaKnown RBP7.66□□□□□ -1.18
TRIM11-204ENST00000493030 LRBAP50851 2863 aa7.66□□□□□ -1.18
TRIM11-204ENST00000493030 ASH1LQ9NR48 2969 aaKnown RBP7.63□□□□□ -1.19
TRIM11-204ENST00000493030 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
TRIM11-204ENST00000493030 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
TRIM11-204ENST00000493030 HIVEP1P15822 2718 aa7.61□□□□□ -1.19
TRIM11-204ENST00000493030 APCP25054 2843 aa7.61□□□□□ -1.19
TRIM11-204ENST00000493030 KMT2BQ9UMN6 2715 aaPredicted RBP7.6□□□□□ -1.19
TRIM11-204ENST00000493030 CRYBG3Q68DQ2 2970 aa7.6□□□□□ -1.19
TRIM11-204ENST00000493030 TENM4Q6N022 2769 aa7.58□□□□□ -1.2
TRIM11-204ENST00000493030 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
TRIM11-204ENST00000493030 USP34Q70CQ2 3546 aa7.55□□□□□ -1.2
TRIM11-204ENST00000493030 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
TRIM11-204ENST00000493030 SPEGQ15772 3267 aa7.52□□□□□ -1.21
TRIM11-204ENST00000493030 HRNRQ86YZ3 2850 aaPredicted RBP7.5□□□□□ -1.21
TRIM11-204ENST00000493030 CFAP47Q6ZTR5 3102 aa7.48□□□□□ -1.21
TRIM11-204ENST00000493030 LOC400499M0QZD8 3231 aa7.46□□□□□ -1.21
TRIM11-204ENST00000493030 CELSR2Q9HCU4 2923 aa7.46□□□□□ -1.22
TRIM11-204ENST00000493030 ZANQ9Y493 2812 aa7.43□□□□□ -1.22
TRIM11-204ENST00000493030 NIPBLQ6KC79 2804 aaeCLIP7.43□□□□□ -1.226e-6■■■□□ 16.7
TRIM11-204ENST00000493030 KRTAP21-3Q3LHN1 58 aa7.42□□□□□ -1.22
TRIM11-204ENST00000493030 TNP1P09430 55 aa7.4□□□□□ -1.22
TRIM11-204ENST00000493030 DCHS2Q6V1P9 2916 aa7.36□□□□□ -1.23
TRIM11-204ENST00000493030 MYO15AQ9UKN7 3530 aa7.34□□□□□ -1.23
TRIM11-204ENST00000493030 XP32Q5T750 250 aa7.31□□□□□ -1.24
TRIM11-204ENST00000493030 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
TRIM11-204ENST00000493030 KRTAP1-4P0C5Y4 121 aa7.3□□□□□ -1.24
TRIM11-204ENST00000493030 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
TRIM11-204ENST00000493030 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
TRIM11-204ENST00000493030 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
TRIM11-204ENST00000493030 FBN2P35556 2912 aa7.2□□□□□ -1.26
TRIM11-204ENST00000493030 TENM1Q9UKZ4 2725 aa7.19□□□□□ -1.26
TRIM11-204ENST00000493030 NF1P21359 2839 aa7.19□□□□□ -1.26
TRIM11-204ENST00000493030 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
TRIM11-204ENST00000493030 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
TRIM11-204ENST00000493030 TPRXLQ17RH7 258 aa7.13□□□□□ -1.27
TRIM11-204ENST00000493030 MUC3AQ02505 3323 aa7.13□□□□□ -1.27
TRIM11-204ENST00000493030 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
TRIM11-204ENST00000493030 RELNP78509 3460 aa7.11□□□□□ -1.27
TRIM11-204ENST00000493030 PDZD2O15018 2839 aa7.1□□□□□ -1.27
TRIM11-204ENST00000493030 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
TRIM11-204ENST00000493030 H0YAA0 97 aa7.08□□□□□ -1.28
TRIM11-204ENST00000493030 DMDP11532 3685 aa7.06□□□□□ -1.28
TRIM11-204ENST00000493030 P0C880 135 aa7.06□□□□□ -1.28
TRIM11-204ENST00000493030 DCHS1Q96JQ0 3298 aa7.06□□□□□ -1.28
TRIM11-204ENST00000493030 LAMA5O15230 3695 aa7.04□□□□□ -1.28
TRIM11-204ENST00000493030 KRTAP13-3Q3SY46 172 aa7.03□□□□□ -1.28
TRIM11-204ENST00000493030 WDFY3Q8IZQ1 3526 aa7.02□□□□□ -1.28
TRIM11-204ENST00000493030 PKD1L1Q8TDX9 2849 aa6.99□□□□□ -1.29
TRIM11-204ENST00000493030 CELSR1Q9NYQ6 3014 aa6.97□□□□□ -1.29
TRIM11-204ENST00000493030 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.3
TRIM11-204ENST00000493030 TGP01266 2768 aa6.93□□□□□ -1.3
TRIM11-204ENST00000493030 OTOGQ6ZRI0 2925 aa6.91□□□□□ -1.3
TRIM11-204ENST00000493030 ASPMQ8IZT6 3477 aa6.91□□□□□ -1.3
TRIM11-204ENST00000493030 VWFP04275 2813 aa6.89□□□□□ -1.31
TRIM11-204ENST00000493030 ZFHX4Q86UP3 3567 aa6.86□□□□□ -1.31
TRIM11-204ENST00000493030 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
TRIM11-204ENST00000493030 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
TRIM11-204ENST00000493030 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.34
TRIM11-204ENST00000493030 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
TRIM11-204ENST00000493030 BSNQ9UPA5 3926 aa6.68□□□□□ -1.34
TRIM11-204ENST00000493030 CSMD1Q96PZ7 3565 aa6.66□□□□□ -1.34
TRIM11-204ENST00000493030 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
TRIM11-204ENST00000493030 FBN1P35555 2871 aaKnown RBP6.64□□□□□ -1.35
TRIM11-204ENST00000493030 SPENQ96T58 3664 aaKnown RBP6.62□□□□□ -1.35
TRIM11-204ENST00000493030 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
TRIM11-204ENST00000493030 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
TRIM11-204ENST00000493030 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
TRIM11-204ENST00000493030 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
TRIM11-204ENST00000493030 SVEP1Q4LDE5 3571 aa6.49□□□□□ -1.37
TRIM11-204ENST00000493030 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
TRIM11-204ENST00000493030 FBN3Q75N90 2809 aa6.39□□□□□ -1.39
TRIM11-204ENST00000493030 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
TRIM11-204ENST00000493030 TRRAPQ9Y4A5 3859 aa6.39□□□□□ -1.39
TRIM11-204ENST00000493030 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
TRIM11-204ENST00000493030 CUBNO60494 3623 aa6.32□□□□□ -1.4
TRIM11-204ENST00000493030 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
TRIM11-204ENST00000493030 COL7A1Q02388 2944 aa6.31□□□□□ -1.4
TRIM11-204ENST00000493030 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
TRIM11-204ENST00000493030 HUWE1Q7Z6Z7 4374 aaKnown RBP6.23□□□□□ -1.41
TRIM11-204ENST00000493030 AKAP9Q99996 3911 aa6.17□□□□□ -1.42
TRIM11-204ENST00000493030 INE1O15225 51 aa6.16□□□□□ -1.42
TRIM11-204ENST00000493030 CRCT1Q9UGL9 99 aa6.14□□□□□ -1.43
TRIM11-204ENST00000493030 ZNF469Q96JG9 3925 aaPredicted RBP6.13□□□□□ -1.43
TRIM11-204ENST00000493030 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
TRIM11-204ENST00000493030 VPS13CQ709C8 3753 aa6.13□□□□□ -1.43
TRIM11-204ENST00000493030 KRTAP10-12P60413 245 aa6.1□□□□□ -1.43
TRIM11-204ENST00000493030 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
TRIM11-204ENST00000493030 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
TRIM11-204ENST00000493030 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
TRIM11-204ENST00000493030 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
TRIM11-204ENST00000493030 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms