RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 C20orf197Q8N268 126 aa9.85□□□□□ -0.83
EPHB4-204ENST00000477446 OCR1Q9BZK8 76 aa9.85□□□□□ -0.83
EPHB4-204ENST00000477446 KLKP1Q107X0 134 aa9.84□□□□□ -0.83
EPHB4-204ENST00000477446 HCG22E2RYF7 251 aa9.84□□□□□ -0.83
EPHB4-204ENST00000477446 MOBPQ13875 183 aa9.82□□□□□ -0.84
EPHB4-204ENST00000477446 A8MWP4 228 aa9.81□□□□□ -0.84
EPHB4-204ENST00000477446 NDUFC1O43677 76 aa9.81□□□□□ -0.84
EPHB4-204ENST00000477446 PRR15Q8IV56 129 aa9.8□□□□□ -0.84
EPHB4-204ENST00000477446 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
EPHB4-204ENST00000477446 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
EPHB4-204ENST00000477446 NDUFB1O75438 58 aa9.78□□□□□ -0.84
EPHB4-204ENST00000477446 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
EPHB4-204ENST00000477446 CD164Q04900 197 aa9.77□□□□□ -0.85
EPHB4-204ENST00000477446 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
EPHB4-204ENST00000477446 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
EPHB4-204ENST00000477446 HERC1Q15751 4861 aa9.74□□□□□ -0.85
EPHB4-204ENST00000477446 C5orf47Q569G3 176 aa9.73□□□□□ -0.85
EPHB4-204ENST00000477446 H7BZZ5 65 aa9.72□□□□□ -0.85
EPHB4-204ENST00000477446 RPS28P62857 69 aaKnown RBP9.72□□□□□ -0.85
EPHB4-204ENST00000477446 Q96NJ1 140 aa9.71□□□□□ -0.85
EPHB4-204ENST00000477446 SNURFQ9Y675 71 aa9.71□□□□□ -0.85
EPHB4-204ENST00000477446 A0A0U1RQV1 116 aa9.71□□□□□ -0.86
EPHB4-204ENST00000477446 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.86
EPHB4-204ENST00000477446 CASC2Q6XLA1 102 aa9.71□□□□□ -0.86
EPHB4-204ENST00000477446 SPAG11AQ6PDA7 123 aa9.7□□□□□ -0.86
EPHB4-204ENST00000477446 HRCT1Q6UXD1 115 aa9.7□□□□□ -0.86
EPHB4-204ENST00000477446 WFDC13Q8IUB5 93 aa9.69□□□□□ -0.86
EPHB4-204ENST00000477446 ATP5EP56381 51 aaPredicted RBP9.67□□□□□ -0.86
EPHB4-204ENST00000477446 FAM236DA0A1B0GTK5 79 aa9.66□□□□□ -0.86
EPHB4-204ENST00000477446 SPINK1P00995 79 aa9.66□□□□□ -0.86
EPHB4-204ENST00000477446 FAM236CP0DP71 79 aa9.66□□□□□ -0.86
EPHB4-204ENST00000477446 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
EPHB4-204ENST00000477446 MMP24-AS1A0A0U1RRL7 71 aa9.63□□□□□ -0.87
EPHB4-204ENST00000477446 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
EPHB4-204ENST00000477446 hDV103S1A0JD37 113 aa9.62□□□□□ -0.87
EPHB4-204ENST00000477446 H3BPC8 53 aa9.62□□□□□ -0.87
EPHB4-204ENST00000477446 MP68P56378 58 aa9.62□□□□□ -0.87
EPHB4-204ENST00000477446 RPS29P62273 56 aaKnown RBP9.61□□□□□ -0.87
EPHB4-204ENST00000477446 Q5XG85 94 aa9.6□□□□□ -0.87
EPHB4-204ENST00000477446 C8orf17Q9NRJ1 99 aa9.6□□□□□ -0.87
EPHB4-204ENST00000477446 ZCCHC13Q8WW36 166 aaKnown RBP9.59□□□□□ -0.87
EPHB4-204ENST00000477446 TP53AIP1Q9HCN2 124 aa9.59□□□□□ -0.87
EPHB4-204ENST00000477446 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
EPHB4-204ENST00000477446 SERP1Q9Y6X1 66 aa9.55□□□□□ -0.88
EPHB4-204ENST00000477446 IGHV6-1A0A0B4J1U7 121 aa9.54□□□□□ -0.88
EPHB4-204ENST00000477446 LIMD2Q9BT23 127 aa9.54□□□□□ -0.88
EPHB4-204ENST00000477446 C8orf87E5RJ46 101 aa9.52□□□□□ -0.89
EPHB4-204ENST00000477446 HMCN2Q8NDA2 5059 aa9.52□□□□□ -0.89
EPHB4-204ENST00000477446 H0Y9P7 68 aa9.51□□□□□ -0.89
EPHB4-204ENST00000477446 PRR4Q16378 134 aa9.51□□□□□ -0.89
EPHB4-204ENST00000477446 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
EPHB4-204ENST00000477446 TRAV22A0A0B4J277 110 aa9.48□□□□□ -0.89
EPHB4-204ENST00000477446 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
EPHB4-204ENST00000477446 C1orf195Q5TG92 126 aa9.44□□□□□ -0.9
EPHB4-204ENST00000477446 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
EPHB4-204ENST00000477446 C1orf64Q8NEQ6 169 aa9.43□□□□□ -0.9
EPHB4-204ENST00000477446 IGLV7-46A0A075B6I9 117 aa9.42□□□□□ -0.9
EPHB4-204ENST00000477446 NDUFS5O43920 106 aa9.41□□□□□ -0.9
EPHB4-204ENST00000477446 SPANXA2-OT1Q8N9U9 137 aa9.41□□□□□ -0.9
EPHB4-204ENST00000477446 LINC00313P59037 77 aa9.4□□□□□ -0.9
EPHB4-204ENST00000477446 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
EPHB4-204ENST00000477446 CYP4F30PQ9H0H9 118 aa9.4□□□□□ -0.9
EPHB4-204ENST00000477446 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
EPHB4-204ENST00000477446 LPAP08519 4548 aa9.35□□□□□ -0.91
EPHB4-204ENST00000477446 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
EPHB4-204ENST00000477446 KRTAP13-3Q3SY46 172 aa9.32□□□□□ -0.92
EPHB4-204ENST00000477446 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
EPHB4-204ENST00000477446 LOC101927531A0A1B0GV80 90 aa9.3□□□□□ -0.92
EPHB4-204ENST00000477446 LRP2P98164 4655 aa9.3□□□□□ -0.92
EPHB4-204ENST00000477446 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
EPHB4-204ENST00000477446 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
EPHB4-204ENST00000477446 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
EPHB4-204ENST00000477446 Q5W150 140 aa9.22□□□□□ -0.93
EPHB4-204ENST00000477446 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
EPHB4-204ENST00000477446 XP32Q5T750 250 aa9.18□□□□□ -0.94
EPHB4-204ENST00000477446 C4orf26Q17RF5 130 aa9.13□□□□□ -0.95
EPHB4-204ENST00000477446 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
EPHB4-204ENST00000477446 V9GYY9 64 aa9.1□□□□□ -0.95
EPHB4-204ENST00000477446 Q1T7F1 81 aa9.09□□□□□ -0.95
EPHB4-204ENST00000477446 COA5Q86WW8 74 aa9.07□□□□□ -0.96
EPHB4-204ENST00000477446 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
EPHB4-204ENST00000477446 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
EPHB4-204ENST00000477446 RPL37P61927 97 aaKnown RBP9.03□□□□□ -0.96
EPHB4-204ENST00000477446 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
EPHB4-204ENST00000477446 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
EPHB4-204ENST00000477446 HRES1P13985 223 aa9.02□□□□□ -0.97
EPHB4-204ENST00000477446 ACYP2P14621 99 aa9.02□□□□□ -0.97
EPHB4-204ENST00000477446 Q75L30 129 aa9.01□□□□□ -0.97
EPHB4-204ENST00000477446 C20orf166-AS1Q96NR2 134 aa9.01□□□□□ -0.97
EPHB4-204ENST00000477446 A8MUU9 505 aa9□□□□□ -0.97
EPHB4-204ENST00000477446 DMAC1Q96GE9 116 aa8.98□□□□□ -0.97
EPHB4-204ENST00000477446 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.97
EPHB4-204ENST00000477446 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
EPHB4-204ENST00000477446 ATP11AUNQ6ZP68 121 aa8.92□□□□□ -0.98
EPHB4-204ENST00000477446 MUC2Q02817 5179 aa8.91□□□□□ -0.98
EPHB4-204ENST00000477446 KRTAP4-1Q9BYQ7 146 aa8.9□□□□□ -0.98
EPHB4-204ENST00000477446 CHKB-CPT1BH3BT56 60 aa8.86□□□□□ -0.99
EPHB4-204ENST00000477446 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
EPHB4-204ENST00000477446 A8MUN3 132 aa8.85□□□□□ -0.99
EPHB4-204ENST00000477446 PSPHP1O15172 72 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms