RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.02
USP16-205ENST00000474835 COL6A5A8TX70 2615 aa2.4□□□□□ -2.02
USP16-205ENST00000474835 LRP1Q07954 4544 aaKnown RBP2.4□□□□□ -2.02
USP16-205ENST00000474835 LINC01554Q52M75 96 aa2.4□□□□□ -2.03
USP16-205ENST00000474835 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
USP16-205ENST00000474835 KRTAP9-4Q9BYQ2 154 aa2.4□□□□□ -2.03
USP16-205ENST00000474835 XAGE1AQ9HD64 81 aa2.4□□□□□ -2.03
USP16-205ENST00000474835 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
USP16-205ENST00000474835 PRR15LQ9BU68 103 aa2.39□□□□□ -2.03
USP16-205ENST00000474835 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
USP16-205ENST00000474835 A8MUU9 505 aa2.39□□□□□ -2.03
USP16-205ENST00000474835 DEFB116Q30KQ4 102 aa2.39□□□□□ -2.03
USP16-205ENST00000474835 Q5W150 140 aa2.38□□□□□ -2.03
USP16-205ENST00000474835 KRTAP4-8A0A0G2JLE6 195 aa2.38□□□□□ -2.03
USP16-205ENST00000474835 CHKB-CPT1BH3BT56 60 aa2.38□□□□□ -2.03
USP16-205ENST00000474835 WFDC10BQ8IUB3 73 aa2.38□□□□□ -2.03
USP16-205ENST00000474835 ATRQ13535 2644 aa2.38□□□□□ -2.03
USP16-205ENST00000474835 ANGP03950 147 aaKnown RBP2.37□□□□□ -2.03
USP16-205ENST00000474835 KRTAP21-3Q3LHN1 58 aa2.37□□□□□ -2.03
USP16-205ENST00000474835 CASC2Q6XLA1 102 aa2.37□□□□□ -2.03
USP16-205ENST00000474835 KRTAP19-1Q8IUB9 90 aa2.37□□□□□ -2.03
USP16-205ENST00000474835 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
USP16-205ENST00000474835 NSD1Q96L73 2696 aaPredicted RBP2.36□□□□□ -2.03
USP16-205ENST00000474835 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
USP16-205ENST00000474835 DEFB123Q8N688 67 aa2.36□□□□□ -2.03
USP16-205ENST00000474835 INAFM1C9JVW0 142 aa2.36□□□□□ -2.03
USP16-205ENST00000474835 P0C880 135 aa2.36□□□□□ -2.03
USP16-205ENST00000474835 CASC10Q5T4H9 136 aa2.36□□□□□ -2.03
USP16-205ENST00000474835 C8orf17Q9NRJ1 99 aa2.36□□□□□ -2.03
USP16-205ENST00000474835 REG3GQ6UW15 175 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 NKAPP1Q8N9T2 125 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 FAT1Q14517 4588 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 NOTCH2Q04721 2471 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 A0A087WSZ3 146 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 DEFB4AO15263 64 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 WWC2-AS2Q96NR7 200 aa2.35□□□□□ -2.03
USP16-205ENST00000474835 MP68P56378 58 aa2.34□□□□□ -2.03
USP16-205ENST00000474835 A0A1B0GVX0 72 aa2.34□□□□□ -2.03
USP16-205ENST00000474835 Q6ZRN7 208 aaPredicted RBP2.34□□□□□ -2.03
USP16-205ENST00000474835 IGLV7-43P04211 117 aa2.34□□□□□ -2.04
USP16-205ENST00000474835 CAMK2N2Q96S95 79 aa2.34□□□□□ -2.04
USP16-205ENST00000474835 KRTAP10-9P60411 292 aa2.33□□□□□ -2.04
USP16-205ENST00000474835 PRAC1Q96KF2 57 aa2.33□□□□□ -2.04
USP16-205ENST00000474835 DEFB113Q30KQ7 82 aa2.33□□□□□ -2.04
USP16-205ENST00000474835 H0YAA0 97 aa2.32□□□□□ -2.04
USP16-205ENST00000474835 IGKV2-30P06310 120 aa2.32□□□□□ -2.04
USP16-205ENST00000474835 KRTAP15-1Q3LI76 137 aa2.32□□□□□ -2.04
USP16-205ENST00000474835 DYNC1H1Q14204 4646 aaKnown RBP2.32□□□□□ -2.04
USP16-205ENST00000474835 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
USP16-205ENST00000474835 K7EIL1 84 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 KRTAP1-5Q9BYS1 174 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 IGLV5-52A0A0A0MRZ9 124 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 A6NED7 52 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 H3BS24 57 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 DEFB130BP0DP73 79 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 DEFB130AP0DP74 79 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 MRPL34Q9BQ48 92 aaKnown RBP2.31□□□□□ -2.04
USP16-205ENST00000474835 STAB1Q9NY15 2570 aa2.31□□□□□ -2.04
USP16-205ENST00000474835 ROMO1P60602 79 aa2.3□□□□□ -2.04
USP16-205ENST00000474835 A0A096LNI7 61 aa2.3□□□□□ -2.04
USP16-205ENST00000474835 SPART-AS1P0CW21 52 aa2.3□□□□□ -2.04
USP16-205ENST00000474835 SPAG11AQ6PDA7 123 aa2.3□□□□□ -2.04
USP16-205ENST00000474835 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
USP16-205ENST00000474835 IGHV6-1A0A0B4J1U7 121 aa2.29□□□□□ -2.04
USP16-205ENST00000474835 Q6ZSA8 131 aa2.29□□□□□ -2.04
USP16-205ENST00000474835 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
USP16-205ENST00000474835 KRTAP3-1Q9BYR8 98 aa2.29□□□□□ -2.04
USP16-205ENST00000474835 WFDC13Q8IUB5 93 aa2.29□□□□□ -2.04
USP16-205ENST00000474835 IGKV2D-30A0A075B6S6 120 aa2.28□□□□□ -2.04
USP16-205ENST00000474835 KRTAP10-11P60412 298 aa2.28□□□□□ -2.04
USP16-205ENST00000474835 SPACA4Q8TDM5 124 aa2.28□□□□□ -2.04
USP16-205ENST00000474835 PANO1I0J062 215 aa2.28□□□□□ -2.04
USP16-205ENST00000474835 FASNP49327 2511 aaKnown RBP2.28□□□□□ -2.04
USP16-205ENST00000474835 LCE1DQ5T752 114 aa2.28□□□□□ -2.04
USP16-205ENST00000474835 SPTSSBQ8NFR3 76 aa2.28□□□□□ -2.04
USP16-205ENST00000474835 CSAG1Q6PB30 78 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 TGP01266 2768 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 FLG2Q5D862 2391 aaPredicted RBP2.26□□□□□ -2.05
USP16-205ENST00000474835 FAM229AH3BQW9 127 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 DEFB135Q30KP9 77 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 KRTAP4-9Q9BYQ8 210 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 STAB2Q8WWQ8 2551 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 ACYP2P14621 99 aa2.26□□□□□ -2.05
USP16-205ENST00000474835 RETNLBQ9BQ08 111 aa2.25□□□□□ -2.05
USP16-205ENST00000474835 A0A087WTM6 91 aa2.24□□□□□ -2.05
USP16-205ENST00000474835 PRLHP81277 87 aa2.24□□□□□ -2.05
USP16-205ENST00000474835 LY6G6CO95867 125 aa2.24□□□□□ -2.05
USP16-205ENST00000474835 MIR22HGQ0VDD5 57 aa2.24□□□□□ -2.05
USP16-205ENST00000474835 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
USP16-205ENST00000474835 UQCR11O14957 56 aa2.22□□□□□ -2.05
USP16-205ENST00000474835 KRTAP10-6P60371 365 aaPredicted RBP2.22□□□□□ -2.05
USP16-205ENST00000474835 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
USP16-205ENST00000474835 PCOTHQ58A44 107 aa2.21□□□□□ -2.06
USP16-205ENST00000474835 DNHD1Q96M86 4753 aa2.21□□□□□ -2.06
USP16-205ENST00000474835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.21□□□□□ -2.06
USP16-205ENST00000474835 HTN3P15516 51 aa2.21□□□□□ -2.06
USP16-205ENST00000474835 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
USP16-205ENST00000474835 KRTAP1-4P0C5Y4 121 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms