RNA–Protein interactions for RNA: ENST00000468552.1

EFCAB6-206, Transcript of EF-hand calcium binding domain 6, humanhuman

TSL 1 (best)

Gene EFCAB6, Length 5,120 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB6-206ENST00000468552 PELP1Q8IZL8 1130 aaKnown RBP14.64□□□□□ -0.07
EFCAB6-206ENST00000468552 DCAF8L2P0C7V8 631 aa14.27□□□□□ -0.12
EFCAB6-206ENST00000468552 NISCHQ9Y2I1 1504 aa14.2□□□□□ -0.14
EFCAB6-206ENST00000468552 MYT1Q01538 1121 aa13.98□□□□□ -0.17
EFCAB6-206ENST00000468552 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
EFCAB6-206ENST00000468552 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
EFCAB6-206ENST00000468552 SUPT5HO00267 1087 aaKnown RBP13.7□□□□□ -0.22
EFCAB6-206ENST00000468552 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
EFCAB6-206ENST00000468552 APLP2Q06481 763 aa13.64□□□□□ -0.23
EFCAB6-206ENST00000468552 FAM9AQ8IZU1 332 aaPredicted RBP13.44□□□□□ -0.26
EFCAB6-206ENST00000468552 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
EFCAB6-206ENST00000468552 NEFLP07196 543 aa13.43□□□□□ -0.26
EFCAB6-206ENST00000468552 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
EFCAB6-206ENST00000468552 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
EFCAB6-206ENST00000468552 PCGF6Q9BYE7 350 aa13.23□□□□□ -0.29
EFCAB6-206ENST00000468552 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
EFCAB6-206ENST00000468552 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
EFCAB6-206ENST00000468552 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
EFCAB6-206ENST00000468552 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
EFCAB6-206ENST00000468552 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
EFCAB6-206ENST00000468552 ATP1B4Q9UN42 357 aaPredicted RBP12.82□□□□□ -0.36
EFCAB6-206ENST00000468552 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
EFCAB6-206ENST00000468552 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
EFCAB6-206ENST00000468552 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.38
EFCAB6-206ENST00000468552 CLSPNQ9HAW4 1339 aa12.69□□□□□ -0.38
EFCAB6-206ENST00000468552 HRCP23327 699 aa12.62□□□□□ -0.39
EFCAB6-206ENST00000468552 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
EFCAB6-206ENST00000468552 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
EFCAB6-206ENST00000468552 GLIPR1L2Q4G1C9 344 aa12.5□□□□□ -0.41
EFCAB6-206ENST00000468552 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
EFCAB6-206ENST00000468552 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
EFCAB6-206ENST00000468552 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
EFCAB6-206ENST00000468552 DIEXFQ68CQ4 756 aaKnown RBP12.38□□□□□ -0.43
EFCAB6-206ENST00000468552 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
EFCAB6-206ENST00000468552 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
EFCAB6-206ENST00000468552 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
EFCAB6-206ENST00000468552 ITGAEP38570 1179 aa12.35□□□□□ -0.43
EFCAB6-206ENST00000468552 EIF5BO60841 1220 aaKnown RBP12.35□□□□□ -0.43
EFCAB6-206ENST00000468552 PPARGC1BQ86YN6 1023 aaKnown RBP12.34□□□□□ -0.43
EFCAB6-206ENST00000468552 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
EFCAB6-206ENST00000468552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
EFCAB6-206ENST00000468552 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
EFCAB6-206ENST00000468552 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
EFCAB6-206ENST00000468552 CCDC180Q9P1Z9 1646 aa12.24□□□□□ -0.45
EFCAB6-206ENST00000468552 BCANQ96GW7 911 aa12.24□□□□□ -0.45
EFCAB6-206ENST00000468552 ANP32CO43423 234 aa12.22□□□□□ -0.45
EFCAB6-206ENST00000468552 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
EFCAB6-206ENST00000468552 NEFMP07197 916 aa12.15□□□□□ -0.47
EFCAB6-206ENST00000468552 HSP90AA1P07900 732 aaKnown RBP12.1□□□□□ -0.47
EFCAB6-206ENST00000468552 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
EFCAB6-206ENST00000468552 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
EFCAB6-206ENST00000468552 TRIM52Q96A61 297 aa12.06□□□□□ -0.48
EFCAB6-206ENST00000468552 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
EFCAB6-206ENST00000468552 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
EFCAB6-206ENST00000468552 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
EFCAB6-206ENST00000468552 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
EFCAB6-206ENST00000468552 FAM50AQ14320 339 aaKnown RBP12□□□□□ -0.49
EFCAB6-206ENST00000468552 BCL11AQ9H165 835 aa12□□□□□ -0.49
EFCAB6-206ENST00000468552 NEUROD1Q13562 356 aa12□□□□□ -0.49
EFCAB6-206ENST00000468552 CDK11BP21127 795 aaKnown RBP11.99□□□□□ -0.49
EFCAB6-206ENST00000468552 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
EFCAB6-206ENST00000468552 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
EFCAB6-206ENST00000468552 ZNF326Q5BKZ1 582 aaKnown RBP11.93□□□□□ -0.5
EFCAB6-206ENST00000468552 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
EFCAB6-206ENST00000468552 FKBP8Q14318 412 aa11.87□□□□□ -0.51
EFCAB6-206ENST00000468552 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
EFCAB6-206ENST00000468552 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.87□□□□□ -0.51
EFCAB6-206ENST00000468552 NBR1Q14596 966 aa11.84□□□□□ -0.51
EFCAB6-206ENST00000468552 NCLP19338 710 aaKnown RBP11.82□□□□□ -0.52
EFCAB6-206ENST00000468552 CCDC136Q96JN2 1154 aa11.8□□□□□ -0.52
EFCAB6-206ENST00000468552 ERICH6BQ5W0A0 696 aa11.8□□□□□ -0.52
EFCAB6-206ENST00000468552 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
EFCAB6-206ENST00000468552 GOLGA6L22H0YM25 854 aa11.79□□□□□ -0.52
EFCAB6-206ENST00000468552 BECN1Q14457 450 aa11.78□□□□□ -0.52
EFCAB6-206ENST00000468552 ARXQ96QS3 562 aa11.78□□□□□ -0.52
EFCAB6-206ENST00000468552 HNRNPUQ00839 825 aaKnown RBP eCLIP11.74□□□□□ -0.53
EFCAB6-206ENST00000468552 PTMAP06454 111 aaKnown RBP11.72□□□□□ -0.53
EFCAB6-206ENST00000468552 MYH16Q9H6N6 1097 aa11.71□□□□□ -0.53
EFCAB6-206ENST00000468552 ZRSR1Q15695 479 aaKnown RBP11.71□□□□□ -0.54
EFCAB6-206ENST00000468552 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
EFCAB6-206ENST00000468552 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
EFCAB6-206ENST00000468552 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
EFCAB6-206ENST00000468552 NAP1L5Q96NT1 182 aaPredicted RBP11.65□□□□□ -0.54
EFCAB6-206ENST00000468552 FAM9BQ8IZU0 186 aa11.65□□□□□ -0.54
EFCAB6-206ENST00000468552 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
EFCAB6-206ENST00000468552 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
EFCAB6-206ENST00000468552 NRDCO43847 1150 aa11.62□□□□□ -0.55
EFCAB6-206ENST00000468552 WDR43Q15061 677 aaKnown RBP eCLIP11.62□□□□□ -0.55
EFCAB6-206ENST00000468552 ABCC9O60706 1549 aa11.62□□□□□ -0.55
EFCAB6-206ENST00000468552 TONSLQ96HA7 1378 aa11.62□□□□□ -0.55
EFCAB6-206ENST00000468552 CHAF1AQ13111 956 aaPredicted RBP11.57□□□□□ -0.56
EFCAB6-206ENST00000468552 CASC1Q6TDU7 716 aa11.56□□□□□ -0.56
EFCAB6-206ENST00000468552 ESF1Q9H501 851 aaKnown RBP11.56□□□□□ -0.56
EFCAB6-206ENST00000468552 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
EFCAB6-206ENST00000468552 L1TD1Q5T7N2 865 aaKnown RBP11.55□□□□□ -0.56
EFCAB6-206ENST00000468552 SALL2Q9Y467 1007 aaPredicted RBP11.55□□□□□ -0.56
EFCAB6-206ENST00000468552 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
EFCAB6-206ENST00000468552 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
EFCAB6-206ENST00000468552 NACADO15069 1562 aa11.49□□□□□ -0.57
EFCAB6-206ENST00000468552 MYO15BQ96JP2 1530 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms