RNA–Protein interactions for RNA: ENST00000468552.1

EFCAB6-206, Transcript of EF-hand calcium binding domain 6, humanhuman

TSL 1 (best)

Gene EFCAB6, Length 5,120 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB6-206ENST00000468552 USP34Q70CQ2 3546 aa5.17□□□□□ -1.58
EFCAB6-206ENST00000468552 UTP20O75691 2785 aaKnown RBP5.15□□□□□ -1.58
EFCAB6-206ENST00000468552 ZANQ9Y493 2812 aa5.15□□□□□ -1.59
EFCAB6-206ENST00000468552 MUC3AQ02505 3323 aa5.14□□□□□ -1.59
EFCAB6-206ENST00000468552 Q5VSD8 79 aa5.12□□□□□ -1.59
EFCAB6-206ENST00000468552 KRTAP1-1Q07627 177 aa5.12□□□□□ -1.59
EFCAB6-206ENST00000468552 KRTAP1-3Q8IUG1 177 aa5.12□□□□□ -1.59
EFCAB6-206ENST00000468552 A8MUU9 505 aa5.11□□□□□ -1.59
EFCAB6-206ENST00000468552 TNP1P09430 55 aa5.1□□□□□ -1.59
EFCAB6-206ENST00000468552 A8MU10 97 aa5.1□□□□□ -1.59
EFCAB6-206ENST00000468552 KRTAP4-16G5E9R7 235 aaPredicted RBP5.1□□□□□ -1.59
EFCAB6-206ENST00000468552 RPS29P62273 56 aaKnown RBP5.09□□□□□ -1.59
EFCAB6-206ENST00000468552 CELSR2Q9HCU4 2923 aa5.09□□□□□ -1.59
EFCAB6-206ENST00000468552 LCE6AA0A183 80 aa5.08□□□□□ -1.6
EFCAB6-206ENST00000468552 DMBT1Q9UGM3 2413 aaPredicted RBP5.08□□□□□ -1.6
EFCAB6-206ENST00000468552 DCHS1Q96JQ0 3298 aa5.07□□□□□ -1.6
EFCAB6-206ENST00000468552 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
EFCAB6-206ENST00000468552 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
EFCAB6-206ENST00000468552 KRTAP10-1P60331 282 aa5.06□□□□□ -1.6
EFCAB6-206ENST00000468552 CRYBG3Q68DQ2 2970 aa5.05□□□□□ -1.6
EFCAB6-206ENST00000468552 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
EFCAB6-206ENST00000468552 NF1P21359 2839 aa5.05□□□□□ -1.6
EFCAB6-206ENST00000468552 WDFY3Q8IZQ1 3526 aa5.04□□□□□ -1.6
EFCAB6-206ENST00000468552 KRTAP1-5Q9BYS1 174 aa5.04□□□□□ -1.6
EFCAB6-206ENST00000468552 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
EFCAB6-206ENST00000468552 HIVEP1P15822 2718 aa5.03□□□□□ -1.61
EFCAB6-206ENST00000468552 DMDP11532 3685 aa5.03□□□□□ -1.61
EFCAB6-206ENST00000468552 ASPMQ8IZT6 3477 aa5.02□□□□□ -1.61
EFCAB6-206ENST00000468552 RELNP78509 3460 aa5.01□□□□□ -1.61
EFCAB6-206ENST00000468552 NIPBLQ6KC79 2804 aaeCLIP5.01□□□□□ -1.61
EFCAB6-206ENST00000468552 DCHS2Q6V1P9 2916 aa5.01□□□□□ -1.61
EFCAB6-206ENST00000468552 APCP25054 2843 aa5.01□□□□□ -1.61
EFCAB6-206ENST00000468552 STAB2Q8WWQ8 2551 aa5□□□□□ -1.61
EFCAB6-206ENST00000468552 LAMA5O15230 3695 aa4.99□□□□□ -1.61
EFCAB6-206ENST00000468552 KMT2BQ9UMN6 2715 aaPredicted RBP4.99□□□□□ -1.61
EFCAB6-206ENST00000468552 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
EFCAB6-206ENST00000468552 FBN2P35556 2912 aa4.99□□□□□ -1.61
EFCAB6-206ENST00000468552 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
EFCAB6-206ENST00000468552 HRNRQ86YZ3 2850 aaPredicted RBP4.9□□□□□ -1.63
EFCAB6-206ENST00000468552 P0C880 135 aa4.89□□□□□ -1.63
EFCAB6-206ENST00000468552 Q6ZRN7 208 aaPredicted RBP4.87□□□□□ -1.63
EFCAB6-206ENST00000468552 ZFHX4Q86UP3 3567 aa4.86□□□□□ -1.63
EFCAB6-206ENST00000468552 MXRA5Q9NR99 2828 aa4.84□□□□□ -1.63
EFCAB6-206ENST00000468552 BSNQ9UPA5 3926 aa4.82□□□□□ -1.64
EFCAB6-206ENST00000468552 KRTAP13-2Q52LG2 175 aa4.82□□□□□ -1.64
EFCAB6-206ENST00000468552 KRTAP13-1Q8IUC0 172 aa4.82□□□□□ -1.64
EFCAB6-206ENST00000468552 CELSR1Q9NYQ6 3014 aa4.8□□□□□ -1.64
EFCAB6-206ENST00000468552 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
EFCAB6-206ENST00000468552 KRTAP7-1Q8IUC3 87 aa4.76□□□□□ -1.65
EFCAB6-206ENST00000468552 SMG1Q96Q15 3661 aaKnown RBP4.74□□□□□ -1.65
EFCAB6-206ENST00000468552 SPENQ96T58 3664 aaKnown RBP4.73□□□□□ -1.65
EFCAB6-206ENST00000468552 H0YAA0 97 aa4.72□□□□□ -1.65
EFCAB6-206ENST00000468552 PKD1L1Q8TDX9 2849 aa4.72□□□□□ -1.65
EFCAB6-206ENST00000468552 CUBNO60494 3623 aa4.72□□□□□ -1.65
EFCAB6-206ENST00000468552 TENM3Q9P273 2699 aa4.71□□□□□ -1.65
EFCAB6-206ENST00000468552 FBN1P35555 2871 aaKnown RBP4.71□□□□□ -1.66
EFCAB6-206ENST00000468552 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
EFCAB6-206ENST00000468552 TENM1Q9UKZ4 2725 aa4.66□□□□□ -1.66
EFCAB6-206ENST00000468552 ZFHX3Q15911 3703 aa4.65□□□□□ -1.67
EFCAB6-206ENST00000468552 OTOGQ6ZRI0 2925 aa4.65□□□□□ -1.67
EFCAB6-206ENST00000468552 SVEP1Q4LDE5 3571 aa4.64□□□□□ -1.67
EFCAB6-206ENST00000468552 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
EFCAB6-206ENST00000468552 PDZD2O15018 2839 aa4.62□□□□□ -1.67
EFCAB6-206ENST00000468552 VWFP04275 2813 aa4.61□□□□□ -1.67
EFCAB6-206ENST00000468552 XP32Q5T750 250 aa4.61□□□□□ -1.67
EFCAB6-206ENST00000468552 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
EFCAB6-206ENST00000468552 A0A1B0GVY2 172 aa4.56□□□□□ -1.68
EFCAB6-206ENST00000468552 KRTAP10-10P60014 251 aa4.56□□□□□ -1.68
EFCAB6-206ENST00000468552 NBPF19A0A087WUL8 3843 aa4.55□□□□□ -1.68
EFCAB6-206ENST00000468552 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
EFCAB6-206ENST00000468552 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
EFCAB6-206ENST00000468552 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
EFCAB6-206ENST00000468552 KRTAP21-3Q3LHN1 58 aa4.52□□□□□ -1.69
EFCAB6-206ENST00000468552 TGP01266 2768 aa4.52□□□□□ -1.69
EFCAB6-206ENST00000468552 ANK3Q12955 4377 aaKnown RBP4.52□□□□□ -1.69
EFCAB6-206ENST00000468552 KRTAP1-4P0C5Y4 121 aa4.51□□□□□ -1.69
EFCAB6-206ENST00000468552 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
EFCAB6-206ENST00000468552 KRTAP12-2P59991 146 aa4.44□□□□□ -1.7
EFCAB6-206ENST00000468552 INE1O15225 51 aa4.42□□□□□ -1.7
EFCAB6-206ENST00000468552 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.7
EFCAB6-206ENST00000468552 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
EFCAB6-206ENST00000468552 AKAP9Q99996 3911 aa4.37□□□□□ -1.71
EFCAB6-206ENST00000468552 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.72
EFCAB6-206ENST00000468552 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
EFCAB6-206ENST00000468552 TRRAPQ9Y4A5 3859 aa4.32□□□□□ -1.72
EFCAB6-206ENST00000468552 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
EFCAB6-206ENST00000468552 FBN3Q75N90 2809 aa4.25□□□□□ -1.73
EFCAB6-206ENST00000468552 COL7A1Q02388 2944 aa4.21□□□□□ -1.74
EFCAB6-206ENST00000468552 HUWE1Q7Z6Z7 4374 aaKnown RBP4.13□□□□□ -1.75
EFCAB6-206ENST00000468552 MEGF8Q7Z7M0 2845 aa4.11□□□□□ -1.75
EFCAB6-206ENST00000468552 KRTAP3-1Q9BYR8 98 aa4.1□□□□□ -1.75
EFCAB6-206ENST00000468552 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
EFCAB6-206ENST00000468552 DNAH3Q8TD57 4116 aa4.08□□□□□ -1.76
EFCAB6-206ENST00000468552 CMYA5Q8N3K9 4069 aa4.06□□□□□ -1.76
EFCAB6-206ENST00000468552 ANK2Q01484 3957 aa4.04□□□□□ -1.76
EFCAB6-206ENST00000468552 DNAH9Q9NYC9 4486 aa4.03□□□□□ -1.76
EFCAB6-206ENST00000468552 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
EFCAB6-206ENST00000468552 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
EFCAB6-206ENST00000468552 CSMD3Q7Z407 3707 aa3.99□□□□□ -1.77
EFCAB6-206ENST00000468552 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms