RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 KRTAP7-1Q8IUC3 87 aa2.18□□□□□ -2.06
SCN2A-205ENST00000480032 TENM4Q6N022 2769 aa2.18□□□□□ -2.06
SCN2A-205ENST00000480032 C10orf95Q9H7T3 257 aa2.17□□□□□ -2.06
SCN2A-205ENST00000480032 PCNTO95613 3336 aa2.16□□□□□ -2.06
SCN2A-205ENST00000480032 CEP350Q5VT06 3117 aa2.14□□□□□ -2.07
SCN2A-205ENST00000480032 KRTAP13-2Q52LG2 175 aa2.14□□□□□ -2.07
SCN2A-205ENST00000480032 KRTAP10-2P60368 255 aa2.13□□□□□ -2.07
SCN2A-205ENST00000480032 TNRC18O15417 2968 aaPredicted RBP2.13□□□□□ -2.07
SCN2A-205ENST00000480032 KRTAP1-5Q9BYS1 174 aa2.12□□□□□ -2.07
SCN2A-205ENST00000480032 KRTAP10-1P60331 282 aa2.11□□□□□ -2.07
SCN2A-205ENST00000480032 A0A0C4DFX4 3053 aa2.11□□□□□ -2.07
SCN2A-205ENST00000480032 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
SCN2A-205ENST00000480032 VWFP04275 2813 aa2.09□□□□□ -2.07
SCN2A-205ENST00000480032 KRTAP10-8P60410 259 aa2.09□□□□□ -2.07
SCN2A-205ENST00000480032 PKD1L1Q8TDX9 2849 aa2.09□□□□□ -2.08
SCN2A-205ENST00000480032 A0A1B0GVY2 172 aa2.09□□□□□ -2.08
SCN2A-205ENST00000480032 KRTAP1-4P0C5Y4 121 aa2.08□□□□□ -2.08
SCN2A-205ENST00000480032 XIRP2A4UGR9 3374 aa2.08□□□□□ -2.08
SCN2A-205ENST00000480032 SZT2Q5T011 3432 aa2.08□□□□□ -2.08
SCN2A-205ENST00000480032 KRTAP10-6P60371 365 aaPredicted RBP2.07□□□□□ -2.08
SCN2A-205ENST00000480032 CFAP54Q96N23 3096 aa2.06□□□□□ -2.08
SCN2A-205ENST00000480032 UNC80Q8N2C7 3258 aa2.05□□□□□ -2.08
SCN2A-205ENST00000480032 MT3P25713 68 aa2.05□□□□□ -2.08
SCN2A-205ENST00000480032 FRYLO94915 3013 aa2.05□□□□□ -2.08
SCN2A-205ENST00000480032 KRTAP10-10P60014 251 aa2.05□□□□□ -2.08
SCN2A-205ENST00000480032 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
SCN2A-205ENST00000480032 DCHS2Q6V1P9 2916 aa2.04□□□□□ -2.08
SCN2A-205ENST00000480032 NBEAQ8NFP9 2946 aa2.04□□□□□ -2.08
SCN2A-205ENST00000480032 MEGF8Q7Z7M0 2845 aa2.03□□□□□ -2.08
SCN2A-205ENST00000480032 BRCA2P51587 3418 aa2.03□□□□□ -2.08
SCN2A-205ENST00000480032 MGAQ8IWI9 3026 aa2.03□□□□□ -2.08
SCN2A-205ENST00000480032 VCANP13611 3396 aa2.03□□□□□ -2.08
SCN2A-205ENST00000480032 CDH23Q9H251 3354 aa2.02□□□□□ -2.09
SCN2A-205ENST00000480032 DNAH12Q6ZR08 3092 aa2.01□□□□□ -2.09
SCN2A-205ENST00000480032 OTOGQ6ZRI0 2925 aa2.01□□□□□ -2.09
SCN2A-205ENST00000480032 C5orf42Q9H799 3197 aa2.01□□□□□ -2.09
SCN2A-205ENST00000480032 HRNRQ86YZ3 2850 aaPredicted RBP2.01□□□□□ -2.09
SCN2A-205ENST00000480032 REV3LO60673 3130 aa2□□□□□ -2.09
SCN2A-205ENST00000480032 CRYBG3Q68DQ2 2970 aa1.99□□□□□ -2.09
SCN2A-205ENST00000480032 CELSR3Q9NYQ7 3312 aa1.99□□□□□ -2.09
SCN2A-205ENST00000480032 MKI67P46013 3256 aaKnown RBP1.99□□□□□ -2.09
SCN2A-205ENST00000480032 TRIOO75962 3097 aa1.98□□□□□ -2.09
SCN2A-205ENST00000480032 FBN3Q75N90 2809 aa1.98□□□□□ -2.09
SCN2A-205ENST00000480032 SPRR5A0A1B0GTR4 108 aa1.98□□□□□ -2.09
SCN2A-205ENST00000480032 LAMA3Q16787 3333 aa1.97□□□□□ -2.09
SCN2A-205ENST00000480032 KRTAP3-1Q9BYR8 98 aa1.96□□□□□ -2.1
SCN2A-205ENST00000480032 EYSQ5T1H1 3165 aa1.96□□□□□ -2.1
SCN2A-205ENST00000480032 KRTAP3-2Q9BYR7 98 aa1.96□□□□□ -2.1
SCN2A-205ENST00000480032 ATMQ13315 3056 aa1.96□□□□□ -2.1
SCN2A-205ENST00000480032 COL12A1Q99715 3063 aa1.95□□□□□ -2.1
SCN2A-205ENST00000480032 ZZEF1O43149 2961 aa1.95□□□□□ -2.1
SCN2A-205ENST00000480032 TACC2O95359 2948 aa1.95□□□□□ -2.1
SCN2A-205ENST00000480032 FRYQ5TBA9 3013 aa1.94□□□□□ -2.1
SCN2A-205ENST00000480032 FREM2Q5SZK8 3169 aa1.93□□□□□ -2.1
SCN2A-205ENST00000480032 LAMA2P24043 3122 aaKnown RBP1.93□□□□□ -2.1
SCN2A-205ENST00000480032 DMXL2Q8TDJ6 3036 aa1.92□□□□□ -2.1
SCN2A-205ENST00000480032 DNAH14Q0VDD8 3507 aa1.92□□□□□ -2.1
SCN2A-205ENST00000480032 COL6A3P12111 3177 aa1.92□□□□□ -2.1
SCN2A-205ENST00000480032 BOD1L1Q8NFC6 3051 aa1.9□□□□□ -2.11
SCN2A-205ENST00000480032 FBN2P35556 2912 aa1.9□□□□□ -2.11
SCN2A-205ENST00000480032 WDFY4Q6ZS81 3184 aa1.9□□□□□ -2.11
SCN2A-205ENST00000480032 LAMA1P25391 3075 aa1.89□□□□□ -2.11
SCN2A-205ENST00000480032 RYR1P21817 5038 aa1.89□□□□□ -2.11
SCN2A-205ENST00000480032 USP34Q70CQ2 3546 aa1.88□□□□□ -2.11
SCN2A-205ENST00000480032 CRCT1Q9UGL9 99 aa1.88□□□□□ -2.11
SCN2A-205ENST00000480032 SPEGQ15772 3267 aa1.88□□□□□ -2.11
SCN2A-205ENST00000480032 ADGRG4Q8IZF6 3080 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 KRTAP8-1Q8IUC2 63 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 ASPMQ8IZT6 3477 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 PRUNE2Q8WUY3 3088 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 DCHS1Q96JQ0 3298 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 MYO15AQ9UKN7 3530 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 KRTAP3-3Q9BYR6 98 aa1.87□□□□□ -2.11
SCN2A-205ENST00000480032 CFAP47Q6ZTR5 3102 aa1.86□□□□□ -2.11
SCN2A-205ENST00000480032 DMXL1Q9Y485 3027 aa1.85□□□□□ -2.11
SCN2A-205ENST00000480032 VPS13AQ96RL7 3174 aa1.84□□□□□ -2.11
SCN2A-205ENST00000480032 COL7A1Q02388 2944 aa1.81□□□□□ -2.12
SCN2A-205ENST00000480032 LORP23490 312 aaPredicted RBP1.81□□□□□ -2.12
SCN2A-205ENST00000480032 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
SCN2A-205ENST00000480032 SPTBN5Q9NRC6 3674 aaKnown RBP1.79□□□□□ -2.12
SCN2A-205ENST00000480032 CELSR1Q9NYQ6 3014 aa1.79□□□□□ -2.12
SCN2A-205ENST00000480032 ZFHX3Q15911 3703 aa1.78□□□□□ -2.13
SCN2A-205ENST00000480032 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
SCN2A-205ENST00000480032 MUC3AQ02505 3323 aa1.76□□□□□ -2.13
SCN2A-205ENST00000480032 LOC400499M0QZD8 3231 aa1.75□□□□□ -2.13
SCN2A-205ENST00000480032 KRTAP17-1Q9BYP8 105 aa1.74□□□□□ -2.13
SCN2A-205ENST00000480032 ZFHX4Q86UP3 3567 aa1.72□□□□□ -2.13
SCN2A-205ENST00000480032 NBPF19A0A087WUL8 3843 aa1.71□□□□□ -2.13
SCN2A-205ENST00000480032 RELNP78509 3460 aa1.71□□□□□ -2.14
SCN2A-205ENST00000480032 KRTAP10-4P60372 401 aaPredicted RBP1.7□□□□□ -2.14
SCN2A-205ENST00000480032 SPRR2GQ9BYE4 73 aa1.69□□□□□ -2.14
SCN2A-205ENST00000480032 WDFY3Q8IZQ1 3526 aa1.68□□□□□ -2.14
SCN2A-205ENST00000480032 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
SCN2A-205ENST00000480032 KRTAP10-7P60409 375 aaPredicted RBP1.68□□□□□ -2.14
SCN2A-205ENST00000480032 BSNQ9UPA5 3926 aa1.65□□□□□ -2.15
SCN2A-205ENST00000480032 BIRC6Q9NR09 4857 aa1.64□□□□□ -2.15
SCN2A-205ENST00000480032 KRTAP4-5Q9BYR2 181 aa1.63□□□□□ -2.15
SCN2A-205ENST00000480032 RYR2Q92736 4967 aa1.63□□□□□ -2.15
SCN2A-205ENST00000480032 LRP1BQ9NZR2 4599 aa1.63□□□□□ -2.15
SCN2A-205ENST00000480032 KRTAP10-5P60370 271 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms