RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 RGPD2P0DJD1 1756 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 SCN11AQ9UI33 1791 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 KIAA0556O60303 1618 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 LRP6O75581 1613 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PAPPAQ13219 1627 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 KIF14Q15058 1648 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 NHSL1Q5SYE7 1610 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 MADDQ8WXG6 1647 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CCDC180Q9P1Z9 1646 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 EIF2AK4Q9P2K8 1649 aaKnown RBP0.08□□□□□ -2.4
PTCD3-209ENST00000472044 BIVM-ERCC5R4GMW8 1640 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PLXNB2O15031 1838 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PATJQ8NI35 1801 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ARFGEF1Q9Y6D6 1849 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 C3P01024 1663 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PLCH1Q4KWH8 1693 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 KIF21AQ7Z4S6 1674 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CFAP43Q8NDM7 1665 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 NFAT5O94916 1531 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ABCC6O95255 1503 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 CPS1P31327 1500 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 ATP7AQ04656 1500 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 FAT1Q14517 4588 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 UGGT2Q9NYU1 1516 aa0.08□□□□□ -2.4
PTCD3-209ENST00000472044 PDCD11Q14690 1871 aaKnown RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 UBR3Q6ZT12 1888 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 C4BP0C0L5 1744 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 UBR1Q8IWV7 1749 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 LRRIQ1Q96JM4 1722 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 MYO5CQ9NQX4 1742 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 NRXN2Q9P2S2 1712 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 ANKRD36A6QL64 1941 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 PLXNC1O60486 1568 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 DIP2AQ14689 1571 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 MYH4Q9Y623 1939 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 DNAH5Q8TE73 4624 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 PREX2Q70Z35 1606 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 ABCA6Q8N139 1617 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 IGLV5-48A0A075B6I7 105 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 SPTY2D1-AS1A0A0U1RR47 76 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 MMP24-AS1A0A0U1RRL7 71 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 CTXND1A0A1B0GTU2 59 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 A0A1B0GU69 56 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 LINC00959A0A1B0GUT2 108 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 SMIM27A0A1W2PRY6 76 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 C7orf77A4D0Y5 90 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 IGIPA6NJ69 53 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 IQCF6A8MYZ5 107 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 CHKB-CPT1BH3BT56 60 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 I3L3M4 83 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 GNGT2O14610 69 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 MT-ATP8P03928 68 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 MT1AP04731 61 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 IAPPP10997 89 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 FCER1GP30273 86 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 FAUP35544 74 aaKnown RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 RPS29P62273 56 aaKnown RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 GNGT1P63211 74 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 WFDC2Q14508 124 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 KLK9Q2XQG4 91 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 TDRG1Q3Y452 100 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 NCBP2-AS2Q69YL0 99 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 UBE2DNLQ8IWF7 75 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 MRPL34Q9BQ48 92 aaKnown RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 C20orf78Q9BR46 151 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 PRO3102Q9H379 93 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 ABRACLQ9P1F3 81 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 TIMM8BQ9Y5J9 83 aaPredicted RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 U3KQA8 63 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 FOCADQ5VW36 1801 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 KIF1AQ12756 1690 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 ALS2Q96Q42 1657 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 AHNAKQ09666 5890 aaKnown RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 DNHD1Q96M86 4753 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 LY75O60449 1722 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 POLR1AO95602 1720 aaPredicted RBP0.07□□□□□ -2.4
PTCD3-209ENST00000472044 QSER1Q2KHR3 1735 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 ARAP2Q8WZ64 1704 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 CRYBG1Q9Y4K1 1723 aa0.07□□□□□ -2.4
PTCD3-209ENST00000472044 SSC5DA1L4H1 1573 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 ABCC8Q09428 1581 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 IQGAP2Q13576 1575 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 LTN1O94822 1766 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 AKAP12Q02952 1782 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 PAPPA2Q9BXP8 1791 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 DYNC1H1Q14204 4646 aaKnown RBP0.06□□□□□ -2.4
PTCD3-209ENST00000472044 PIK3C2BO00750 1634 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 NESP48681 1621 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 IQGAP3Q86VI3 1631 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 LRP2P98164 4655 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 C5P01031 1676 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 PREX1Q8TCU6 1659 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 FAM208AQ9UK61 1670 aaKnown RBP0.06□□□□□ -2.4
PTCD3-209ENST00000472044 ROBO1Q9Y6N7 1651 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 FAM223BA6NKX1 122 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 G3V318 75 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 H3BUT2 72 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 H3BUX3 64 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 M0R3E3 92 aa0.06□□□□□ -2.4
PTCD3-209ENST00000472044 NDUFA4O00483 81 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms