RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 APCP25054 2843 aa9.21□□□□□ -0.94
BRAT1-204ENST00000469750 KRTAP29-1A8MX34 341 aaPredicted RBP9.2□□□□□ -0.94
BRAT1-204ENST00000469750 HIVEP1P15822 2718 aa9.2□□□□□ -0.94
BRAT1-204ENST00000469750 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
BRAT1-204ENST00000469750 RPL37P61927 97 aaKnown RBP9.17□□□□□ -0.94
BRAT1-204ENST00000469750 SPATA8Q6RVD6 105 aa9.16□□□□□ -0.94
BRAT1-204ENST00000469750 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
BRAT1-204ENST00000469750 CFAP47Q6ZTR5 3102 aa9.12□□□□□ -0.95
BRAT1-204ENST00000469750 KRTAP11-1Q8IUC1 163 aa9.12□□□□□ -0.95
BRAT1-204ENST00000469750 KRTAP25-1Q3LHN0 102 aa9.11□□□□□ -0.95
BRAT1-204ENST00000469750 H1FX-AS1Q4G0G2 97 aa9.11□□□□□ -0.95
BRAT1-204ENST00000469750 M0QZ58 72 aa9.11□□□□□ -0.95
BRAT1-204ENST00000469750 MUC3AQ02505 3323 aa9.09□□□□□ -0.95
BRAT1-204ENST00000469750 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
BRAT1-204ENST00000469750 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
BRAT1-204ENST00000469750 RPS29P62273 56 aaKnown RBP9.07□□□□□ -0.96
BRAT1-204ENST00000469750 KRTAP7-1Q8IUC3 87 aa9.06□□□□□ -0.96
BRAT1-204ENST00000469750 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
BRAT1-204ENST00000469750 CRYBG3Q68DQ2 2970 aa9.01□□□□□ -0.97
BRAT1-204ENST00000469750 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
BRAT1-204ENST00000469750 CELSR2Q9HCU4 2923 aa8.98□□□□□ -0.97
BRAT1-204ENST00000469750 KRTAP13-1Q8IUC0 172 aa8.97□□□□□ -0.97
BRAT1-204ENST00000469750 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.98
BRAT1-204ENST00000469750 NDUFAF8A1L188 74 aa8.96□□□□□ -0.98
BRAT1-204ENST00000469750 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
BRAT1-204ENST00000469750 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
BRAT1-204ENST00000469750 A8MU10 97 aa8.92□□□□□ -0.98
BRAT1-204ENST00000469750 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
BRAT1-204ENST00000469750 DMDP11532 3685 aa8.88□□□□□ -0.99
BRAT1-204ENST00000469750 RELNP78509 3460 aa8.88□□□□□ -0.99
BRAT1-204ENST00000469750 LAMA5O15230 3695 aa8.87□□□□□ -0.99
BRAT1-204ENST00000469750 DCHS1Q96JQ0 3298 aa8.85□□□□□ -0.99
BRAT1-204ENST00000469750 TENM4Q6N022 2769 aa8.84□□□□□ -0.99
BRAT1-204ENST00000469750 NF1P21359 2839 aa8.83□□□□□ -1
BRAT1-204ENST00000469750 DCHS2Q6V1P9 2916 aa8.83□□□□□ -1
BRAT1-204ENST00000469750 ASH1LQ9NR48 2969 aaKnown RBP8.81□□□□□ -1
BRAT1-204ENST00000469750 ASPMQ8IZT6 3477 aa8.79□□□□□ -1
BRAT1-204ENST00000469750 WDFY3Q8IZQ1 3526 aa8.78□□□□□ -1
BRAT1-204ENST00000469750 A8MUU9 505 aa8.77□□□□□ -1.01
BRAT1-204ENST00000469750 FBN2P35556 2912 aa8.76□□□□□ -1.01
BRAT1-204ENST00000469750 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
BRAT1-204ENST00000469750 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
BRAT1-204ENST00000469750 ZFHX4Q86UP3 3567 aa8.57□□□□□ -1.04
BRAT1-204ENST00000469750 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
BRAT1-204ENST00000469750 PDZD2O15018 2839 aa8.53□□□□□ -1.04
BRAT1-204ENST00000469750 XP32Q5T750 250 aa8.47□□□□□ -1.05
BRAT1-204ENST00000469750 SMG1Q96Q15 3661 aaKnown RBP8.46□□□□□ -1.06
BRAT1-204ENST00000469750 TNP1P09430 55 aa8.44□□□□□ -1.06
BRAT1-204ENST00000469750 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
BRAT1-204ENST00000469750 NBPF19A0A087WUL8 3843 aa8.38□□□□□ -1.07
BRAT1-204ENST00000469750 CELSR1Q9NYQ6 3014 aa8.38□□□□□ -1.07
BRAT1-204ENST00000469750 TENM3Q9P273 2699 aa8.37□□□□□ -1.07
BRAT1-204ENST00000469750 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
BRAT1-204ENST00000469750 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
BRAT1-204ENST00000469750 TPRXLQ17RH7 258 aa8.33□□□□□ -1.08
BRAT1-204ENST00000469750 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
BRAT1-204ENST00000469750 P0C880 135 aa8.26□□□□□ -1.09
BRAT1-204ENST00000469750 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
BRAT1-204ENST00000469750 A0A1B0GVY2 172 aa8.25□□□□□ -1.09
BRAT1-204ENST00000469750 TENM2Q9NT68 2774 aa8.23□□□□□ -1.09
BRAT1-204ENST00000469750 FBN1P35555 2871 aaKnown RBP8.23□□□□□ -1.09
BRAT1-204ENST00000469750 H0YAA0 97 aa8.22□□□□□ -1.09
BRAT1-204ENST00000469750 KRTAP10-8P60410 259 aa8.21□□□□□ -1.09
BRAT1-204ENST00000469750 KRTAP13-3Q3SY46 172 aa8.2□□□□□ -1.1
BRAT1-204ENST00000469750 SPENQ96T58 3664 aaKnown RBP8.19□□□□□ -1.1
BRAT1-204ENST00000469750 CSMD1Q96PZ7 3565 aa8.18□□□□□ -1.1
BRAT1-204ENST00000469750 VWFP04275 2813 aa8.16□□□□□ -1.1
BRAT1-204ENST00000469750 PKD1L1Q8TDX9 2849 aa8.16□□□□□ -1.1
BRAT1-204ENST00000469750 CSMD2Q7Z408 3487 aa8.14□□□□□ -1.11
BRAT1-204ENST00000469750 BSNQ9UPA5 3926 aa8.11□□□□□ -1.11
BRAT1-204ENST00000469750 SVEP1Q4LDE5 3571 aa8.1□□□□□ -1.11
BRAT1-204ENST00000469750 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
BRAT1-204ENST00000469750 TGP01266 2768 aa8.01□□□□□ -1.13
BRAT1-204ENST00000469750 PRO2289Q9P1D8 64 aa7.96□□□□□ -1.13
BRAT1-204ENST00000469750 ANK3Q12955 4377 aaKnown RBP7.96□□□□□ -1.14
BRAT1-204ENST00000469750 CUBNO60494 3623 aa7.85□□□□□ -1.15
BRAT1-204ENST00000469750 TRRAPQ9Y4A5 3859 aa7.82□□□□□ -1.16
BRAT1-204ENST00000469750 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
BRAT1-204ENST00000469750 FBN3Q75N90 2809 aa7.64□□□□□ -1.19
BRAT1-204ENST00000469750 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
BRAT1-204ENST00000469750 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
BRAT1-204ENST00000469750 VPS13CQ709C8 3753 aa7.58□□□□□ -1.2
BRAT1-204ENST00000469750 KRTAP12-1P59990 96 aa7.57□□□□□ -1.2
BRAT1-204ENST00000469750 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
BRAT1-204ENST00000469750 ZNF469Q96JG9 3925 aaPredicted RBP7.55□□□□□ -1.2
BRAT1-204ENST00000469750 COL7A1Q02388 2944 aa7.46□□□□□ -1.22
BRAT1-204ENST00000469750 MEGF8Q7Z7M0 2845 aa7.45□□□□□ -1.22
BRAT1-204ENST00000469750 AKAP9Q99996 3911 aa7.44□□□□□ -1.22
BRAT1-204ENST00000469750 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
BRAT1-204ENST00000469750 INE1O15225 51 aa7.39□□□□□ -1.23
BRAT1-204ENST00000469750 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
BRAT1-204ENST00000469750 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
BRAT1-204ENST00000469750 HUWE1Q7Z6Z7 4374 aaKnown RBP7.32□□□□□ -1.24
BRAT1-204ENST00000469750 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
BRAT1-204ENST00000469750 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
BRAT1-204ENST00000469750 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
BRAT1-204ENST00000469750 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
BRAT1-204ENST00000469750 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
BRAT1-204ENST00000469750 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
BRAT1-204ENST00000469750 KRTAP10-12P60413 245 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms