RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ASB16-AS1Q495Z4 193 aa8.47□□□□□ -1.05
POLR2J3-204ENST00000486319 PRR15Q8IV56 129 aa8.47□□□□□ -1.05
POLR2J3-204ENST00000486319 COX7CP15954 63 aa8.46□□□□□ -1.05
POLR2J3-204ENST00000486319 HCG22E2RYF7 251 aa8.45□□□□□ -1.06
POLR2J3-204ENST00000486319 KRTAP10-8P60410 259 aa8.45□□□□□ -1.06
POLR2J3-204ENST00000486319 Q5XG85 94 aa8.45□□□□□ -1.06
POLR2J3-204ENST00000486319 TNXBP22105 4242 aa8.45□□□□□ -1.06
POLR2J3-204ENST00000486319 UQCRQO14949 82 aa8.44□□□□□ -1.06
POLR2J3-204ENST00000486319 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
POLR2J3-204ENST00000486319 TRAV7A0A075B6U4 112 aa8.44□□□□□ -1.06
POLR2J3-204ENST00000486319 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
POLR2J3-204ENST00000486319 PRR26Q8N8Z3 221 aa8.43□□□□□ -1.06
POLR2J3-204ENST00000486319 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
POLR2J3-204ENST00000486319 SPINK1P00995 79 aa8.4□□□□□ -1.06
POLR2J3-204ENST00000486319 SPAG11AQ6PDA7 123 aa8.39□□□□□ -1.07
POLR2J3-204ENST00000486319 A0A1B0GVX0 72 aa8.39□□□□□ -1.07
POLR2J3-204ENST00000486319 CASC2Q6XLA1 102 aa8.38□□□□□ -1.07
POLR2J3-204ENST00000486319 WFDC13Q8IUB5 93 aa8.38□□□□□ -1.07
POLR2J3-204ENST00000486319 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
POLR2J3-204ENST00000486319 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-204ENST00000486319 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
POLR2J3-204ENST00000486319 HMCN2Q8NDA2 5059 aa8.37□□□□□ -1.07
POLR2J3-204ENST00000486319 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
POLR2J3-204ENST00000486319 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.07
POLR2J3-204ENST00000486319 C8orf17Q9NRJ1 99 aa8.34□□□□□ -1.07
POLR2J3-204ENST00000486319 C1orf195Q5TG92 126 aa8.34□□□□□ -1.08
POLR2J3-204ENST00000486319 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
POLR2J3-204ENST00000486319 C8orf87E5RJ46 101 aa8.29□□□□□ -1.08
POLR2J3-204ENST00000486319 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
POLR2J3-204ENST00000486319 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
POLR2J3-204ENST00000486319 C5orf47Q569G3 176 aa8.26□□□□□ -1.09
POLR2J3-204ENST00000486319 MRPL34Q9BQ48 92 aaKnown RBP8.26□□□□□ -1.09
POLR2J3-204ENST00000486319 KLKP1Q107X0 134 aa8.25□□□□□ -1.09
POLR2J3-204ENST00000486319 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
POLR2J3-204ENST00000486319 LINC00313P59037 77 aa8.24□□□□□ -1.09
POLR2J3-204ENST00000486319 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
POLR2J3-204ENST00000486319 TP53AIP1Q9HCN2 124 aa8.24□□□□□ -1.09
POLR2J3-204ENST00000486319 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
POLR2J3-204ENST00000486319 CYSTM1Q9H1C7 97 aa8.2□□□□□ -1.1
POLR2J3-204ENST00000486319 SNURFQ9Y675 71 aa8.2□□□□□ -1.1
POLR2J3-204ENST00000486319 NDUFS5O43920 106 aa8.19□□□□□ -1.1
POLR2J3-204ENST00000486319 MP68P56378 58 aa8.19□□□□□ -1.1
POLR2J3-204ENST00000486319 NDUFC1O43677 76 aa8.19□□□□□ -1.1
POLR2J3-204ENST00000486319 UBR4Q5T4S7 5183 aa8.18□□□□□ -1.1
POLR2J3-204ENST00000486319 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
POLR2J3-204ENST00000486319 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
POLR2J3-204ENST00000486319 LRP2P98164 4655 aa8.17□□□□□ -1.1
POLR2J3-204ENST00000486319 H3BPC8 53 aa8.16□□□□□ -1.1
POLR2J3-204ENST00000486319 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
POLR2J3-204ENST00000486319 H0Y9P7 68 aa8.15□□□□□ -1.1
POLR2J3-204ENST00000486319 TMEM258P61165 79 aa8.14□□□□□ -1.11
POLR2J3-204ENST00000486319 H7BZZ5 65 aa8.13□□□□□ -1.11
POLR2J3-204ENST00000486319 PRR4Q16378 134 aa8.13□□□□□ -1.11
POLR2J3-204ENST00000486319 Q8N9P0 234 aaPredicted RBP8.13□□□□□ -1.11
POLR2J3-204ENST00000486319 ZCCHC13Q8WW36 166 aaKnown RBP8.13□□□□□ -1.11
POLR2J3-204ENST00000486319 KRTAP16-1A8MUX0 517 aa8.12□□□□□ -1.11
POLR2J3-204ENST00000486319 LINC00208Q96KT6 92 aa8.11□□□□□ -1.11
POLR2J3-204ENST00000486319 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
POLR2J3-204ENST00000486319 LPAP08519 4548 aa8.07□□□□□ -1.12
POLR2J3-204ENST00000486319 RETNLBQ9BQ08 111 aa8.07□□□□□ -1.12
POLR2J3-204ENST00000486319 FAM236DA0A1B0GTK5 79 aa8.04□□□□□ -1.12
POLR2J3-204ENST00000486319 FAM236CP0DP71 79 aa8.04□□□□□ -1.12
POLR2J3-204ENST00000486319 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
POLR2J3-204ENST00000486319 ATP5EP56381 51 aaPredicted RBP8.03□□□□□ -1.12
POLR2J3-204ENST00000486319 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
POLR2J3-204ENST00000486319 Q5W150 140 aa8.02□□□□□ -1.13
POLR2J3-204ENST00000486319 LOC101927531A0A1B0GV80 90 aa8□□□□□ -1.13
POLR2J3-204ENST00000486319 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
POLR2J3-204ENST00000486319 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
POLR2J3-204ENST00000486319 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
POLR2J3-204ENST00000486319 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.14
POLR2J3-204ENST00000486319 A8MUU9 505 aa7.95□□□□□ -1.14
POLR2J3-204ENST00000486319 SPANXA2-OT1Q8N9U9 137 aa7.94□□□□□ -1.14
POLR2J3-204ENST00000486319 RPS28P62857 69 aaKnown RBP7.93□□□□□ -1.14
POLR2J3-204ENST00000486319 TPRXLQ17RH7 258 aa7.92□□□□□ -1.14
POLR2J3-204ENST00000486319 PCOTHQ58A44 107 aa7.92□□□□□ -1.14
POLR2J3-204ENST00000486319 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
POLR2J3-204ENST00000486319 IGKV2-30P06310 120 aa7.9□□□□□ -1.14
POLR2J3-204ENST00000486319 Q75L30 129 aa7.88□□□□□ -1.15
POLR2J3-204ENST00000486319 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
POLR2J3-204ENST00000486319 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
POLR2J3-204ENST00000486319 C7orf65Q6ZTY9 151 aa7.82□□□□□ -1.16
POLR2J3-204ENST00000486319 MUC2Q02817 5179 aa7.81□□□□□ -1.16
POLR2J3-204ENST00000486319 XP32Q5T750 250 aa7.8□□□□□ -1.16
POLR2J3-204ENST00000486319 HRES1P13985 223 aa7.79□□□□□ -1.16
POLR2J3-204ENST00000486319 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
POLR2J3-204ENST00000486319 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
POLR2J3-204ENST00000486319 SPINK7P58062 85 aa7.71□□□□□ -1.18
POLR2J3-204ENST00000486319 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
POLR2J3-204ENST00000486319 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
POLR2J3-204ENST00000486319 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
POLR2J3-204ENST00000486319 ACYP2P14621 99 aa7.68□□□□□ -1.18
POLR2J3-204ENST00000486319 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
POLR2J3-204ENST00000486319 COA5Q86WW8 74 aa7.68□□□□□ -1.18
POLR2J3-204ENST00000486319 A8MUN3 132 aa7.62□□□□□ -1.19
POLR2J3-204ENST00000486319 C4orf26Q17RF5 130 aa7.62□□□□□ -1.19
POLR2J3-204ENST00000486319 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
POLR2J3-204ENST00000486319 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
POLR2J3-204ENST00000486319 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
POLR2J3-204ENST00000486319 COX6B2Q6YFQ2 88 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms