RNA–Protein interactions for RNA: ENST00000479356.1

SDK2-204, Transcript of sidekick cell adhesion molecule 2, humanhuman

TSL 1 (best)

Gene SDK2, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK2-204ENST00000479356 DMXL2Q8TDJ6 3036 aa7.33□□□□□ -1.24
SDK2-204ENST00000479356 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
SDK2-204ENST00000479356 TACC2O95359 2948 aa7.31□□□□□ -1.24
SDK2-204ENST00000479356 ITPR2Q14571 2701 aa7.3□□□□□ -1.24
SDK2-204ENST00000479356 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
SDK2-204ENST00000479356 TNP1P09430 55 aa7.25□□□□□ -1.25
SDK2-204ENST00000479356 UTP20O75691 2785 aaKnown RBP7.25□□□□□ -1.25
SDK2-204ENST00000479356 SPEGQ15772 3267 aa7.24□□□□□ -1.25
SDK2-204ENST00000479356 Q5VSD8 79 aa7.23□□□□□ -1.25
SDK2-204ENST00000479356 KRTAP7-1Q8IUC3 87 aa7.21□□□□□ -1.25
SDK2-204ENST00000479356 NSD1Q96L73 2696 aaPredicted RBP7.21□□□□□ -1.26
SDK2-204ENST00000479356 P0C880 135 aa7.2□□□□□ -1.26
SDK2-204ENST00000479356 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
SDK2-204ENST00000479356 Q6ZRN7 208 aaPredicted RBP7.19□□□□□ -1.26
SDK2-204ENST00000479356 EYSQ5T1H1 3165 aa7.18□□□□□ -1.26
SDK2-204ENST00000479356 REV3LO60673 3130 aa7.18□□□□□ -1.26
SDK2-204ENST00000479356 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
SDK2-204ENST00000479356 CFAP47Q6ZTR5 3102 aa7.16□□□□□ -1.26
SDK2-204ENST00000479356 ZZEF1O43149 2961 aa7.15□□□□□ -1.26
SDK2-204ENST00000479356 USP34Q70CQ2 3546 aa7.14□□□□□ -1.27
SDK2-204ENST00000479356 DMXL1Q9Y485 3027 aa7.13□□□□□ -1.27
SDK2-204ENST00000479356 HIVEP1P15822 2718 aa7.13□□□□□ -1.27
SDK2-204ENST00000479356 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
SDK2-204ENST00000479356 APCP25054 2843 aa7.11□□□□□ -1.27
SDK2-204ENST00000479356 KMT2BQ9UMN6 2715 aaPredicted RBP7.08□□□□□ -1.28
SDK2-204ENST00000479356 H0YAA0 97 aa7.06□□□□□ -1.28
SDK2-204ENST00000479356 ZANQ9Y493 2812 aa7.06□□□□□ -1.28
SDK2-204ENST00000479356 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
SDK2-204ENST00000479356 HRNRQ86YZ3 2850 aaPredicted RBP7.05□□□□□ -1.28
SDK2-204ENST00000479356 LOC400499M0QZD8 3231 aa7.04□□□□□ -1.28
SDK2-204ENST00000479356 CELSR2Q9HCU4 2923 aa7.02□□□□□ -1.29
SDK2-204ENST00000479356 NIPBLQ6KC79 2804 aaeCLIP7.02□□□□□ -1.29
SDK2-204ENST00000479356 KRTAP13-2Q52LG2 175 aa7.01□□□□□ -1.29
SDK2-204ENST00000479356 MYO15AQ9UKN7 3530 aa7.01□□□□□ -1.29
SDK2-204ENST00000479356 CRYBG3Q68DQ2 2970 aa6.96□□□□□ -1.3
SDK2-204ENST00000479356 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
SDK2-204ENST00000479356 DCHS2Q6V1P9 2916 aa6.94□□□□□ -1.3
SDK2-204ENST00000479356 TENM4Q6N022 2769 aa6.89□□□□□ -1.31
SDK2-204ENST00000479356 FBN2P35556 2912 aa6.88□□□□□ -1.31
SDK2-204ENST00000479356 NF1P21359 2839 aa6.83□□□□□ -1.32
SDK2-204ENST00000479356 RELNP78509 3460 aa6.77□□□□□ -1.33
SDK2-204ENST00000479356 WDFY3Q8IZQ1 3526 aa6.75□□□□□ -1.33
SDK2-204ENST00000479356 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.33
SDK2-204ENST00000479356 MXRA5Q9NR99 2828 aa6.7□□□□□ -1.34
SDK2-204ENST00000479356 ASPMQ8IZT6 3477 aa6.65□□□□□ -1.34
SDK2-204ENST00000479356 ZFHX4Q86UP3 3567 aa6.65□□□□□ -1.35
SDK2-204ENST00000479356 LAMA5O15230 3695 aa6.64□□□□□ -1.35
SDK2-204ENST00000479356 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
SDK2-204ENST00000479356 DCHS1Q96JQ0 3298 aa6.6□□□□□ -1.35
SDK2-204ENST00000479356 TENM3Q9P273 2699 aa6.58□□□□□ -1.36
SDK2-204ENST00000479356 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
SDK2-204ENST00000479356 XP32Q5T750 250 aa6.57□□□□□ -1.36
SDK2-204ENST00000479356 DMDP11532 3685 aa6.56□□□□□ -1.36
SDK2-204ENST00000479356 TENM1Q9UKZ4 2725 aa6.53□□□□□ -1.36
SDK2-204ENST00000479356 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
SDK2-204ENST00000479356 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
SDK2-204ENST00000479356 PDZD2O15018 2839 aa6.51□□□□□ -1.37
SDK2-204ENST00000479356 TENM2Q9NT68 2774 aa6.51□□□□□ -1.37
SDK2-204ENST00000479356 MUC3AQ02505 3323 aa6.51□□□□□ -1.37
SDK2-204ENST00000479356 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
SDK2-204ENST00000479356 INE1O15225 51 aa6.48□□□□□ -1.37
SDK2-204ENST00000479356 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
SDK2-204ENST00000479356 CSMD1Q96PZ7 3565 aa6.47□□□□□ -1.37
SDK2-204ENST00000479356 SMG1Q96Q15 3661 aaKnown RBP6.44□□□□□ -1.38
SDK2-204ENST00000479356 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
SDK2-204ENST00000479356 NBPF19A0A087WUL8 3843 aa6.43□□□□□ -1.38
SDK2-204ENST00000479356 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
SDK2-204ENST00000479356 PKD1L1Q8TDX9 2849 aa6.36□□□□□ -1.39
SDK2-204ENST00000479356 TGP01266 2768 aa6.36□□□□□ -1.39
SDK2-204ENST00000479356 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
SDK2-204ENST00000479356 OTOGQ6ZRI0 2925 aa6.34□□□□□ -1.39
SDK2-204ENST00000479356 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
SDK2-204ENST00000479356 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
SDK2-204ENST00000479356 VWFP04275 2813 aa6.3□□□□□ -1.4
SDK2-204ENST00000479356 SVEP1Q4LDE5 3571 aa6.29□□□□□ -1.4
SDK2-204ENST00000479356 ANK3Q12955 4377 aaKnown RBP6.27□□□□□ -1.41
SDK2-204ENST00000479356 ZFHX3Q15911 3703 aa6.22□□□□□ -1.41
SDK2-204ENST00000479356 SPENQ96T58 3664 aaKnown RBP6.21□□□□□ -1.42
SDK2-204ENST00000479356 CSMD2Q7Z408 3487 aa6.17□□□□□ -1.42
SDK2-204ENST00000479356 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
SDK2-204ENST00000479356 BSNQ9UPA5 3926 aa6.11□□□□□ -1.43
SDK2-204ENST00000479356 CUBNO60494 3623 aa6.1□□□□□ -1.43
SDK2-204ENST00000479356 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
SDK2-204ENST00000479356 TRRAPQ9Y4A5 3859 aa6.07□□□□□ -1.44
SDK2-204ENST00000479356 FBN3Q75N90 2809 aa6.03□□□□□ -1.44
SDK2-204ENST00000479356 MEGF8Q7Z7M0 2845 aa5.93□□□□□ -1.46
SDK2-204ENST00000479356 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
SDK2-204ENST00000479356 HUWE1Q7Z6Z7 4374 aaKnown RBP5.89□□□□□ -1.47
SDK2-204ENST00000479356 VPS13CQ709C8 3753 aa5.86□□□□□ -1.47
SDK2-204ENST00000479356 COL7A1Q02388 2944 aa5.81□□□□□ -1.48
SDK2-204ENST00000479356 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
SDK2-204ENST00000479356 KRTAP3-2Q9BYR7 98 aa5.81□□□□□ -1.48
SDK2-204ENST00000479356 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
SDK2-204ENST00000479356 KRTAP10-4P60372 401 aaPredicted RBP5.75□□□□□ -1.49
SDK2-204ENST00000479356 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
SDK2-204ENST00000479356 ALMS1Q8TCU4 4167 aa5.7□□□□□ -1.5
SDK2-204ENST00000479356 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
SDK2-204ENST00000479356 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
SDK2-204ENST00000479356 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
SDK2-204ENST00000479356 ZNF469Q96JG9 3925 aaPredicted RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms