RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 PP632Q6XCG6 107 aa3.65□□□□□ -1.83
CCDC144A-212ENST00000470068 DMXL1Q9Y485 3027 aa3.64□□□□□ -1.83
CCDC144A-212ENST00000470068 R4GN34 69 aa3.63□□□□□ -1.83
CCDC144A-212ENST00000470068 MXRA5Q9NR99 2828 aa3.61□□□□□ -1.83
CCDC144A-212ENST00000470068 DMXL2Q8TDJ6 3036 aa3.6□□□□□ -1.83
CCDC144A-212ENST00000470068 EYSQ5T1H1 3165 aa3.6□□□□□ -1.83
CCDC144A-212ENST00000470068 PANO1I0J062 215 aa3.59□□□□□ -1.83
CCDC144A-212ENST00000470068 ATMQ13315 3056 aa3.59□□□□□ -1.83
CCDC144A-212ENST00000470068 XIRP2A4UGR9 3374 aa3.59□□□□□ -1.84
CCDC144A-212ENST00000470068 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
CCDC144A-212ENST00000470068 NF1P21359 2839 aa3.58□□□□□ -1.84
CCDC144A-212ENST00000470068 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
CCDC144A-212ENST00000470068 PLAC4Q8WY50 150 aa3.58□□□□□ -1.84
CCDC144A-212ENST00000470068 VWFP04275 2813 aa3.57□□□□□ -1.84
CCDC144A-212ENST00000470068 BOD1L1Q8NFC6 3051 aa3.57□□□□□ -1.84
CCDC144A-212ENST00000470068 A0A0D9SG42 100 aa3.54□□□□□ -1.84
CCDC144A-212ENST00000470068 VPS13AQ96RL7 3174 aa3.54□□□□□ -1.84
CCDC144A-212ENST00000470068 A8MUU9 505 aa3.54□□□□□ -1.84
CCDC144A-212ENST00000470068 Q8NDZ9 215 aa3.54□□□□□ -1.84
CCDC144A-212ENST00000470068 LRBAP50851 2863 aa3.53□□□□□ -1.84
CCDC144A-212ENST00000470068 C20orf166-AS1Q96NR2 134 aa3.53□□□□□ -1.84
CCDC144A-212ENST00000470068 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
CCDC144A-212ENST00000470068 DCHS2Q6V1P9 2916 aa3.52□□□□□ -1.85
CCDC144A-212ENST00000470068 Q6ZRN7 208 aaPredicted RBP3.52□□□□□ -1.85
CCDC144A-212ENST00000470068 ZFHX3Q15911 3703 aa3.51□□□□□ -1.85
CCDC144A-212ENST00000470068 ZZEF1O43149 2961 aa3.51□□□□□ -1.85
CCDC144A-212ENST00000470068 CELSR1Q9NYQ6 3014 aa3.5□□□□□ -1.85
CCDC144A-212ENST00000470068 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
CCDC144A-212ENST00000470068 TNP1P09430 55 aa3.48□□□□□ -1.85
CCDC144A-212ENST00000470068 FREM2Q5SZK8 3169 aa3.47□□□□□ -1.85
CCDC144A-212ENST00000470068 ADM2Q7Z4H4 148 aa3.47□□□□□ -1.85
CCDC144A-212ENST00000470068 KRTAP1-5Q9BYS1 174 aa3.47□□□□□ -1.85
CCDC144A-212ENST00000470068 CELSR2Q9HCU4 2923 aa3.46□□□□□ -1.85
CCDC144A-212ENST00000470068 ADGRG4Q8IZF6 3080 aa3.45□□□□□ -1.86
CCDC144A-212ENST00000470068 KRTAP3-3Q9BYR6 98 aa3.44□□□□□ -1.86
CCDC144A-212ENST00000470068 KRTAP3-2Q9BYR7 98 aa3.44□□□□□ -1.86
CCDC144A-212ENST00000470068 PDZD2O15018 2839 aa3.43□□□□□ -1.86
CCDC144A-212ENST00000470068 DCHS1Q96JQ0 3298 aa3.42□□□□□ -1.86
CCDC144A-212ENST00000470068 FBN1P35555 2871 aaKnown RBP3.42□□□□□ -1.86
CCDC144A-212ENST00000470068 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
CCDC144A-212ENST00000470068 SPEGQ15772 3267 aa3.39□□□□□ -1.87
CCDC144A-212ENST00000470068 LOC400499M0QZD8 3231 aa3.38□□□□□ -1.87
CCDC144A-212ENST00000470068 KRTAP11-1Q8IUC1 163 aa3.38□□□□□ -1.87
CCDC144A-212ENST00000470068 H0YAA0 97 aa3.37□□□□□ -1.87
CCDC144A-212ENST00000470068 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
CCDC144A-212ENST00000470068 CDH23Q9H251 3354 aa3.34□□□□□ -1.87
CCDC144A-212ENST00000470068 KRTAP7-1Q8IUC3 87 aa3.34□□□□□ -1.87
CCDC144A-212ENST00000470068 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
CCDC144A-212ENST00000470068 A8MU10 97 aa3.34□□□□□ -1.87
CCDC144A-212ENST00000470068 OTOGQ6ZRI0 2925 aa3.34□□□□□ -1.88
CCDC144A-212ENST00000470068 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
CCDC144A-212ENST00000470068 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
CCDC144A-212ENST00000470068 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
CCDC144A-212ENST00000470068 ZANQ9Y493 2812 aa3.32□□□□□ -1.88
CCDC144A-212ENST00000470068 CELSR3Q9NYQ7 3312 aa3.31□□□□□ -1.88
CCDC144A-212ENST00000470068 KRTAP4-5Q9BYR2 181 aa3.29□□□□□ -1.88
CCDC144A-212ENST00000470068 KRTAP1-4P0C5Y4 121 aa3.26□□□□□ -1.89
CCDC144A-212ENST00000470068 XP32Q5T750 250 aa3.26□□□□□ -1.89
CCDC144A-212ENST00000470068 P0C880 135 aa3.25□□□□□ -1.89
CCDC144A-212ENST00000470068 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
CCDC144A-212ENST00000470068 NBPF19A0A087WUL8 3843 aa3.21□□□□□ -1.9
CCDC144A-212ENST00000470068 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
CCDC144A-212ENST00000470068 COL7A1Q02388 2944 aa3.2□□□□□ -1.9
CCDC144A-212ENST00000470068 USP34Q70CQ2 3546 aa3.17□□□□□ -1.9
CCDC144A-212ENST00000470068 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
CCDC144A-212ENST00000470068 LORP23490 312 aaPredicted RBP3.16□□□□□ -1.9
CCDC144A-212ENST00000470068 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
CCDC144A-212ENST00000470068 LCE2BO14633 110 aa3.15□□□□□ -1.91
CCDC144A-212ENST00000470068 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
CCDC144A-212ENST00000470068 ASPMQ8IZT6 3477 aa3.12□□□□□ -1.91
CCDC144A-212ENST00000470068 MYO15AQ9UKN7 3530 aa3.12□□□□□ -1.91
CCDC144A-212ENST00000470068 INE1O15225 51 aa3.11□□□□□ -1.91
CCDC144A-212ENST00000470068 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
CCDC144A-212ENST00000470068 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
CCDC144A-212ENST00000470068 DNAH14Q0VDD8 3507 aa3.09□□□□□ -1.92
CCDC144A-212ENST00000470068 ZFHX4Q86UP3 3567 aa3.08□□□□□ -1.92
CCDC144A-212ENST00000470068 KRTAP19-4Q3LI73 84 aa3.07□□□□□ -1.92
CCDC144A-212ENST00000470068 SPTBN5Q9NRC6 3674 aaKnown RBP3.05□□□□□ -1.92
CCDC144A-212ENST00000470068 LCE2CQ5TA81 110 aa3.04□□□□□ -1.92
CCDC144A-212ENST00000470068 MEGF8Q7Z7M0 2845 aa3.02□□□□□ -1.93
CCDC144A-212ENST00000470068 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
CCDC144A-212ENST00000470068 KRTAP9-2Q9BYQ4 174 aa3.01□□□□□ -1.93
CCDC144A-212ENST00000470068 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
CCDC144A-212ENST00000470068 MUC3AQ02505 3323 aa2.98□□□□□ -1.93
CCDC144A-212ENST00000470068 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
CCDC144A-212ENST00000470068 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
CCDC144A-212ENST00000470068 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
CCDC144A-212ENST00000470068 SMG1Q96Q15 3661 aaKnown RBP2.94□□□□□ -1.94
CCDC144A-212ENST00000470068 RELNP78509 3460 aa2.94□□□□□ -1.94
CCDC144A-212ENST00000470068 MT1HL1P0DM35 61 aa2.92□□□□□ -1.94
CCDC144A-212ENST00000470068 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
CCDC144A-212ENST00000470068 CSMD2Q7Z408 3487 aa2.87□□□□□ -1.95
CCDC144A-212ENST00000470068 RYR1P21817 5038 aa2.86□□□□□ -1.95
CCDC144A-212ENST00000470068 KRTAP10-6P60371 365 aaPredicted RBP2.86□□□□□ -1.95
CCDC144A-212ENST00000470068 KRTAP3-1Q9BYR8 98 aa2.85□□□□□ -1.95
CCDC144A-212ENST00000470068 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.95
CCDC144A-212ENST00000470068 CSMD1Q96PZ7 3565 aa2.84□□□□□ -1.96
CCDC144A-212ENST00000470068 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
CCDC144A-212ENST00000470068 HERC2O95714 4834 aa2.81□□□□□ -1.96
CCDC144A-212ENST00000470068 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms