RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 WIZO95785 1651 aa-0.13□□□□□ -2.43
SMC5-202ENST00000471372 H0YAA0 97 aa-0.13□□□□□ -2.43
SMC5-202ENST00000471372 H3BVH4 76 aa-0.13□□□□□ -2.43
SMC5-202ENST00000471372 APOBP04114 4563 aaKnown RBP-0.13□□□□□ -2.43
SMC5-202ENST00000471372 TRRAPQ9Y4A5 3859 aa-0.13□□□□□ -2.43
SMC5-202ENST00000471372 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.14□□□□□ -2.43
SMC5-202ENST00000471372 KALRNO60229 2985 aa-0.14□□□□□ -2.43
SMC5-202ENST00000471372 HTTP42858 3142 aa-0.14□□□□□ -2.43
SMC5-202ENST00000471372 SPTBN5Q9NRC6 3674 aaKnown RBP-0.14□□□□□ -2.43
SMC5-202ENST00000471372 FRYQ5TBA9 3013 aa-0.14□□□□□ -2.43
SMC5-202ENST00000471372 ITPR2Q14571 2701 aa-0.14□□□□□ -2.43
SMC5-202ENST00000471372 COL12A1Q99715 3063 aa-0.14□□□□□ -2.43
SMC5-202ENST00000471372 LAMA1P25391 3075 aa-0.15□□□□□ -2.43
SMC5-202ENST00000471372 PLXNC1O60486 1568 aa-0.15□□□□□ -2.43
SMC5-202ENST00000471372 RNF213Q63HN8 5207 aa-0.15□□□□□ -2.43
SMC5-202ENST00000471372 DNAH5Q8TE73 4624 aa-0.15□□□□□ -2.43
SMC5-202ENST00000471372 CEP250Q9BV73 2442 aa-0.15□□□□□ -2.43
SMC5-202ENST00000471372 MYO5CQ9NQX4 1742 aa-0.16□□□□□ -2.43
SMC5-202ENST00000471372 SRCAPQ6ZRS2 3230 aa-0.16□□□□□ -2.43
SMC5-202ENST00000471372 BPTFQ12830 3046 aa-0.16□□□□□ -2.44
SMC5-202ENST00000471372 DNAH17Q9UFH2 4485 aa-0.17□□□□□ -2.44
SMC5-202ENST00000471372 KRTAP19-7Q3SYF9 63 aa-0.17□□□□□ -2.44
SMC5-202ENST00000471372 IQGAP3Q86VI3 1631 aa-0.17□□□□□ -2.44
SMC5-202ENST00000471372 LMTK2Q8IWU2 1503 aa-0.18□□□□□ -2.44
SMC5-202ENST00000471372 CHD7Q9P2D1 2997 aa-0.18□□□□□ -2.44
SMC5-202ENST00000471372 SPENQ96T58 3664 aaKnown RBP-0.18□□□□□ -2.44
SMC5-202ENST00000471372 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.18□□□□□ -2.44
SMC5-202ENST00000471372 ATMQ13315 3056 aa-0.19□□□□□ -2.44
SMC5-202ENST00000471372 ADGRG4Q8IZF6 3080 aa-0.19□□□□□ -2.44
SMC5-202ENST00000471372 NEBP20929 6669 aa-0.19□□□□□ -2.44
SMC5-202ENST00000471372 DMXL2Q8TDJ6 3036 aa-0.2□□□□□ -2.44
SMC5-202ENST00000471372 H0YGG7 62 aa-0.2□□□□□ -2.44
SMC5-202ENST00000471372 SMCO4Q9NRQ5 59 aa-0.2□□□□□ -2.44
SMC5-202ENST00000471372 UGGT2Q9NYU1 1516 aa-0.2□□□□□ -2.44
SMC5-202ENST00000471372 LAMA3Q16787 3333 aa-0.2□□□□□ -2.44
SMC5-202ENST00000471372 KRTAP20-2Q3LI61 65 aa-0.21□□□□□ -2.44
SMC5-202ENST00000471372 DEPDC5O75140 1603 aa-0.21□□□□□ -2.44
SMC5-202ENST00000471372 DNAH10Q8IVF4 4471 aa-0.21□□□□□ -2.44
SMC5-202ENST00000471372 CSMD1Q96PZ7 3565 aa-0.22□□□□□ -2.44
SMC5-202ENST00000471372 SPRR2AP35326 72 aa-0.22□□□□□ -2.44
SMC5-202ENST00000471372 MT4P47944 62 aa-0.22□□□□□ -2.44
SMC5-202ENST00000471372 KRTAP19-8Q3LI54 63 aa-0.22□□□□□ -2.44
SMC5-202ENST00000471372 KRTAP6-2Q3LI66 62 aa-0.22□□□□□ -2.44
SMC5-202ENST00000471372 ABCA13Q86UQ4 5058 aa-0.22□□□□□ -2.44
SMC5-202ENST00000471372 SMG1Q96Q15 3661 aaKnown RBP-0.22□□□□□ -2.44
SMC5-202ENST00000471372 LAMA2P24043 3122 aaKnown RBP-0.22□□□□□ -2.45
SMC5-202ENST00000471372 CSMD2Q7Z408 3487 aa-0.23□□□□□ -2.45
SMC5-202ENST00000471372 RANBP2P49792 3224 aaKnown RBP-0.23□□□□□ -2.45
SMC5-202ENST00000471372 DEFB131BA0A096LNP1 70 aa-0.23□□□□□ -2.45
SMC5-202ENST00000471372 SPRR2EP22531 72 aa-0.23□□□□□ -2.45
SMC5-202ENST00000471372 ENHOQ6UWT2 76 aa-0.23□□□□□ -2.45
SMC5-202ENST00000471372 CRYBG3Q68DQ2 2970 aa-0.24□□□□□ -2.45
SMC5-202ENST00000471372 TJP1Q07157 1748 aa-0.24□□□□□ -2.45
SMC5-202ENST00000471372 PRUNE2Q8WUY3 3088 aa-0.24□□□□□ -2.45
SMC5-202ENST00000471372 CELSR3Q9NYQ7 3312 aa-0.24□□□□□ -2.45
SMC5-202ENST00000471372 RALGAPBQ86X10 1494 aa-0.24□□□□□ -2.45
SMC5-202ENST00000471372 ZFHX4Q86UP3 3567 aa-0.25□□□□□ -2.45
SMC5-202ENST00000471372 BOD1L1Q8NFC6 3051 aa-0.25□□□□□ -2.45
SMC5-202ENST00000471372 KCNQ1DNQ9H478 68 aa-0.25□□□□□ -2.45
SMC5-202ENST00000471372 HFM1A2PYH4 1435 aa-0.25□□□□□ -2.45
SMC5-202ENST00000471372 DIP2AQ14689 1571 aa-0.25□□□□□ -2.45
SMC5-202ENST00000471372 CENPEQ02224 2701 aa-0.25□□□□□ -2.45
SMC5-202ENST00000471372 MYO15AQ9UKN7 3530 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 EYSQ5T1H1 3165 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 LYNX1G3V0Z9 82 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 MT1AP04731 61 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 SPRR2FQ96RM1 72 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 HILPDAQ9Y5L2 63 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 CFAP54Q96N23 3096 aa-0.26□□□□□ -2.45
SMC5-202ENST00000471372 TRIOO75962 3097 aa-0.27□□□□□ -2.45
SMC5-202ENST00000471372 MGAQ8IWI9 3026 aa-0.27□□□□□ -2.45
SMC5-202ENST00000471372 PARP4Q9UKK3 1724 aaKnown RBP-0.27□□□□□ -2.45
SMC5-202ENST00000471372 PDCD5O14737 125 aa-0.27□□□□□ -2.45
SMC5-202ENST00000471372 UBL5Q9BZL1 73 aa-0.27□□□□□ -2.45
SMC5-202ENST00000471372 CDC42BPGQ6DT37 1551 aa-0.28□□□□□ -2.45
SMC5-202ENST00000471372 VPS13CQ709C8 3753 aa-0.28□□□□□ -2.45
SMC5-202ENST00000471372 ITSN1Q15811 1721 aa-0.28□□□□□ -2.45
SMC5-202ENST00000471372 FREM2Q5SZK8 3169 aa-0.29□□□□□ -2.46
SMC5-202ENST00000471372 DMDP11532 3685 aa-0.3□□□□□ -2.46
SMC5-202ENST00000471372 MRPL33O75394 65 aaKnown RBP-0.3□□□□□ -2.46
SMC5-202ENST00000471372 DUOX2Q9NRD8 1548 aa-0.3□□□□□ -2.46
SMC5-202ENST00000471372 FRYLO94915 3013 aa-0.31□□□□□ -2.46
SMC5-202ENST00000471372 DEFB130BP0DP73 79 aa-0.31□□□□□ -2.46
SMC5-202ENST00000471372 DEFB130AP0DP74 79 aa-0.31□□□□□ -2.46
SMC5-202ENST00000471372 MT1HP80294 61 aa-0.31□□□□□ -2.46
SMC5-202ENST00000471372 NRAPQ86VF7 1730 aa-0.31□□□□□ -2.46
SMC5-202ENST00000471372 RNF17Q9BXT8 1623 aaKnown RBP-0.31□□□□□ -2.46
SMC5-202ENST00000471372 IAPPP10997 89 aa-0.32□□□□□ -2.46
SMC5-202ENST00000471372 CRIP1P50238 77 aa-0.32□□□□□ -2.46
SMC5-202ENST00000471372 USP34Q70CQ2 3546 aa-0.33□□□□□ -2.46
SMC5-202ENST00000471372 WDFY3Q8IZQ1 3526 aa-0.33□□□□□ -2.46
SMC5-202ENST00000471372 ATXN8Q156A1 80 aa-0.33□□□□□ -2.46
SMC5-202ENST00000471372 KRTAP19-5Q3LI72 72 aa-0.33□□□□□ -2.46
SMC5-202ENST00000471372 ANKRD36CQ5JPF3 1778 aa-0.34□□□□□ -2.46
SMC5-202ENST00000471372 C9orf92A6NGG3 77 aa-0.35□□□□□ -2.47
SMC5-202ENST00000471372 PCNTO95613 3336 aa-0.35□□□□□ -2.47
SMC5-202ENST00000471372 SZT2Q5T011 3432 aa-0.35□□□□□ -2.47
SMC5-202ENST00000471372 CEP350Q5VT06 3117 aa-0.36□□□□□ -2.47
SMC5-202ENST00000471372 H3BNG1 76 aa-0.36□□□□□ -2.47
SMC5-202ENST00000471372 MT1XP80297 61 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms