RNA–Protein interactions for RNA: ENST00000479356.1

SDK2-204, Transcript of sidekick cell adhesion molecule 2, humanhuman

TSL 1 (best)

Gene SDK2, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK2-204ENST00000479356 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
SDK2-204ENST00000479356 NISCHQ9Y2I1 1504 aa21.31■■□□□ 1
SDK2-204ENST00000479356 PELP1Q8IZL8 1130 aaKnown RBP21.3■■□□□ 1
SDK2-204ENST00000479356 MYT1Q01538 1121 aa21■□□□□ 0.95
SDK2-204ENST00000479356 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
SDK2-204ENST00000479356 SHROOM4Q9ULL8 1493 aa20.39■□□□□ 0.85
SDK2-204ENST00000479356 ERICH6Q7L0X2 663 aa20.38■□□□□ 0.85
SDK2-204ENST00000479356 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
SDK2-204ENST00000479356 CENPBP07199 599 aaPredicted RBP20.19■□□□□ 0.82
SDK2-204ENST00000479356 EHMT2Q96KQ7 1210 aa19.8■□□□□ 0.76
SDK2-204ENST00000479356 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
SDK2-204ENST00000479356 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
SDK2-204ENST00000479356 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
SDK2-204ENST00000479356 NEFLP07196 543 aa19.58■□□□□ 0.72
SDK2-204ENST00000479356 APLP2Q06481 763 aa19.49■□□□□ 0.71
SDK2-204ENST00000479356 YTHDC1Q96MU7 727 aaKnown RBP19.45■□□□□ 0.7
SDK2-204ENST00000479356 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
SDK2-204ENST00000479356 DAXXQ9UER7 740 aaPredicted RBP19.15■□□□□ 0.66
SDK2-204ENST00000479356 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
SDK2-204ENST00000479356 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.64
SDK2-204ENST00000479356 HRCP23327 699 aa18.97■□□□□ 0.63
SDK2-204ENST00000479356 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
SDK2-204ENST00000479356 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
SDK2-204ENST00000479356 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
SDK2-204ENST00000479356 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
SDK2-204ENST00000479356 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
SDK2-204ENST00000479356 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
SDK2-204ENST00000479356 GLIPR1L2Q4G1C9 344 aa18.5■□□□□ 0.55
SDK2-204ENST00000479356 CHIC1Q5VXU3 224 aa18.47■□□□□ 0.55
SDK2-204ENST00000479356 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
SDK2-204ENST00000479356 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
SDK2-204ENST00000479356 EIF5BO60841 1220 aaKnown RBP18.41■□□□□ 0.54
SDK2-204ENST00000479356 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
SDK2-204ENST00000479356 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
SDK2-204ENST00000479356 CDK11AQ9UQ88 783 aaPredicted RBP18.32■□□□□ 0.52
SDK2-204ENST00000479356 ABCC9O60706 1549 aa18.29■□□□□ 0.52
SDK2-204ENST00000479356 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
SDK2-204ENST00000479356 BCANQ96GW7 911 aa18.19■□□□□ 0.5
SDK2-204ENST00000479356 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.5
SDK2-204ENST00000479356 ITGAEP38570 1179 aa18.13■□□□□ 0.49
SDK2-204ENST00000479356 POLR3GLQ9BT43 218 aa18.13■□□□□ 0.49
SDK2-204ENST00000479356 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.49
SDK2-204ENST00000479356 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
SDK2-204ENST00000479356 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
SDK2-204ENST00000479356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
SDK2-204ENST00000479356 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
SDK2-204ENST00000479356 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
SDK2-204ENST00000479356 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
SDK2-204ENST00000479356 ANP32CO43423 234 aa17.82■□□□□ 0.44
SDK2-204ENST00000479356 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
SDK2-204ENST00000479356 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
SDK2-204ENST00000479356 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
SDK2-204ENST00000479356 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
SDK2-204ENST00000479356 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
SDK2-204ENST00000479356 NBR1Q14596 966 aa17.67■□□□□ 0.42
SDK2-204ENST00000479356 FKBP8Q14318 412 aa17.63■□□□□ 0.41
SDK2-204ENST00000479356 ANP32EQ9BTT0 268 aa17.62■□□□□ 0.41
SDK2-204ENST00000479356 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
SDK2-204ENST00000479356 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
SDK2-204ENST00000479356 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
SDK2-204ENST00000479356 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
SDK2-204ENST00000479356 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
SDK2-204ENST00000479356 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
SDK2-204ENST00000479356 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
SDK2-204ENST00000479356 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
SDK2-204ENST00000479356 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
SDK2-204ENST00000479356 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
SDK2-204ENST00000479356 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
SDK2-204ENST00000479356 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
SDK2-204ENST00000479356 P3H3Q8IVL6 736 aa17.42■□□□□ 0.38
SDK2-204ENST00000479356 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
SDK2-204ENST00000479356 TRIM44Q96DX7 344 aaPredicted RBP17.4■□□□□ 0.38
SDK2-204ENST00000479356 FBLN2P98095 1184 aa17.4■□□□□ 0.38
SDK2-204ENST00000479356 ARXQ96QS3 562 aa17.4■□□□□ 0.38
SDK2-204ENST00000479356 CCDC136Q96JN2 1154 aa17.33■□□□□ 0.36
SDK2-204ENST00000479356 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
SDK2-204ENST00000479356 ARID3CA6NKF2 412 aa17.31■□□□□ 0.36
SDK2-204ENST00000479356 NEFMP07197 916 aa17.31■□□□□ 0.36
SDK2-204ENST00000479356 NAP1L5Q96NT1 182 aaPredicted RBP17.3■□□□□ 0.36
SDK2-204ENST00000479356 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
SDK2-204ENST00000479356 NCLP19338 710 aaKnown RBP17.28■□□□□ 0.36
SDK2-204ENST00000479356 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
SDK2-204ENST00000479356 NACADO15069 1562 aa17.27■□□□□ 0.35
SDK2-204ENST00000479356 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
SDK2-204ENST00000479356 RTN4Q9NQC3 1192 aaKnown RBP17.24■□□□□ 0.35
SDK2-204ENST00000479356 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
SDK2-204ENST00000479356 BECN1Q14457 450 aa17.18■□□□□ 0.34
SDK2-204ENST00000479356 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
SDK2-204ENST00000479356 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
SDK2-204ENST00000479356 GOLGA6L22H0YM25 854 aa17.13■□□□□ 0.33
SDK2-204ENST00000479356 DNTTIP2Q5QJE6 756 aaKnown RBP17.12■□□□□ 0.33
SDK2-204ENST00000479356 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
SDK2-204ENST00000479356 RSF1Q96T23 1441 aaPredicted RBP17.1■□□□□ 0.33
SDK2-204ENST00000479356 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
SDK2-204ENST00000479356 FAM9BQ8IZU0 186 aa17.06■□□□□ 0.32
SDK2-204ENST00000479356 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
SDK2-204ENST00000479356 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
SDK2-204ENST00000479356 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
SDK2-204ENST00000479356 DDX10Q13206 875 aaKnown RBP17.01■□□□□ 0.31
SDK2-204ENST00000479356 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms