RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 APCP25054 2843 aa7.2□□□□□ -1.26
PCCB-210ENST00000471595 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
PCCB-210ENST00000471595 ZZEF1O43149 2961 aa7.18□□□□□ -1.26
PCCB-210ENST00000471595 SPTBN5Q9NRC6 3674 aaKnown RBP7.18□□□□□ -1.26
PCCB-210ENST00000471595 A8MU10 97 aa7.18□□□□□ -1.26
PCCB-210ENST00000471595 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
PCCB-210ENST00000471595 HIVEP1P15822 2718 aa7.15□□□□□ -1.26
PCCB-210ENST00000471595 HRNRQ86YZ3 2850 aaPredicted RBP7.15□□□□□ -1.26
PCCB-210ENST00000471595 A8MUU9 505 aa7.15□□□□□ -1.26
PCCB-210ENST00000471595 EYSQ5T1H1 3165 aa7.15□□□□□ -1.26
PCCB-210ENST00000471595 NIPBLQ6KC79 2804 aaeCLIP7.15□□□□□ -1.26
PCCB-210ENST00000471595 TNRC18O15417 2968 aaPredicted RBP7.14□□□□□ -1.27
PCCB-210ENST00000471595 C20orf166-AS1Q96NR2 134 aa7.14□□□□□ -1.27
PCCB-210ENST00000471595 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
PCCB-210ENST00000471595 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
PCCB-210ENST00000471595 REV3LO60673 3130 aa7.08□□□□□ -1.28
PCCB-210ENST00000471595 ZANQ9Y493 2812 aa7.07□□□□□ -1.28
PCCB-210ENST00000471595 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
PCCB-210ENST00000471595 USP34Q70CQ2 3546 aa7.06□□□□□ -1.28
PCCB-210ENST00000471595 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
PCCB-210ENST00000471595 KRTAP1-4P0C5Y4 121 aa7.05□□□□□ -1.28
PCCB-210ENST00000471595 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
PCCB-210ENST00000471595 SPEGQ15772 3267 aa7.03□□□□□ -1.28
PCCB-210ENST00000471595 CFAP47Q6ZTR5 3102 aa7.02□□□□□ -1.28
PCCB-210ENST00000471595 DMXL1Q9Y485 3027 aa7.02□□□□□ -1.29
PCCB-210ENST00000471595 DCHS2Q6V1P9 2916 aa6.96□□□□□ -1.3
PCCB-210ENST00000471595 LOC400499M0QZD8 3231 aa6.96□□□□□ -1.3
PCCB-210ENST00000471595 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
PCCB-210ENST00000471595 FBN2P35556 2912 aa6.89□□□□□ -1.31
PCCB-210ENST00000471595 XP32Q5T750 250 aa6.87□□□□□ -1.31
PCCB-210ENST00000471595 H0YAA0 97 aa6.85□□□□□ -1.31
PCCB-210ENST00000471595 TENM4Q6N022 2769 aa6.85□□□□□ -1.31
PCCB-210ENST00000471595 NF1P21359 2839 aa6.83□□□□□ -1.32
PCCB-210ENST00000471595 CRYBG3Q68DQ2 2970 aa6.83□□□□□ -1.32
PCCB-210ENST00000471595 KRTAP13-3Q3SY46 172 aa6.81□□□□□ -1.32
PCCB-210ENST00000471595 NDUFAF8A1L188 74 aa6.81□□□□□ -1.32
PCCB-210ENST00000471595 TNP1P09430 55 aa6.8□□□□□ -1.32
PCCB-210ENST00000471595 MXRA5Q9NR99 2828 aa6.78□□□□□ -1.32
PCCB-210ENST00000471595 MYO15AQ9UKN7 3530 aa6.75□□□□□ -1.33
PCCB-210ENST00000471595 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
PCCB-210ENST00000471595 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
PCCB-210ENST00000471595 CELSR1Q9NYQ6 3014 aa6.7□□□□□ -1.34
PCCB-210ENST00000471595 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
PCCB-210ENST00000471595 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
PCCB-210ENST00000471595 RELNP78509 3460 aa6.62□□□□□ -1.35
PCCB-210ENST00000471595 P0C880 135 aa6.61□□□□□ -1.35
PCCB-210ENST00000471595 A0A1B0GVY2 172 aa6.59□□□□□ -1.35
PCCB-210ENST00000471595 KRTAP10-8P60410 259 aa6.59□□□□□ -1.36
PCCB-210ENST00000471595 PDZD2O15018 2839 aa6.58□□□□□ -1.36
PCCB-210ENST00000471595 WDFY3Q8IZQ1 3526 aa6.57□□□□□ -1.36
PCCB-210ENST00000471595 TGP01266 2768 aa6.57□□□□□ -1.36
PCCB-210ENST00000471595 TENM1Q9UKZ4 2725 aa6.55□□□□□ -1.36
PCCB-210ENST00000471595 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
PCCB-210ENST00000471595 ZFHX4Q86UP3 3567 aa6.49□□□□□ -1.37
PCCB-210ENST00000471595 ASPMQ8IZT6 3477 aa6.48□□□□□ -1.37
PCCB-210ENST00000471595 DCHS1Q96JQ0 3298 aa6.45□□□□□ -1.38
PCCB-210ENST00000471595 LAMA5O15230 3695 aa6.42□□□□□ -1.38
PCCB-210ENST00000471595 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
PCCB-210ENST00000471595 CSMD1Q96PZ7 3565 aa6.4□□□□□ -1.38
PCCB-210ENST00000471595 KRTAP12-2P59991 146 aa6.4□□□□□ -1.39
PCCB-210ENST00000471595 ANK3Q12955 4377 aaKnown RBP6.37□□□□□ -1.39
PCCB-210ENST00000471595 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
PCCB-210ENST00000471595 SMG1Q96Q15 3661 aaKnown RBP6.35□□□□□ -1.39
PCCB-210ENST00000471595 OTOGQ6ZRI0 2925 aa6.33□□□□□ -1.4
PCCB-210ENST00000471595 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
PCCB-210ENST00000471595 DMDP11532 3685 aa6.32□□□□□ -1.4
PCCB-210ENST00000471595 VWFP04275 2813 aa6.31□□□□□ -1.4
PCCB-210ENST00000471595 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
PCCB-210ENST00000471595 NBPF19A0A087WUL8 3843 aa6.29□□□□□ -1.4
PCCB-210ENST00000471595 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
PCCB-210ENST00000471595 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
PCCB-210ENST00000471595 KRTAP10-6P60371 365 aaPredicted RBP6.23□□□□□ -1.41
PCCB-210ENST00000471595 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.41
PCCB-210ENST00000471595 MUC3AQ02505 3323 aa6.17□□□□□ -1.42
PCCB-210ENST00000471595 SVEP1Q4LDE5 3571 aa6.15□□□□□ -1.43
PCCB-210ENST00000471595 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
PCCB-210ENST00000471595 BSNQ9UPA5 3926 aa6.09□□□□□ -1.43
PCCB-210ENST00000471595 SPENQ96T58 3664 aaKnown RBP6.09□□□□□ -1.43
PCCB-210ENST00000471595 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
PCCB-210ENST00000471595 TRRAPQ9Y4A5 3859 aa6.03□□□□□ -1.44
PCCB-210ENST00000471595 KRTAP3-3Q9BYR6 98 aa6.03□□□□□ -1.44
PCCB-210ENST00000471595 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
PCCB-210ENST00000471595 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
PCCB-210ENST00000471595 HUWE1Q7Z6Z7 4374 aaKnown RBP6.01□□□□□ -1.45
PCCB-210ENST00000471595 ZFHX3Q15911 3703 aa6.01□□□□□ -1.45
PCCB-210ENST00000471595 KRTAP10-4P60372 401 aaPredicted RBP6□□□□□ -1.45
PCCB-210ENST00000471595 CSMD2Q7Z408 3487 aa5.99□□□□□ -1.45
PCCB-210ENST00000471595 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
PCCB-210ENST00000471595 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
PCCB-210ENST00000471595 CUBNO60494 3623 aa5.87□□□□□ -1.47
PCCB-210ENST00000471595 COL7A1Q02388 2944 aa5.82□□□□□ -1.48
PCCB-210ENST00000471595 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
PCCB-210ENST00000471595 ALMS1Q8TCU4 4167 aa5.8□□□□□ -1.48
PCCB-210ENST00000471595 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
PCCB-210ENST00000471595 DNAH9Q9NYC9 4486 aa5.7□□□□□ -1.5
PCCB-210ENST00000471595 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
PCCB-210ENST00000471595 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
PCCB-210ENST00000471595 INE1O15225 51 aa5.65□□□□□ -1.5
PCCB-210ENST00000471595 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
PCCB-210ENST00000471595 DNAH1Q9P2D7 4330 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 2962.7 ms