RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 K7EQZ3 153 aa11.53□□□□□ -0.56
VCPKMT-203ENST00000484763 Q8N9L7 120 aa11.53□□□□□ -0.56
VCPKMT-203ENST00000484763 PCLOQ9Y6V0 5065 aa11.52□□□□□ -0.56
VCPKMT-203ENST00000484763 NDUFB1O75438 58 aa11.52□□□□□ -0.57
VCPKMT-203ENST00000484763 HIST1H4AP62805 103 aaKnown RBP11.5□□□□□ -0.57
VCPKMT-203ENST00000484763 PRR15Q8IV56 129 aa11.49□□□□□ -0.57
VCPKMT-203ENST00000484763 IMUPQ9GZP8 106 aa11.48□□□□□ -0.57
VCPKMT-203ENST00000484763 A0A1B0GVX0 72 aa11.47□□□□□ -0.57
VCPKMT-203ENST00000484763 IGHV6-1A0A0B4J1U7 121 aa11.45□□□□□ -0.58
VCPKMT-203ENST00000484763 FP248Q71RG6 208 aaPredicted RBP11.44□□□□□ -0.58
VCPKMT-203ENST00000484763 A0A087WVE0 104 aa11.42□□□□□ -0.58
VCPKMT-203ENST00000484763 C8orf87E5RJ46 101 aa11.38□□□□□ -0.59
VCPKMT-203ENST00000484763 C8orf17Q9NRJ1 99 aa11.38□□□□□ -0.59
VCPKMT-203ENST00000484763 MMP24-AS1A0A0U1RRL7 71 aa11.36□□□□□ -0.59
VCPKMT-203ENST00000484763 HCG22E2RYF7 251 aa11.36□□□□□ -0.59
VCPKMT-203ENST00000484763 LINC00313P59037 77 aa11.35□□□□□ -0.59
VCPKMT-203ENST00000484763 NOTCH2NLQ7Z3S9 236 aa11.35□□□□□ -0.59
VCPKMT-203ENST00000484763 IGLV7-46A0A075B6I9 117 aa11.34□□□□□ -0.59
VCPKMT-203ENST00000484763 PRR4Q16378 134 aa11.34□□□□□ -0.59
VCPKMT-203ENST00000484763 WFDC13Q8IUB5 93 aa11.32□□□□□ -0.6
VCPKMT-203ENST00000484763 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
VCPKMT-203ENST00000484763 hDV103S1A0JD37 113 aa11.3□□□□□ -0.6
VCPKMT-203ENST00000484763 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
VCPKMT-203ENST00000484763 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
VCPKMT-203ENST00000484763 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
VCPKMT-203ENST00000484763 TMEM254Q8TBM7 123 aa11.26□□□□□ -0.61
VCPKMT-203ENST00000484763 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
VCPKMT-203ENST00000484763 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
VCPKMT-203ENST00000484763 MRPL34Q9BQ48 92 aaKnown RBP11.23□□□□□ -0.61
VCPKMT-203ENST00000484763 TPRXLQ17RH7 258 aa11.21□□□□□ -0.62
VCPKMT-203ENST00000484763 C5orf47Q569G3 176 aa11.19□□□□□ -0.62
VCPKMT-203ENST00000484763 HERC1Q15751 4861 aa11.17□□□□□ -0.62
VCPKMT-203ENST00000484763 Q8N9P0 234 aaPredicted RBP11.15□□□□□ -0.62
VCPKMT-203ENST00000484763 ATOX1O00244 68 aa11.14□□□□□ -0.63
VCPKMT-203ENST00000484763 NDUFS5O43920 106 aa11.14□□□□□ -0.63
VCPKMT-203ENST00000484763 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
VCPKMT-203ENST00000484763 XP32Q5T750 250 aa11.11□□□□□ -0.63
VCPKMT-203ENST00000484763 SMIM20Q8N5G0 67 aa11.1□□□□□ -0.63
VCPKMT-203ENST00000484763 A8MUU9 505 aa11.09□□□□□ -0.63
VCPKMT-203ENST00000484763 OCR1Q9BZK8 76 aa11.09□□□□□ -0.63
VCPKMT-203ENST00000484763 TP53AIP1Q9HCN2 124 aa11.08□□□□□ -0.64
VCPKMT-203ENST00000484763 Q75L30 129 aa11.07□□□□□ -0.64
VCPKMT-203ENST00000484763 LPAP08519 4548 aa11.06□□□□□ -0.64
VCPKMT-203ENST00000484763 HMCN2Q8NDA2 5059 aa11.02□□□□□ -0.65
VCPKMT-203ENST00000484763 TRAV7A0A075B6U4 112 aa11.02□□□□□ -0.65
VCPKMT-203ENST00000484763 UQCRQO14949 82 aa11.02□□□□□ -0.65
VCPKMT-203ENST00000484763 RPL37P61927 97 aaKnown RBP11.02□□□□□ -0.65
VCPKMT-203ENST00000484763 ANAPC13Q9BS18 74 aa10.99□□□□□ -0.65
VCPKMT-203ENST00000484763 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
VCPKMT-203ENST00000484763 ZCCHC13Q8WW36 166 aaKnown RBP10.96□□□□□ -0.65
VCPKMT-203ENST00000484763 TRAV22A0A0B4J277 110 aa10.95□□□□□ -0.66
VCPKMT-203ENST00000484763 Q5W150 140 aa10.94□□□□□ -0.66
VCPKMT-203ENST00000484763 LRP2P98164 4655 aa10.94□□□□□ -0.66
VCPKMT-203ENST00000484763 ATP11AUNQ6ZP68 121 aa10.93□□□□□ -0.66
VCPKMT-203ENST00000484763 H0Y9P7 68 aa10.91□□□□□ -0.66
VCPKMT-203ENST00000484763 COX7CP15954 63 aa10.89□□□□□ -0.67
VCPKMT-203ENST00000484763 MP68P56378 58 aa10.89□□□□□ -0.67
VCPKMT-203ENST00000484763 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
VCPKMT-203ENST00000484763 H3BPC8 53 aa10.82□□□□□ -0.68
VCPKMT-203ENST00000484763 SEC61BP60468 96 aaKnown RBP10.82□□□□□ -0.68
VCPKMT-203ENST00000484763 LINC00208Q96KT6 92 aa10.81□□□□□ -0.68
VCPKMT-203ENST00000484763 C20orf197Q8N268 126 aa10.79□□□□□ -0.68
VCPKMT-203ENST00000484763 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
VCPKMT-203ENST00000484763 LOC101927531A0A1B0GV80 90 aa10.78□□□□□ -0.68
VCPKMT-203ENST00000484763 A0A0U1RQV1 116 aa10.77□□□□□ -0.69
VCPKMT-203ENST00000484763 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
VCPKMT-203ENST00000484763 IGKV2-30P06310 120 aa10.75□□□□□ -0.69
VCPKMT-203ENST00000484763 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
VCPKMT-203ENST00000484763 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
VCPKMT-203ENST00000484763 SNURFQ9Y675 71 aa10.74□□□□□ -0.69
VCPKMT-203ENST00000484763 C7orf65Q6ZTY9 151 aa10.73□□□□□ -0.69
VCPKMT-203ENST00000484763 KLKP1Q107X0 134 aa10.72□□□□□ -0.69
VCPKMT-203ENST00000484763 CYP4F30PQ9H0H9 118 aa10.7□□□□□ -0.7
VCPKMT-203ENST00000484763 SPINK7P58062 85 aa10.7□□□□□ -0.7
VCPKMT-203ENST00000484763 RPS28P62857 69 aaKnown RBP10.64□□□□□ -0.71
VCPKMT-203ENST00000484763 SEC61GP60059 68 aa10.62□□□□□ -0.71
VCPKMT-203ENST00000484763 CYSTM1Q9H1C7 97 aa10.61□□□□□ -0.71
VCPKMT-203ENST00000484763 NDUFC1O43677 76 aa10.58□□□□□ -0.72
VCPKMT-203ENST00000484763 KRTAP4-1Q9BYQ7 146 aa10.56□□□□□ -0.72
VCPKMT-203ENST00000484763 UBR4Q5T4S7 5183 aa10.55□□□□□ -0.72
VCPKMT-203ENST00000484763 H7BZZ5 65 aa10.54□□□□□ -0.72
VCPKMT-203ENST00000484763 HRES1P13985 223 aa10.52□□□□□ -0.73
VCPKMT-203ENST00000484763 C4orf26Q17RF5 130 aa10.47□□□□□ -0.73
VCPKMT-203ENST00000484763 PRO0628Q9UI54 55 aa10.45□□□□□ -0.74
VCPKMT-203ENST00000484763 SPANXA2-OT1Q8N9U9 137 aa10.44□□□□□ -0.74
VCPKMT-203ENST00000484763 MUC2Q02817 5179 aa10.43□□□□□ -0.74
VCPKMT-203ENST00000484763 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
VCPKMT-203ENST00000484763 RNF213Q63HN8 5207 aa10.42□□□□□ -0.74
VCPKMT-203ENST00000484763 V9GYY9 64 aa10.42□□□□□ -0.74
VCPKMT-203ENST00000484763 RBM12B-AS1Q9P1G2 102 aa10.4□□□□□ -0.74
VCPKMT-203ENST00000484763 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
VCPKMT-203ENST00000484763 TMEM258P61165 79 aa10.37□□□□□ -0.75
VCPKMT-203ENST00000484763 DMAC1Q96GE9 116 aa10.33□□□□□ -0.76
VCPKMT-203ENST00000484763 FAM236DA0A1B0GTK5 79 aa10.32□□□□□ -0.76
VCPKMT-203ENST00000484763 A8MUN3 132 aa10.32□□□□□ -0.76
VCPKMT-203ENST00000484763 FAM236CP0DP71 79 aa10.32□□□□□ -0.76
VCPKMT-203ENST00000484763 ATP5EP56381 51 aaPredicted RBP10.31□□□□□ -0.76
VCPKMT-203ENST00000484763 KRTAP3-1Q9BYR8 98 aa10.31□□□□□ -0.76
VCPKMT-203ENST00000484763 ACYP2P14621 99 aa10.23□□□□□ -0.77
VCPKMT-203ENST00000484763 KRTAP19-2Q3LHN2 52 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms