RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 A0A1B0GV72 72 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 H3BMG7 143 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 TRACP01848 142 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 Q6JHZ5 121 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 IGFL1Q6UW32 110 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 PRO0461Q9UI25 63 aa3.78□□□□□ -1.8
SCN9A-206ENST00000472119 IGLV7-46A0A075B6I9 117 aa3.77□□□□□ -1.81
SCN9A-206ENST00000472119 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
SCN9A-206ENST00000472119 A8MU10 97 aa3.77□□□□□ -1.81
SCN9A-206ENST00000472119 TMEM256-PLSCR3K7ERE1 68 aa3.77□□□□□ -1.81
SCN9A-206ENST00000472119 RPS29P62273 56 aaKnown RBP3.77□□□□□ -1.81
SCN9A-206ENST00000472119 CD164Q04900 197 aa3.77□□□□□ -1.81
SCN9A-206ENST00000472119 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
SCN9A-206ENST00000472119 BAALC-AS2P0C853 105 aa3.76□□□□□ -1.81
SCN9A-206ENST00000472119 LPAP08519 4548 aa3.76□□□□□ -1.81
SCN9A-206ENST00000472119 H3BQ85 93 aa3.75□□□□□ -1.81
SCN9A-206ENST00000472119 LYRM7Q5U5X0 104 aa3.75□□□□□ -1.81
SCN9A-206ENST00000472119 LIMD2Q9BT23 127 aa3.75□□□□□ -1.81
SCN9A-206ENST00000472119 TRBV20-1A0A075B6N2 111 aa3.74□□□□□ -1.81
SCN9A-206ENST00000472119 TRBV7-7A0A0K0K1E9 115 aa3.74□□□□□ -1.81
SCN9A-206ENST00000472119 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
SCN9A-206ENST00000472119 UBE2V1Q13404 147 aa3.74□□□□□ -1.81
SCN9A-206ENST00000472119 COL5A1-AS1Q5SY13 56 aa3.74□□□□□ -1.81
SCN9A-206ENST00000472119 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
SCN9A-206ENST00000472119 ANKRD29Q8N6D5 301 aa3.74□□□□□ -1.81
SCN9A-206ENST00000472119 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
SCN9A-206ENST00000472119 C9JAW5 83 aa3.73□□□□□ -1.81
SCN9A-206ENST00000472119 LRP2P98164 4655 aa3.73□□□□□ -1.81
SCN9A-206ENST00000472119 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
SCN9A-206ENST00000472119 C1orf195Q5TG92 126 aa3.72□□□□□ -1.81
SCN9A-206ENST00000472119 Q5XG85 94 aa3.72□□□□□ -1.81
SCN9A-206ENST00000472119 TEN1Q86WV5 123 aa3.72□□□□□ -1.81
SCN9A-206ENST00000472119 MTURNQ8N3F0 131 aa3.72□□□□□ -1.81
SCN9A-206ENST00000472119 A0A087WSZ3 146 aa3.71□□□□□ -1.82
SCN9A-206ENST00000472119 TPRXLQ17RH7 258 aa3.71□□□□□ -1.82
SCN9A-206ENST00000472119 Q6Q795 121 aa3.71□□□□□ -1.82
SCN9A-206ENST00000472119 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
SCN9A-206ENST00000472119 CCKP06307 115 aa3.7□□□□□ -1.82
SCN9A-206ENST00000472119 PCP4P48539 62 aa3.7□□□□□ -1.82
SCN9A-206ENST00000472119 DSCR8Q96T75 97 aa3.7□□□□□ -1.82
SCN9A-206ENST00000472119 VPS25Q9BRG1 176 aa3.7□□□□□ -1.82
SCN9A-206ENST00000472119 TRBV7-4A0A0J9YYF1 115 aa3.69□□□□□ -1.82
SCN9A-206ENST00000472119 ASB16-AS1Q495Z4 193 aa3.69□□□□□ -1.82
SCN9A-206ENST00000472119 C9orf92A6NGG3 77 aa3.68□□□□□ -1.82
SCN9A-206ENST00000472119 JMJD7-PLA2G4BH0Y9G9 81 aa3.68□□□□□ -1.82
SCN9A-206ENST00000472119 SS18L2Q9UHA2 77 aa3.68□□□□□ -1.82
SCN9A-206ENST00000472119 H3BT86 120 aa3.67□□□□□ -1.82
SCN9A-206ENST00000472119 K7EP34 96 aa3.67□□□□□ -1.82
SCN9A-206ENST00000472119 C14orf132Q9NPU4 83 aa3.67□□□□□ -1.82
SCN9A-206ENST00000472119 Q6ZQT0 140 aa3.66□□□□□ -1.82
SCN9A-206ENST00000472119 OBSCN-AS1Q96MR7 158 aa3.66□□□□□ -1.82
SCN9A-206ENST00000472119 Q96NJ1 140 aa3.66□□□□□ -1.82
SCN9A-206ENST00000472119 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
SCN9A-206ENST00000472119 LOC110117498A0A087WWA1 95 aa3.65□□□□□ -1.83
SCN9A-206ENST00000472119 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.83
SCN9A-206ENST00000472119 PDE6GP18545 87 aa3.64□□□□□ -1.83
SCN9A-206ENST00000472119 GTF2H5Q6ZYL4 71 aa3.64□□□□□ -1.83
SCN9A-206ENST00000472119 IGKV4-1P06312 121 aa3.63□□□□□ -1.83
SCN9A-206ENST00000472119 SIGMAR1Q99720 223 aa3.63□□□□□ -1.83
SCN9A-206ENST00000472119 LINC00472Q9H8W2 130 aa3.63□□□□□ -1.83
SCN9A-206ENST00000472119 A0A1B0GW54 56 aa3.6□□□□□ -1.83
SCN9A-206ENST00000472119 F8W1H4 67 aa3.6□□□□□ -1.83
SCN9A-206ENST00000472119 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
SCN9A-206ENST00000472119 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
SCN9A-206ENST00000472119 NREPQ16612 68 aa3.59□□□□□ -1.83
SCN9A-206ENST00000472119 ETDBQ3ZM63 59 aa3.59□□□□□ -1.83
SCN9A-206ENST00000472119 PCOTHQ58A44 107 aa3.59□□□□□ -1.83
SCN9A-206ENST00000472119 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
SCN9A-206ENST00000472119 A0A1B0GV90 55 aa3.58□□□□□ -1.84
SCN9A-206ENST00000472119 LINC00313P59037 77 aa3.58□□□□□ -1.84
SCN9A-206ENST00000472119 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
SCN9A-206ENST00000472119 J3KT08 172 aa3.57□□□□□ -1.84
SCN9A-206ENST00000472119 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
SCN9A-206ENST00000472119 RNF213Q63HN8 5207 aa3.56□□□□□ -1.84
SCN9A-206ENST00000472119 A0A1B0GVX0 72 aa3.56□□□□□ -1.84
SCN9A-206ENST00000472119 IGKV3D-7A0A0C4DH55 119 aa3.55□□□□□ -1.84
SCN9A-206ENST00000472119 A8MWP4 228 aa3.55□□□□□ -1.84
SCN9A-206ENST00000472119 NDUFB1O75438 58 aa3.55□□□□□ -1.84
SCN9A-206ENST00000472119 Q6ZVQ6 151 aa3.55□□□□□ -1.84
SCN9A-206ENST00000472119 Q75L30 129 aa3.55□□□□□ -1.84
SCN9A-206ENST00000472119 MUC2Q02817 5179 aa3.54□□□□□ -1.84
SCN9A-206ENST00000472119 A8MUU9 505 aa3.54□□□□□ -1.84
SCN9A-206ENST00000472119 C20orf166-AS1Q96NR2 134 aa3.54□□□□□ -1.84
SCN9A-206ENST00000472119 LINC00846Q9NV44 126 aa3.54□□□□□ -1.84
SCN9A-206ENST00000472119 C8orf87E5RJ46 101 aa3.53□□□□□ -1.84
SCN9A-206ENST00000472119 BPY2O14599 106 aa3.53□□□□□ -1.84
SCN9A-206ENST00000472119 ATP11AUNQ6ZP68 121 aa3.53□□□□□ -1.84
SCN9A-206ENST00000472119 PRR15Q8IV56 129 aa3.53□□□□□ -1.84
SCN9A-206ENST00000472119 UBL5Q9BZL1 73 aa3.52□□□□□ -1.85
SCN9A-206ENST00000472119 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
SCN9A-206ENST00000472119 K7EQZ3 153 aa3.51□□□□□ -1.85
SCN9A-206ENST00000472119 Q8N9L7 120 aa3.51□□□□□ -1.85
SCN9A-206ENST00000472119 A0A0U1RQV1 116 aa3.49□□□□□ -1.85
SCN9A-206ENST00000472119 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
SCN9A-206ENST00000472119 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
SCN9A-206ENST00000472119 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
SCN9A-206ENST00000472119 TMEM254Q8TBM7 123 aa3.47□□□□□ -1.85
SCN9A-206ENST00000472119 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms